CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT2G42040
(
Arabidopsis thaliana
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
AT2G42040
T350686_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42040
M01088_2.00
Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN
PBM
Sullivan et al.(2014)
pTH7503
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01088_2.00
WRC
52
93
EEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRVRSMNKS
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G42040.1
WRC
164
205
EEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRVRSMNKS
Links
Other
WRC
family TFs
Other
Arabidopsis thaliana
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy