Thhalv10004763m.g (Eutrema salsugineum)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 Thhalv10004763m.g T350649_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10004763m Whirly 96 232

Links

Other Whirly family TFs
Other Eutrema salsugineum TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo7g080560 Brassica oleracea Bo7g080560 N 0.985
Bra024809 Brassica rapa Bra024809 N 0.985
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.978
WHY3 Arabidopsis thaliana AT2G02740 N 0.978
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N 0.963
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.949
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.949
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N 0.912
Bra016702 Brassica rapa Bra016702 N 0.912
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.904
WHY1 Arabidopsis thaliana AT1G14410 N 0.904
Bo8g066030 Brassica oleracea Bo8g066030 N 0.904
Carubv10010024m.g Capsella rubella Carubv10010024m.g N 0.897
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N 0.882
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.868
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N 0.868
Pm006558 Prunus mume Pm006558 N 0.860
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N 0.860
MDP0000268451 Malus domestica MDP0000268451 N 0.853
29736.m002027 Ricinus communis 29736.m002027 N 0.853
mgf002465m Mimulus guttatus mgf002465m N 0.846
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.846
Cla022217 Citrullus lanatus Cla022217 N 0.846
TCM_011795 Theobroma cacao TCM_011795 N 0.838
PK22670.1 Cannabis sativa PK22670.1 N 0.831
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N 0.831
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 0.831
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N 0.831
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N 0.824
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N 0.824
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.824
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N 0.816
Lus10036723.g Linum usitatissimum Lus10036723.g N 0.816
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N 0.816
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.809
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.809
Cucsa.005520 Cucumis sativus Cucsa.005520 N 0.809
LjSGA_035916.1.1 Lotus japonicus LjSGA_035916.1.1 N 0.792
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.779
Ca_24297 Cicer arietinum Ca_24297 N 0.765
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.765
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N 0.765
Si006951m.g Setaria italica Si006951m.g N 0.765
Sb10g003170 Sorghum bicolor Sb10g003170 N 0.757
MLOC_11586 Hordeum vulgare MLOC_11586 N 0.757
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N 0.757
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N 0.757
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N 0.757
GRMZM2G155662 Zea mays GRMZM2G155662 N 0.750
Traes_7AS_45F0BB787 Triticum aestivum Traes_7AS_45F0BB787 N 0.750
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N 0.750
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N 0.736
BGIOSGA022297 Oryza indica BGIOSGA022297 N 0.735
OMERI07G11550 Oryza meridionalis OMERI07G11550 N 0.735
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N 0.735
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N 0.735
OS06G0145800 Oryza sativa OS06G0145800 N 0.735
LPERR06G02670 Leersia perrieri LPERR06G02670 N 0.735
OPUNC06G02750 Oryza punctata OPUNC06G02750 N 0.735
ONIVA06G03980 Oryza nivara ONIVA06G03980 N 0.735
OBART06G03050 Oryza barthii OBART06G03050 N 0.735
OMERI06G03280 Oryza meridionalis OMERI06G03280 N 0.735
LjSGA_053590.1 Lotus japonicus LjSGA_053590.1 N 0.732
PDK_20s1701491g001 Phoenix dactylifera PDK_20s1701491g001 N 0.730
MTR_8g468570 Medicago truncatula MTR_8g468570 N 0.706