Pavir.Ba01449 (Panicum virgatum)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 Pavir.Ba01449 T351719_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba01449.1.p WRC 173 215

Links

Other WRC family TFs
Other Panicum virgatum TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Si030809m.g Setaria italica Si030809m.g N 1.000
GRMZM5G893117 Zea mays GRMZM5G893117 I 1.000
Pavir.Bb02610 Panicum virgatum Pavir.Bb02610 N 1.000
Traes_6BL_7462E6F9B Triticum aestivum Traes_6BL_7462E6F9B I 1.000
Sb02g032860 Sorghum bicolor Sb02g032860 N 0.976
TRIUR3_26160 Triticum urartu TRIUR3_26160 N 0.951
MLOC_70581 Hordeum vulgare MLOC_70581 N 0.951
Traes_2AS_CA4D79100 Triticum aestivum Traes_2AS_CA4D79100 N 0.951
Traes_2BS_E3CBE0B73 Triticum aestivum Traes_2BS_E3CBE0B73 N 0.951
F775_29935 Aegilops tauschii F775_29935 N 0.951
Traes_2DL_243DA9D84 Triticum aestivum Traes_2DL_243DA9D84 N 0.951
Pavir.Aa00919 Panicum virgatum Pavir.Aa00919 I 0.944
OMERI07G10850 Oryza meridionalis OMERI07G10850 N 0.930
OLONG_025015 Oryza longistaminata OLONG_025015 N 0.930
OGLUM07G12780 Oryza glumaepatula OGLUM07G12780 N 0.930
OBART07G13680 Oryza barthii OBART07G13680 N 0.930
OMERI08G17030 Oryza meridionalis OMERI08G17030 N 0.930
ORUFI07G13880 Oryza rufipogon ORUFI07G13880 N 0.930
ORGLA07G0115500 Oryza glaberrima ORGLA07G0115500 N 0.930
OPUNC07G12320 Oryza punctata OPUNC07G12320 N 0.930
GRF11 Oryza sativa OS07G0467500 N 0.930
ONIVA07G11690 Oryza nivara ONIVA07G11690 N 0.930
OB07G19720 Oryza brachyantha OB07G19720 N 0.930
BRADI1G28400 Brachypodium distachyon BRADI1G28400 N 0.930
BGIOSGA025662 Oryza indica BGIOSGA025662 N 0.930
GRMZM2G004619 Zea mays GRMZM2G004619 N 0.930
BRADI2G14320 Brachypodium distachyon BRADI2G14320 N 0.930
LPERR07G11440 Leersia perrieri LPERR07G11440 N 0.930
GRMZM2G096709 Zea mays GRMZM2G096709 N 0.907
GRMZM2G067743 Zea mays GRMZM2G067743 I 0.850
GSMUA_Achr8G12060_001 Musa acuminata GSMUA_Achr8G12060_001 N 0.767
GLYMA04G40880 Glycine max GLYMA04G40880 N 0.744
GLYMA06G13960 Glycine max GLYMA06G13960 N 0.744
cassava30116.valid.m1 Manihot esculenta cassava30116.valid.m1 I 0.721
Ciclev10022033m.g Citrus clementina Ciclev10022033m.g I 0.721
Aquca_122_00004 Aquilegia coerulea Aquca_122_00004 N 0.721
Eucgr.A01534 Eucalyptus grandis Eucgr.A01534 N 0.721
AMTR_s00048p00216350 Amborella trichopoda AMTR_s00048p00216350 I 0.721
Gorai.008G241800 Gossypium raimondii Gorai.008G241800 I 0.721
Gorai.004G204600 Gossypium raimondii Gorai.004G204600 I 0.721
evm.TU.supercontig_3.145 Carica papaya evm.TU.supercontig_3.145 N 0.721
30190.m011066 Ricinus communis 30190.m011066 I 0.721
Bra005268 Brassica rapa Bra005268 N 0.721
PRUPE_ppa019623mg Prunus persica PRUPE_ppa019623mg N 0.721
GSMUA_Achr11G21590_001 Musa acuminata GSMUA_Achr11G21590_001 I 0.721
GSMUA_Achr5G20170_001 Musa acuminata GSMUA_Achr5G20170_001 I 0.721
AMTR_s00018p00250840 Amborella trichopoda AMTR_s00018p00250840 N 0.721
TCM_016120 Theobroma cacao TCM_016120 I 0.721
Ca_04035 Cicer arietinum Ca_04035 N 0.721
Pm005437 Prunus mume Pm005437 N 0.721
AtGRF7 Vitis vinifera VIT_16s0098g01080 N 0.721
OB02G35150 Oryza brachyantha OB02G35150 N 0.704
OB03G39940 Oryza brachyantha OB03G39940 I 0.704