CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.4__2350__AT2G42040.1
(
Arabidopsis lyrata
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
fgenesh2_kg.4__2350__AT2G42040.1
T350816_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42040
M01088_2.00
Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN
PBM
Sullivan et al.(2014)
pTH7503
1.000
1.000
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.4__2350__AT2G42040.1
WRC
164
205
EEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRVRSMNKS
Links
Other
WRC
family TFs
Other
Arabidopsis lyrata
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy