Carubv10007298m.g (Capsella rubella)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Carubv10007298m.g T351569_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10007298m WRC 217 259

Links

Other WRC family TFs
Other Capsella rubella TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRF8 Arabidopsis thaliana AT4G24150 N 1.000
Bostr.7867s0220 Boechera stricta Bostr.7867s0220 N 1.000
AtGRF8 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001531 N 1.000
Cagra.1226s0080 Capsella grandiflora Cagra.1226s0080 N 1.000
Thhalv10025371m.g Eutrema salsugineum Thhalv10025371m.g N 0.953
PK26554.1 Cannabis sativa PK26554.1 N 0.930
Bra019244 Brassica rapa Bra019244 N 0.930
Bo1g037590 Brassica oleracea Bo1g037590 N 0.907
Bra013767 Brassica rapa Bra013767 N 0.907
Bo7g109350 Brassica oleracea Bo7g109350 N 0.907
SapurV1A.0094s0370 Salix purpurea SapurV1A.0094s0370 N 0.884
PRUPE_ppa019752mg Prunus persica PRUPE_ppa019752mg N 0.884
POPTR_0001s11480 Populus trichocarpa POPTR_0001s11480 N 0.884
mgf003183m Mimulus guttatus mgf003183m N 0.884
SapurV1A.0059s0450 Salix purpurea SapurV1A.0059s0450 N 0.884
Pm024257 Prunus mume Pm024257 N 0.884
30068.m002588 Ricinus communis 30068.m002588 N 0.884
SapurV1A.2815s0020 Salix purpurea SapurV1A.2815s0020 N 0.860
TCM_015625 Theobroma cacao TCM_015625 N 0.860
AtGRF8 Vitis vinifera VIT_02s0025g02680 N 0.860
PGSC0003DMG400012233 Solanum tuberosum PGSC0003DMG400012233 N 0.860
Lus10033236.g Linum usitatissimum Lus10033236.g N 0.860
Lus10008268.g Linum usitatissimum Lus10008268.g N 0.860
Solyc08g083230.1 Solanum lycopersicum Solyc08g083230.1 N 0.860
Aquca_076_00011 Aquilegia coerulea Aquca_076_00011 N 0.837
Ciclev10019828m.g Citrus clementina Ciclev10019828m.g N 0.837
Gorai.008G259500 Gossypium raimondii Gorai.008G259500 N 0.837
gene12741-v1.0-hybrid Fragaria vesca gene12741-v1.0-hybrid N 0.837
orange1.1g010979m.g Citrus sinensis orange1.1g010979m.g N 0.837
Pm019687 Prunus mume Pm019687 N 0.837
PGSC0003DMG400003220 Solanum tuberosum PGSC0003DMG400003220 N 0.837
PRUPE_ppa024293mg Prunus persica PRUPE_ppa024293mg N 0.837
Solyc03g082430.1 Solanum lycopersicum Solyc03g082430.1 N 0.837
SapurV1A.0326s0130 Salix purpurea SapurV1A.0326s0130 I 0.837
SapurV1A.0755s0030 Salix purpurea SapurV1A.0755s0030 N 0.837
cassava2869.m1 Manihot esculenta cassava2869.m1 N 0.837
MDP0000814056 Malus domestica MDP0000814056 N 0.837
PK14408.1 Cannabis sativa PK14408.1 N 0.837
POPTR_0012s02950 Populus trichocarpa POPTR_0012s02950 N 0.837
Pavir.Aa00919 Panicum virgatum Pavir.Aa00919 I 0.833
MDP0000261112 Malus domestica MDP0000261112 N 0.814
MDP0000322576 Malus domestica MDP0000322576 N 0.814
TCM_015497 Theobroma cacao TCM_015497 N 0.814
Eucgr.A01418 Eucalyptus grandis Eucgr.A01418 N 0.814
Ciclev10019529m.g Citrus clementina Ciclev10019529m.g N 0.814
POPTR_0015s00860 Populus trichocarpa POPTR_0015s00860 N 0.814
Eucgr.D01674 Eucalyptus grandis Eucgr.D01674 N 0.814
orange1.1g009918m.g Citrus sinensis orange1.1g009918m.g N 0.814
Traes_6BL_7462E6F9B Triticum aestivum Traes_6BL_7462E6F9B I 0.800
AMTR_s00018p00250840 Amborella trichopoda AMTR_s00018p00250840 N 0.791
evm.TU.supercontig_3.145 Carica papaya evm.TU.supercontig_3.145 N 0.791
29700.m000761 Ricinus communis 29700.m000761 I 0.791
MDP0000842815 Malus domestica MDP0000842815 N 0.791
mgf013307m Mimulus guttatus mgf013307m N 0.791
cassava17264.m1 Manihot esculenta cassava17264.m1 N 0.791
GRMZM5G893117 Zea mays GRMZM5G893117 I 0.769
GSMUA_Achr5G20170_001 Musa acuminata GSMUA_Achr5G20170_001 I 0.767
Ca_04035 Cicer arietinum Ca_04035 N 0.767
GSMUA_Achr11G21590_001 Musa acuminata GSMUA_Achr11G21590_001 I 0.767
Thhalv10013862m.g Eutrema salsugineum Thhalv10013862m.g N 0.767
Gorai.008G265600 Gossypium raimondii Gorai.008G265600 N 0.767
GRMZM2G067743 Zea mays GRMZM2G067743 I 0.750
Bo2g044580 Brassica oleracea Bo2g044580 N 0.744
Aquca_013_00537 Aquilegia coerulea Aquca_013_00537 I 0.744
Si034822m.g Setaria italica Si034822m.g N 0.744
Solyc02g092070.2 Solanum lycopersicum Solyc02g092070.2 N 0.744
F775_27966 Aegilops tauschii F775_27966 N 0.744
cassava35131.m1 Manihot esculenta cassava35131.m1 N 0.744
GLYMA04G40880 Glycine max GLYMA04G40880 N 0.744
Bra022667 Brassica rapa Bra022667 N 0.744
Pavir.J29705 Panicum virgatum Pavir.J29705 N 0.744
Sb01g009330 Sorghum bicolor Sb01g009330 N 0.744
PGSC0003DMG400021403 Solanum tuberosum PGSC0003DMG400021403 N 0.744
GLYMA06G13960 Glycine max GLYMA06G13960 N 0.744
Traes_4BS_1B1F669A3 Triticum aestivum Traes_4BS_1B1F669A3 N 0.744
VIT_02s0025g04910 Vitis vinifera VIT_02s0025g04910 I 0.744
Eucgr.A01534 Eucalyptus grandis Eucgr.A01534 N 0.744
GRMZM2G443903 Zea mays GRMZM2G443903 N 0.744
MLOC_67201 Hordeum vulgare MLOC_67201 N 0.744
AtGRF7 Vitis vinifera VIT_16s0098g01080 N 0.744
GSMUA_Achr8G07650_001 Musa acuminata GSMUA_Achr8G07650_001 N 0.744
GSMUA_Achr3G22790_001 Musa acuminata GSMUA_Achr3G22790_001 N 0.744
GRMZM2G178261 Zea mays GRMZM2G178261 N 0.744
GRMZM5G853392 Zea mays GRMZM5G853392 N 0.744
Pavir.J11763 Panicum virgatum Pavir.J11763 N 0.744
Traes_4AL_4954CD38D Triticum aestivum Traes_4AL_4954CD38D N 0.744
Traes_4DS_0FB3F3EE9 Triticum aestivum Traes_4DS_0FB3F3EE9 N 0.744
Traes_4DS_0FB3F3EE91 Triticum aestivum Traes_4DS_0FB3F3EE91 N 0.744
Pm026217 Prunus mume Pm026217 N 0.721
27496.m000094 Ricinus communis 27496.m000094 N 0.721
28976.m000158 Ricinus communis 28976.m000158 N 0.721
Thhalv10024915m.g Eutrema salsugineum Thhalv10024915m.g N 0.721
PDK_20s1348362g001 Phoenix dactylifera PDK_20s1348362g001 N 0.721
PK16254.1 Cannabis sativa PK16254.1 N 0.721
30190.m011066 Ricinus communis 30190.m011066 I 0.721
Thhalv10000124m.g Eutrema salsugineum Thhalv10000124m.g N 0.721
PK17885.1 Cannabis sativa PK17885.1 N 0.721
30170.m013673 Ricinus communis 30170.m013673 N 0.721
Cucsa.378420 Cucumis sativus Cucsa.378420 N 0.721
Carubv10026610m.g Capsella rubella Carubv10026610m.g N 0.721
Ciclev10011856m.g Citrus clementina Ciclev10011856m.g N 0.721
Carubv10022975m.g Capsella rubella Carubv10022975m.g N 0.721
Carubv10004544m.g Capsella rubella Carubv10004544m.g N 0.721
Cagra.4290s0006 Capsella grandiflora Cagra.4290s0006 N 0.721
Cagra.9757s0010 Capsella grandiflora Cagra.9757s0010 N 0.721
Ciclev10022033m.g Citrus clementina Ciclev10022033m.g I 0.721
Cla017990 Citrullus lanatus Cla017990 N 0.721
Lus10014380.g Linum usitatissimum Lus10014380.g N 0.721
Lus10019274.g Linum usitatissimum Lus10019274.g N 0.721
Lus10011558.g Linum usitatissimum Lus10011558.g N 0.721
Gorai.009G406500 Gossypium raimondii Gorai.009G406500 N 0.721
evm.TU.supercontig_5.63 Carica papaya evm.TU.supercontig_5.63 N 0.721
Cagra.2460s0032 Capsella grandiflora Cagra.2460s0032 N 0.721
orange1.1g028751m.g Citrus sinensis orange1.1g028751m.g I 0.721
cassava37892.valid.m1 Manihot esculenta cassava37892.valid.m1 N 0.721
cassava7966.valid.m1 Manihot esculenta cassava7966.valid.m1 N 0.721
cassava32870.m1 Manihot esculenta cassava32870.m1 N 0.721
Pavir.Db02421 Panicum virgatum Pavir.Db02421 I 0.721
Pavir.Hb00712 Panicum virgatum Pavir.Hb00712 N 0.721
cassava30116.valid.m1 Manihot esculenta cassava30116.valid.m1 I 0.721
MDP0000808163 Malus domestica MDP0000808163 N 0.721
mgf011630m Mimulus guttatus mgf011630m N 0.721
Bostr.26833s0909 Boechera stricta Bostr.26833s0909 N 0.721
Bostr.7867s1635 Boechera stricta Bostr.7867s1635 N 0.721
Bostr.19427s0054 Boechera stricta Bostr.19427s0054 N 0.721
Aquca_122_00004 Aquilegia coerulea Aquca_122_00004 N 0.721
Pavir.Da02366 Panicum virgatum Pavir.Da02366 I 0.721
Pavir.J06517 Panicum virgatum Pavir.J06517 N 0.721
Sb04g031890 Sorghum bicolor Sb04g031890 N 0.721
GSMUA_Achr7G27480_001 Musa acuminata GSMUA_Achr7G27480_001 N 0.721
GSMUA_Achr8G04970_001 Musa acuminata GSMUA_Achr8G04970_001 N 0.721
GSMUA_Achr8G12060_001 Musa acuminata GSMUA_Achr8G12060_001 N 0.721
GSMUA_Achr8G26530_001 Musa acuminata GSMUA_Achr8G26530_001 N 0.721
GSMUA_Achr4G32310_001 Musa acuminata GSMUA_Achr4G32310_001 N 0.721
GSMUA_Achr3G15140_001 Musa acuminata GSMUA_Achr3G15140_001 N 0.721
GRMZM2G045977 Zea mays GRMZM2G045977 N 0.721
GRMZM2G098594 Zea mays GRMZM2G098594 I 0.721
GRMZM2G124566 Zea mays GRMZM2G124566 N 0.721
GSMUA_AchrUn_randomG15490_001 Musa acuminata GSMUA_AchrUn_randomG15490_001 N 0.721
LPERR03G27480 Leersia perrieri LPERR03G27480 N 0.721
OB12G20240 Oryza brachyantha OB12G20240 N 0.721
OBART03G32870 Oryza barthii OBART03G32870 N 0.721
OBART06G01070 Oryza barthii OBART06G01070 I 0.721
OB11G22890 Oryza brachyantha OB11G22890 N 0.721
OB06G11200 Oryza brachyantha OB06G11200 I 0.721
LPERR06G01000 Leersia perrieri LPERR06G01000 I 0.721
LPERR11G13310 Leersia perrieri LPERR11G13310 N 0.721
LPERR12G10130 Leersia perrieri LPERR12G10130 N 0.721
GLYMA19G37740 Glycine max GLYMA19G37740 N 0.721
GLYMA03G35010 Glycine max GLYMA03G35010 N 0.721
BGIOSGA035433 Oryza indica BGIOSGA035433 N 0.721
BGIOSGA037400 Oryza indica BGIOSGA037400 N 0.721
Bo3g042310 Brassica oleracea Bo3g042310 N 0.721
BGIOSGA022056 Oryza indica BGIOSGA022056 I 0.721
BGIOSGA013499 Oryza indica BGIOSGA013499 N 0.721
AMTR_s00048p00216350 Amborella trichopoda AMTR_s00048p00216350 I 0.721
GRF1 Arabidopsis thaliana AT2G22840 N 0.721
GRF2 Arabidopsis thaliana AT4G37740 N 0.721
Bo4g122960 Brassica oleracea Bo4g122960 N 0.721
Bo7g118730 Brassica oleracea Bo7g118730 N 0.721
BRADI4G16450 Brachypodium distachyon BRADI4G16450 N 0.721
F775_19681 Aegilops tauschii F775_19681 I 0.721
AtGRF1 Arabidopsis lyrata fgenesh2_kg.4__207__AT2G22840.1 N 0.721
BRADI1G50597 Brachypodium distachyon BRADI1G50597 I 0.721
BRADI1G09900 Brachypodium distachyon BRADI1G09900 N 0.721
Bra000575 Brassica rapa Bra000575 N 0.721
Bra005268 Brassica rapa Bra005268 N 0.721
Bra017851 Brassica rapa Bra017851 N 0.721
Ca_00772 Cicer arietinum Ca_00772 N 0.721
OBART11G16830 Oryza barthii OBART11G16830 N 0.721
ORUFI12G13380 Oryza rufipogon ORUFI12G13380 N 0.721
OS03G0729500 Oryza sativa OS03G0729500 N 0.721
OS12G0484900 Oryza sativa OS12G0484900 N 0.721
PGSC0003DMG400028259 Solanum tuberosum PGSC0003DMG400028259 N 0.721
ORUFI11G17860 Oryza rufipogon ORUFI11G17860 N 0.721
ORUFI06G01080 Oryza rufipogon ORUFI06G01080 I 0.721
ORGLA06G0010200 Oryza glaberrima ORGLA06G0010200 I 0.721
ORGLA11G0141300 Oryza glaberrima ORGLA11G0141300 N 0.721
ORUFI03G34250 Oryza rufipogon ORUFI03G34250 N 0.721
POPTR_0001s08310 Populus trichocarpa POPTR_0001s08310 N 0.721
PRUPE_ppa006912mg Prunus persica PRUPE_ppa006912mg N 0.721
TCM_022490 Theobroma cacao TCM_022490 N 0.721
TRIUR3_01357 Triticum urartu TRIUR3_01357 I 0.721
VIT_08s0007g03760 Vitis vinifera VIT_08s0007g03760 N 0.721
Solyc10g083510.1 Solanum lycopersicum Solyc10g083510.1 N 0.721
Si018252m.g Setaria italica Si018252m.g N 0.721
AtGRF2 Arabidopsis lyrata Al_scaffold_0007_269 N 0.721
Sb10g001350 Sorghum bicolor Sb10g001350 I 0.721
Si008818m.g Setaria italica Si008818m.g I 0.721
ORGLA03G0298100 Oryza glaberrima ORGLA03G0298100 N 0.721
OPUNC12G10860 Oryza punctata OPUNC12G10860 N 0.721
OLONG_020244 Oryza longistaminata OLONG_020244 N 0.721
OMERI03G29560 Oryza meridionalis OMERI03G29560 N 0.721
OMERI04G16620 Oryza meridionalis OMERI04G16620 N 0.721
OLONG_005678 Oryza longistaminata OLONG_005678 N 0.721
OGLUM12G13820 Oryza glumaepatula OGLUM12G13820 N 0.721
OGLUM03G32510 Oryza glumaepatula OGLUM03G32510 N 0.721
OGLUM06G01060 Oryza glumaepatula OGLUM06G01060 I 0.721
OGLUM11G16300 Oryza glumaepatula OGLUM11G16300 N 0.721
OBART12G12240 Oryza barthii OBART12G12240 N 0.721
OMERI06G01060 Oryza meridionalis OMERI06G01060 I 0.721
ONIVA12G12410 Oryza nivara ONIVA12G12410 N 0.721
OPUNC03G30000 Oryza punctata OPUNC03G30000 N 0.721
OPUNC06G01050 Oryza punctata OPUNC06G01050 I 0.721
OMERI12G08740 Oryza meridionalis OMERI12G08740 N 0.721
ONIVA11G16660 Oryza nivara ONIVA11G16660 N 0.721
ONIVA03G34380 Oryza nivara ONIVA03G34380 N 0.721
ONIVA06G01450 Oryza nivara ONIVA06G01450 I 0.721
OPUNC11G13830 Oryza punctata OPUNC11G13830 N 0.721
OB03G39940 Oryza brachyantha OB03G39940 I 0.704