cassava28657.m1 (Manihot esculenta)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 cassava28657.m1 T351442_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GRF9
M07370_2.00
Arabidopsis thaliana
NTGTCAGANNHNNVH

DBNNDNNTCTGACAN
Dap-seq
OMalley et al.(2016)
GRF9_col_a
0.706 0.706
GRF9
M07371_2.00
Arabidopsis thaliana
TGTCAGAN

NTCTGACA
Dap-seq
OMalley et al.(2016)
GRF9_colamp_a
0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava28657.m1 WRC 101 143
cassava28657.m1 WRC 306 347

Links

Other WRC family TFs
Other Manihot esculenta TFs

Invalid Input OrderBy

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action