CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.2455s0005
(
Capsella grandiflora
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08879 (WRC)
IPR014977
Cagra.2455s0005
T351562_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.2455s0005.1.p
WRC
8
50
PDEFRCNRSDGKQWRCKKRALEGKKMCEGHYSQQNRKRSTQKG
Links
Other
WRC
family TFs
Other
Capsella grandiflora
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10004087m.g
Capsella rubella
Carubv10004087m.g
N
1.000
B160
Arabidopsis thaliana
AT4G21430
N
0.837
B160
Arabidopsis lyrata
scaffold_702276.1
N
0.814
Bostr.10689s0088
Boechera stricta
Bostr.10689s0088
N
0.814
Bra038775
Brassica rapa
Bra038775
N
0.814
Bo7g107410
Brassica oleracea
Bo7g107410
N
0.791
Thhalv10024332m.g
Eutrema salsugineum
Thhalv10024332m.g
N
0.767
Bo1g024150
Brassica oleracea
Bo1g024150
N
0.744
Bra013525
Brassica rapa
Bra013525
N
0.744