CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_076_00086
(
Aquilegia coerulea
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08879 (WRC)
IPR014977
Aquca_076_00086
T351539_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtGRF6
M02545_2.00
Arabidopsis thaliana
NNNNYDNN
NNHRNNNN
PBM
Weirauch et al.(2014)
pTH7356
0.837
0.837
AtGRF6
M07369_2.00
Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN
Dap-seq
OMalley et al.(2016)
AtGRF6_col_a
0.837
0.837
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_076_00086.1
WRC
73
115
PEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE
Aquca_076_00086.2
WRC
73
115
PEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE
Aquca_076_00086.3
WRC
73
115
PEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE
Links
Other
WRC
family TFs
Other
Aquilegia coerulea
TFs
589 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy