RRS1 (Arabidopsis lyrata)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Al_scaffold_0008_337 T351854_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY14
M00731_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Chang et al.(2013)
pTH7570
0.820 0.661
WRKY14
M07375_2.00
Arabidopsis thaliana
NAAAGTCAACGNN

NNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_col_a
0.820 0.661
WRKY14
M07376_2.00
Arabidopsis thaliana
NAAAGTCAACGNH

DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_colamp_a
0.820 0.661
WRKY27
M02566_2.00
Arabidopsis thaliana
NNGTCHDNN

NNHDGACNN
PBM
Weirauch et al.(2014)
pTH8188
0.817 0.610
WRKY27
M07430_2.00
Arabidopsis thaliana
MAAAGTCAACKNH

DNMGTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY27_col_a
0.817 0.610
WRKY27
M07431_2.00
Arabidopsis thaliana
HAAAGTCAACKNH

DNMGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY27_colamp_a
0.817 0.610
WRKY65
M07372_2.00
Arabidopsis thaliana
NWWAGTCAACG

CGTTGACTWWN
Dap-seq
OMalley et al.(2016)
WRKY65_col_a
0.812 0.627
WRKY65
M07373_2.00
Arabidopsis thaliana
NAAAGTCAACGN

NCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a
0.812 0.627
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0008_337 WRKY 1173 1233

Links

Other WRKY family TFs
Other Arabidopsis lyrata TFs

Invalid Input OrderBy

378 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action