LjSGA_035916.1.1 (Lotus japonicus)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 LjSGA_035916.1.1 T350659_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_035916.1.1 Whirly 1 53

Links

Other Whirly family TFs
Other Lotus japonicus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.868
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.849
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.849
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.830
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N 0.830
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.811
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.811
Pm006558 Prunus mume Pm006558 N 0.792
Bo7g080560 Brassica oleracea Bo7g080560 N 0.792
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.792
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 0.792
Bra024809 Brassica rapa Bra024809 N 0.792
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.792
WHY3 Arabidopsis thaliana AT2G02740 N 0.792
Lus10036723.g Linum usitatissimum Lus10036723.g N 0.792
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N 0.792
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N 0.792
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.792
Bra016702 Brassica rapa Bra016702 N 0.792
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N 0.792
MTR_8g468570 Medicago truncatula MTR_8g468570 N 0.774
Cla022217 Citrullus lanatus Cla022217 N 0.774
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.755
TCM_011795 Theobroma cacao TCM_011795 N 0.755
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.755
Cucsa.005520 Cucumis sativus Cucsa.005520 N 0.755
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N 0.755
OMERI07G11550 Oryza meridionalis OMERI07G11550 N 0.736
Traes_7AS_45F0BB787 Triticum aestivum Traes_7AS_45F0BB787 N 0.736
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N 0.736