PK07653.1 (Cannabis sativa)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 PK07653.1 T351797_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GRF9
M07370_2.00
Arabidopsis thaliana
NTGTCAGANNHNNVH

DBNNDNNTCTGACAN
Dap-seq
OMalley et al.(2016)
GRF9_col_a
0.733 0.733
GRF9
M07371_2.00
Arabidopsis thaliana
TGTCAGAN

NTCTGACA
Dap-seq
OMalley et al.(2016)
GRF9_colamp_a
0.733 0.733
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK07653.1 WRC 112 154
PK07653.1 WRC 300 342

Links

Other WRC family TFs
Other Cannabis sativa TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_005483 Theobroma cacao TCM_005483 I 0.895
Cucsa.257800 Cucumis sativus Cucsa.257800 N 0.849
AtGRF9 Vitis vinifera VIT_15s0048g01740 I 0.849
Gorai.007G092400 Gossypium raimondii Gorai.007G092400 N 0.837
Cla021612 Citrullus lanatus Cla021612 N 0.837
PRUPE_ppa021277mg Prunus persica PRUPE_ppa021277mg N 0.826
Pm017948 Prunus mume Pm017948 N 0.826
MDP0000204597 Malus domestica MDP0000204597 N 0.802
cassava28657.m1 Manihot esculenta cassava28657.m1 I 0.800
POPTR_0014s06750 Populus trichocarpa POPTR_0014s06750 I 0.800
SapurV1A.0532s0070 Salix purpurea SapurV1A.0532s0070 N 0.779
cassava36905.valid.m1 Manihot esculenta cassava36905.valid.m1 N 0.767
30174.m008910 Ricinus communis 30174.m008910 N 0.762
Bostr.25993s0227 Boechera stricta Bostr.25993s0227 I 0.753
Cagra.0698s0014 Capsella grandiflora Cagra.0698s0014 I 0.744
Carubv10023501m.g Capsella rubella Carubv10023501m.g I 0.744
Bo4g195580 Brassica oleracea Bo4g195580 I 0.744
Bra039334 Brassica rapa Bra039334 I 0.744
Ca_19588 Cicer arietinum Ca_19588 I 0.744
GRF9 Arabidopsis thaliana AT2G45480 D 0.741
Thhalv10001460m.g Eutrema salsugineum Thhalv10001460m.g I 0.741
MTR_8g035910 Medicago truncatula MTR_8g035910 N 0.733
GLYMA01G34650 Glycine max GLYMA01G34650 N 0.733
GLYMA03G02500 Glycine max GLYMA03G02500 N 0.733
AtGRF9 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002259 I 0.729
gene19384-v1.0-hybrid Fragaria vesca gene19384-v1.0-hybrid N 0.721