CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AtGRF9
(
Arabidopsis lyrata
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
fgenesh1_pm.C_scaffold_4002259
T350809_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GRF9
M07370_2.00
Arabidopsis thaliana
NTGTCAGANNHNNVH
DBNNDNNTCTGACAN
Dap-seq
OMalley et al.(2016)
GRF9_col_a
0.929
0.929
GRF9
M07371_2.00
Arabidopsis thaliana
TGTCAGAN
NTCTGACA
Dap-seq
OMalley et al.(2016)
GRF9_colamp_a
0.929
0.929
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.C_scaffold_4002259
WRC
90
132
PEPTRCRRTDGKKWRCRNRVLLYEKYCERHMHRGRKRSRKLVE
fgenesh1_pm.C_scaffold_4002259
WRC
312
353
NEPGRCRRTDGKKWRCSKDALSGQKYCDKHMHRGIKKKHPVD
Links
Other
WRC
family TFs
Other
Arabidopsis lyrata
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy