OLONG_003473 (Oryza longistaminata)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 OLONG_003473 T351037_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtGRF6
M02545_2.00
Arabidopsis thaliana
NNNNYDNN

NNHRNNNN
PBM
Weirauch et al.(2014)
pTH7356
0.750 0.750
AtGRF6
M07369_2.00
Arabidopsis thaliana
NNNNNHNTGTCAGA

TCTGACANDNNNNN
Dap-seq
OMalley et al.(2016)
AtGRF6_col_a
0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_003473-R1 WRC 97 128

Links

Other WRC family TFs
Other Oryza longistaminata TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NAC029 Arabidopsis thaliana AT1G69490 D 0.000
Traes_5BL_CC18CAD72 Triticum aestivum Traes_5BL_CC18CAD72 D 0.000
NAP Vitis vinifera VIT_01s0026g02710 I 0.000
Cla010367 Citrullus lanatus Cla010367 I 0.000
Pm006470 Prunus mume Pm006470 I 0.000
29648.m002012 Ricinus communis 29648.m002012 I 0.000
29813.m001519 Ricinus communis 29813.m001519 I 0.000
cassava1317.valid.m1 Manihot esculenta cassava1317.valid.m1 I 0.000
Cucsa.284890 Cucumis sativus Cucsa.284890 I 0.000
e_gw1.15.275.1 Physcomitrella patens e_gw1.15.275.1 I 0.000
TCM_011671 Theobroma cacao TCM_011671 I 0.000
Solyc05g007770.2 Solanum lycopersicum Solyc05g007770.2 I 0.000
Si030267m.g Setaria italica Si030267m.g I 0.000
POPTR_0005s20240 Populus trichocarpa POPTR_0005s20240 I 0.000
POPTR_0008s08850 Populus trichocarpa POPTR_0008s08850 I 0.000
PRUPE_ppa009530mg Prunus persica PRUPE_ppa009530mg I 0.000
Sb05g001580 Sorghum bicolor Sb05g001580 I 0.000
Sb08g001940 Sorghum bicolor Sb08g001940 I 0.000
SELMODRAFT_133982 Selaginella moellendorffii SELMODRAFT_133982 I 0.000
SELMODRAFT_47266 Selaginella moellendorffii SELMODRAFT_47266 I 0.000
Si010410m.g Setaria italica Si010410m.g I 0.000
Si026530m.g Setaria italica Si026530m.g I 0.000
e_gw1.259.28.1 Physcomitrella patens e_gw1.259.28.1 I 0.000
mgf022118m Mimulus guttatus mgf022118m I 0.000
Bostr.10273s0418 Boechera stricta Bostr.10273s0418 I 0.000
MDP0000481448 Malus domestica MDP0000481448 I 0.000
orange1.1g023197m.g Citrus sinensis orange1.1g023197m.g I 0.000
Pavir.Bb03737 Panicum virgatum Pavir.Bb03737 I 0.000
Pavir.Ea00837 Panicum virgatum Pavir.Ea00837 I 0.000
Pavir.J23256 Panicum virgatum Pavir.J23256 I 0.000
Pavir.J23516 Panicum virgatum Pavir.J23516 I 0.000
SapurV1A.0801s0090 Salix purpurea SapurV1A.0801s0090 I 0.000
Thhalv10018997m.g Eutrema salsugineum Thhalv10018997m.g I 0.000
PK25119.1 Cannabis sativa PK25119.1 I 0.000
MDP0000262990 Malus domestica MDP0000262990 I 0.000
Lus10037156.g Linum usitatissimum Lus10037156.g I 0.000
Cagra.0887s0008 Capsella grandiflora Cagra.0887s0008 I 0.000
Carubv10020776m.g Capsella rubella Carubv10020776m.g I 0.000
Ciclev10032304m.g Citrus clementina Ciclev10032304m.g I 0.000
Eucgr.G02486 Eucalyptus grandis Eucgr.G02486 I 0.000
Gorai.005G142300 Gossypium raimondii Gorai.005G142300 I 0.000
Gorai.008G179900 Gossypium raimondii Gorai.008G179900 I 0.000
Lus10026617.g Linum usitatissimum Lus10026617.g I 0.000
Lus10030446.g Linum usitatissimum Lus10030446.g I 0.000
Lus10036773.g Linum usitatissimum Lus10036773.g I 0.000
chr1.CM0104.240.nc Lotus japonicus chr1.CM0104.240.nc I 0.000
BGIOSGA034713 Oryza indica BGIOSGA034713 I 0.000
GLYMA20G04400 Glycine max GLYMA20G04400 I 0.000
GRMZM2G109627 Zea mays GRMZM2G109627 I 0.000
GRMZM2G127379 Zea mays GRMZM2G127379 I 0.000
GRMZM2G430849 Zea mays GRMZM2G430849 I 0.000
GSMUA_Achr10G12860_001 Musa acuminata GSMUA_Achr10G12860_001 I 0.000
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.000
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.000
GSMUA_Achr6G32330_001 Musa acuminata GSMUA_Achr6G32330_001 I 0.000
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.000
GLYMA07G35630 Glycine max GLYMA07G35630 I 0.000
GLYMA02G26480 Glycine max GLYMA02G26480 I 0.000
BGIOSGA036918 Oryza indica BGIOSGA036918 I 0.000
BGIOSGA036920 Oryza indica BGIOSGA036920 I 0.000
Bo6g095510 Brassica oleracea Bo6g095510 I 0.000
Bo6g108930 Brassica oleracea Bo6g108930 I 0.000
Bra004385 Brassica rapa Bra004385 I 0.000
F775_26965 Aegilops tauschii F775_26965 I 0.000
NAP Arabidopsis lyrata fgenesh2_kg.2__1206__AT1G69490.1 I 0.000
GLYMA01G06150 Glycine max GLYMA01G06150 I 0.000
GLYMA02G12220 Glycine max GLYMA02G12220 I 0.000
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I 0.000
LPERR11G01300 Leersia perrieri LPERR11G01300 I 0.000
LPERR12G01440 Leersia perrieri LPERR12G01440 I 0.000
ONIVA11G01630 Oryza nivara ONIVA11G01630 I 0.000
OPUNC07G07310 Oryza punctata OPUNC07G07310 I 0.000
OPUNC11G01330 Oryza punctata OPUNC11G01330 I 0.000
ORGLA12G0011400 Oryza glaberrima ORGLA12G0011400 I 0.000
ORUFI12G01570 Oryza rufipogon ORUFI12G01570 I 0.000
OS11G0126900 Oryza sativa OS11G0126900 I 0.000
OS12G0123700 Oryza sativa OS12G0123700 I 0.000
PGSC0003DMG400002824 Solanum tuberosum PGSC0003DMG400002824 I 0.000
PGSC0003DMG400018435 Solanum tuberosum PGSC0003DMG400018435 I 0.000
OMERI12G00480 Oryza meridionalis OMERI12G00480 I 0.000
OLONG_026749 Oryza longistaminata OLONG_026749 I 0.000
MLOC_4747 Hordeum vulgare MLOC_4747 I 0.000
MTR_4g081870 Medicago truncatula MTR_4g081870 I 0.000
OB11G11210 Oryza brachyantha OB11G11210 I 0.000
OB12G11500 Oryza brachyantha OB12G11500 I 0.000
OBART11G01590 Oryza barthii OBART11G01590 I 0.000
OBART12G01290 Oryza barthii OBART12G01290 I 0.000
OGLUM11G01310 Oryza glumaepatula OGLUM11G01310 I 0.000
OGLUM12G01870 Oryza glumaepatula OGLUM12G01870 I 0.000
OLONG_020632 Oryza longistaminata OLONG_020632 I 0.000
POPTR_0002s08150 Populus trichocarpa POPTR_0002s08150 I 0.000