AT2G42040 (Arabidopsis thaliana)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 AT2G42040 T350686_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and, together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G42040
M01088_2.00
Arabidopsis thaliana
NBTRCACYNN

NNRGTGYAVN
PBM
Sullivan et al.(2014)
pTH7503
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01088_2.00 WRC 52 93

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G42040.1 WRC 164 205

Links

Other WRC family TFs
Other Arabidopsis thaliana TFs

Invalid Input OrderBy

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action