CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRF9
(
Arabidopsis thaliana
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
AT2G45480
T350687_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GRF9
M07370_2.00
Arabidopsis thaliana
NTGTCAGANNHNNVH
DBNNDNNTCTGACAN
Dap-seq
OMalley et al.(2016)
GRF9_col_a
(Direct)
(Direct)
GRF9
M07371_2.00
Arabidopsis thaliana
TGTCAGAN
NTCTGACA
Dap-seq
OMalley et al.(2016)
GRF9_colamp_a
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G45480.1
WRC
88
130
TEPTRCRRTDGKKWRCSNTVLLFEKYCERHMHRGRKRSRKLVE
AT2G45480.1
WRC
306
347
NEPGRCRRTDGKKWRCSKDVLSGQKYCDKHMHRGMKKKHPVD
AT2G45480.2
WRC
90
132
TEPTRCRRTDGKKWRCSNTVLLFEKYCERHMHRGRKRSRKLVE
AT2G45480.3
WRC
90
132
TEPTRCRRTDGKKWRCSNTVLLFEKYCERHMHRGRKRSRKLVE
AT2G45480.3
WRC
308
349
NEPGRCRRTDGKKWRCSKDVLSGQKYCDKHMHRGMKKKHPVD
Links
Other
WRC
family TFs
Other
Arabidopsis thaliana
TFs
374 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy