PDK_20s1464921g001 (Phoenix dactylifera)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 PDK_20s1464921g001 T351827_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.760 0.760
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.760 0.760
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1464921g001 WRC 119 143

Links

Other WRC family TFs
Other Phoenix dactylifera TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Aa00919 Panicum virgatum Pavir.Aa00919 I 0.944
Traes_6BL_7462E6F9B Triticum aestivum Traes_6BL_7462E6F9B I 0.933
GRMZM5G893117 Zea mays GRMZM5G893117 I 0.923
Aquca_006_00049 Aquilegia coerulea Aquca_006_00049 N 0.920
POPTR_0002s11590 Populus trichocarpa POPTR_0002s11590 N 0.920
Aquca_037_00140 Aquilegia coerulea Aquca_037_00140 N 0.920
POPTR_0014s01320 Populus trichocarpa POPTR_0014s01320 N 0.920
cassava22415.valid.m1 Manihot esculenta cassava22415.valid.m1 N 0.920
VIT_18s0001g08650 Vitis vinifera VIT_18s0001g08650 N 0.920
Cla022992 Citrullus lanatus Cla022992 N 0.920
PGSC0003DMG400004942 Solanum tuberosum PGSC0003DMG400004942 N 0.920
POPTR_0007s14720 Populus trichocarpa POPTR_0007s14720 N 0.920
Cucsa.395430 Cucumis sativus Cucsa.395430 N 0.920
Solyc04g077510.2 Solanum lycopersicum Solyc04g077510.2 N 0.920
Gorai.010G027700 Gossypium raimondii Gorai.010G027700 N 0.920
TCM_034655 Theobroma cacao TCM_034655 N 0.920
Gorai.005G098700 Gossypium raimondii Gorai.005G098700 N 0.920
Gorai.009G222200 Gossypium raimondii Gorai.009G222200 N 0.920
SapurV1A.0608s0150 Salix purpurea SapurV1A.0608s0150 N 0.920
AMTR_s00065p00092420 Amborella trichopoda AMTR_s00065p00092420 N 0.920
Eucgr.F00097 Eucalyptus grandis Eucgr.F00097 N 0.920
PK18842.1 Cannabis sativa PK18842.1 N 0.920
Gorai.009G277500 Gossypium raimondii Gorai.009G277500 N 0.880
OB03G39940 Oryza brachyantha OB03G39940 I 0.852
GRMZM2G067743 Zea mays GRMZM2G067743 I 0.850
Solyc10g083510.1 Solanum lycopersicum Solyc10g083510.1 N 0.840
PGSC0003DMG400028259 Solanum tuberosum PGSC0003DMG400028259 N 0.840
PGSC0003DMG400021403 Solanum tuberosum PGSC0003DMG400021403 N 0.840
Solyc02g092070.2 Solanum lycopersicum Solyc02g092070.2 N 0.840
Bo1g003460 Brassica oleracea Bo1g003460 N 0.800
VIT_08s0007g03760 Vitis vinifera VIT_08s0007g03760 N 0.800
28976.m000158 Ricinus communis 28976.m000158 N 0.800
gw1.246.118.1 Physcomitrella patens gw1.246.118.1 N 0.800
GLYMA10G07790 Glycine max GLYMA10G07790 N 0.800
gw1.344.18.1 Physcomitrella patens gw1.344.18.1 N 0.800
AtGRF7 Vitis vinifera VIT_16s0098g01080 N 0.760
mgf026507m Mimulus guttatus mgf026507m I 0.760
gene13517-v1.0-hybrid Fragaria vesca gene13517-v1.0-hybrid I 0.760
Gorai.004G204600 Gossypium raimondii Gorai.004G204600 I 0.760
Thhalv10020873m.g Eutrema salsugineum Thhalv10020873m.g I 0.760
Carubv10013860m.g Capsella rubella Carubv10013860m.g I 0.760
Cagra.0736s0034 Capsella grandiflora Cagra.0736s0034 I 0.760
mgf002023m Mimulus guttatus mgf002023m I 0.760
Aquca_013_00537 Aquilegia coerulea Aquca_013_00537 I 0.760
Bostr.28625s0309 Boechera stricta Bostr.28625s0309 I 0.760
Pm023072 Prunus mume Pm023072 I 0.760
Solyc08g005430.2 Solanum lycopersicum Solyc08g005430.2 I 0.760
Bra006956 Brassica rapa Bra006956 N 0.760
AtGRF5 Arabidopsis lyrata fgenesh2_kg.3__1504__AT3G13960.1 I 0.760
Bra019640 Brassica rapa Bra019640 N 0.760
MLOC_80060 Hordeum vulgare MLOC_80060 N 0.760
BRADI3G51685 Brachypodium distachyon BRADI3G51685 N 0.760
PGSC0003DMG400018491 Solanum tuberosum PGSC0003DMG400018491 I 0.760
PRUPE_ppa011917mg Prunus persica PRUPE_ppa011917mg I 0.760
GSMUA_Achr2G04650_001 Musa acuminata GSMUA_Achr2G04650_001 I 0.760
GSMUA_Achr10G06370_001 Musa acuminata GSMUA_Achr10G06370_001 I 0.760
GRF5 Arabidopsis thaliana AT3G13960 I 0.760
F775_32835 Aegilops tauschii F775_32835 N 0.720
GLYMA04G40880 Glycine max GLYMA04G40880 N 0.720
F775_13620 Aegilops tauschii F775_13620 I 0.720
orange1.1g010979m.g Citrus sinensis orange1.1g010979m.g N 0.720
BGIOSGA022506 Oryza indica BGIOSGA022506 I 0.720
LjSGA_066892.1 Lotus japonicus LjSGA_066892.1 N 0.720
SapurV1A.2815s0020 Salix purpurea SapurV1A.2815s0020 N 0.720
SapurV1A.0177s0310 Salix purpurea SapurV1A.0177s0310 I 0.720
Ciclev10019828m.g Citrus clementina Ciclev10019828m.g N 0.720
Bra019244 Brassica rapa Bra019244 N 0.720
BRADI1G12650 Brachypodium distachyon BRADI1G12650 N 0.720
GSMUA_Achr6G01270_001 Musa acuminata GSMUA_Achr6G01270_001 I 0.720
PGSC0003DMG400012233 Solanum tuberosum PGSC0003DMG400012233 N 0.720
GRF2 Oryza sativa OS06G0204800 I 0.720
ORUFI06G06870 Oryza rufipogon ORUFI06G06870 I 0.720
Traes_4AL_A8CBB811B Triticum aestivum Traes_4AL_A8CBB811B N 0.720
TRIUR3_34986 Triticum urartu TRIUR3_34986 N 0.720
Traes_4BS_AAE1439D4 Triticum aestivum Traes_4BS_AAE1439D4 N 0.720
TRIUR3_30418 Triticum urartu TRIUR3_30418 I 0.720
ORGLA06G0059900 Oryza glaberrima ORGLA06G0059900 I 0.720
OPUNC06G06310 Oryza punctata OPUNC06G06310 I 0.720
GSMUA_Achr8G30640_001 Musa acuminata GSMUA_Achr8G30640_001 I 0.720
Traes_4DS_261E93270 Triticum aestivum Traes_4DS_261E93270 N 0.720
LPERR06G06090 Leersia perrieri LPERR06G06090 I 0.720
MLOC_64055 Hordeum vulgare MLOC_64055 I 0.720
OMERI06G07610 Oryza meridionalis OMERI06G07610 I 0.720
OGLUM06G07010 Oryza glumaepatula OGLUM06G07010 I 0.720
GLYMA06G13960 Glycine max GLYMA06G13960 N 0.720