WRKY62 (Arabidopsis thaliana)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 AT5G01900 T351947_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY62
M02561_2.00		 Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.850 0.678
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.848 0.678
For this family, TFs with SR scores > 0.808 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02561_2.00 WRKY 52 112

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G01900.1 WRKY 110 170

Links

Other WRKY family TFs
Other Arabidopsis thaliana TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.891
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.880
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.880
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.877
Bra028918 Brassica rapa Bra028918 I 0.877
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.876
Bra023211 Brassica rapa Bra023211 I 0.869
Bo5g068250 Brassica oleracea Bo5g068250 I 0.869
WRKY38 Arabidopsis thaliana AT5G22570 D 0.850
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.850
WRKY64 Arabidopsis thaliana AT1G66560 I 0.849
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.848
WRKY63 Arabidopsis thaliana AT1G66600 D 0.848
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.847
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.847
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.847
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.846
WRKY66 Arabidopsis thaliana AT1G80590 I 0.846
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.843
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.843
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.842
Bo01002s040 Brassica oleracea Bo01002s040 I 0.841
Bra002421 Brassica rapa Bra002421 I 0.841
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.840
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.840
WRKY67 Arabidopsis thaliana AT1G66550 I 0.838
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.838
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.837
Bo2g095820 Brassica oleracea Bo2g095820 I 0.837
Bra020196 Brassica rapa Bra020196 I 0.837
Bra008459 Brassica rapa Bra008459 I 0.837
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.836
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.835
Bra008454 Brassica rapa Bra008454 I 0.835
Bo2g024040 Brassica oleracea Bo2g024040 I 0.835
Bra020197 Brassica rapa Bra020197 I 0.835
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.833
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.833
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.832
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.827
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.826
OB05G27850 Oryza brachyantha OB05G27850 I 0.826
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.826
OPUNC05G18000 Oryza punctata OPUNC05G18000 I 0.826
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I 0.825
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.824
TCM_045555 Theobroma cacao TCM_045555 I 0.824
MDP0000828055 Malus domestica MDP0000828055 I 0.824
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.824
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I 0.823
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.823
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.823
Bo6g066790 Brassica oleracea Bo6g066790 I 0.823
OBART05G20330 Oryza barthii OBART05G20330 I 0.823
GLYMA04G40121 Glycine max GLYMA04G40121 I 0.823
OB01G44150 Oryza brachyantha OB01G44150 I 0.822
Pm019076 Prunus mume Pm019076 I 0.822
OPUNC05G18030 Oryza punctata OPUNC05G18030 I 0.821
Gorai.012G014000 Gossypium raimondii Gorai.012G014000 I 0.821
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.821
GLYMA06G14731 Glycine max GLYMA06G14731 I 0.821
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.821
Ca_21669 Cicer arietinum Ca_21669 I 0.820
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.820
MDP0000460139 Malus domestica MDP0000460139 I 0.820
OGLUM05G21440 Oryza glumaepatula OGLUM05G21440 I 0.819
Si028202m.g Setaria italica Si028202m.g I 0.819
PRUPE_ppa014826mg Prunus persica PRUPE_ppa014826mg I 0.818
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.818
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.818
29729.m002370 Ricinus communis 29729.m002370 I 0.818
MLOC_78461 Hordeum vulgare MLOC_78461 I 0.818
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.818
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.817
PGSC0003DMG400008776 Solanum tuberosum PGSC0003DMG400008776 I 0.817
OS05G0478800 Oryza sativa OS05G0478800 I 0.817
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.817
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.817
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I 0.817
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.817
mgf026576m Mimulus guttatus mgf026576m I 0.817
OB05G17240 Oryza brachyantha OB05G17240 I 0.817
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.817
LPERR01G30490 Leersia perrieri LPERR01G30490 I 0.817
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.817
29729.m002330 Ricinus communis 29729.m002330 I 0.816
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.816
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.816
POPTR_0013s09460 Populus trichocarpa POPTR_0013s09460 I 0.816
Si012735m.g Setaria italica Si012735m.g I 0.816
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.815
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.815
MTR_5g067680 Medicago truncatula MTR_5g067680 I 0.815
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.814
OS05G0478400 Oryza sativa OS05G0478400 I 0.814
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.814
cassava8741.m1 Manihot esculenta cassava8741.m1 I 0.814
Si036565m.g Setaria italica Si036565m.g I 0.814
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.814
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.814
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.814
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.814
Bra016975 Brassica rapa Bra016975 I 0.814
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.814
Bra008456 Brassica rapa Bra008456 I 0.814
OBART01G35350 Oryza barthii OBART01G35350 I 0.813
GRMZM2G158328 Zea mays GRMZM2G158328 I 0.813
ONIVA01G40370 Oryza nivara ONIVA01G40370 I 0.813
Pavir.J39511 Panicum virgatum Pavir.J39511 I 0.813
Traes_3DL_48F7A19D2 Triticum aestivum Traes_3DL_48F7A19D2 I 0.813
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.813
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I 0.813
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I 0.813
F775_23182 Aegilops tauschii F775_23182 I 0.813
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.813
OB01G44140 Oryza brachyantha OB01G44140 I 0.813
evm.TU.supercontig_19.45 Carica papaya evm.TU.supercontig_19.45 I 0.813
BGIOSGA004704 Oryza indica BGIOSGA004704 I 0.813
ORGLA01G0291900 Oryza glaberrima ORGLA01G0291900 I 0.813
OBART05G20340 Oryza barthii OBART05G20340 I 0.813
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.813
BRADI2G53495 Brachypodium distachyon BRADI2G53495 I 0.813
ORUFI01G38670 Oryza rufipogon ORUFI01G38670 I 0.813
Traes_3AL_2297D6E18 Triticum aestivum Traes_3AL_2297D6E18 I 0.812
OBART11G01110 Oryza barthii OBART11G01110 I 0.812
GSMUA_Achr5G08580_001 Musa acuminata GSMUA_Achr5G08580_001 I 0.812
BGIOSGA034612 Oryza indica BGIOSGA034612 I 0.812
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.812
LPERR05G06630 Leersia perrieri LPERR05G06630 I 0.812
Lus10029022.g Linum usitatissimum Lus10029022.g I 0.812
ORUFI01G38660 Oryza rufipogon ORUFI01G38660 I 0.812
OS01G0820700 Oryza sativa OS01G0820700 I 0.812
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.812
ONIVA01G40340 Oryza nivara ONIVA01G40340 I 0.812
ORGLA11G0202000 Oryza glaberrima ORGLA11G0202000 I 0.812
BGIOSGA004703 Oryza indica BGIOSGA004703 I 0.812
ORGLA01G0291800 Oryza glaberrima ORGLA01G0291800 I 0.812
ONIVA11G01240 Oryza nivara ONIVA11G01240 I 0.812
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.812
OGLUM11G00870 Oryza glumaepatula OGLUM11G00870 I 0.812
Bra000202 Brassica rapa Bra000202 I 0.811
Cagra.0925s0055 Capsella grandiflora Cagra.0925s0055 I 0.811
OBART01G35310 Oryza barthii OBART01G35310 I 0.811
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I 0.811
Al_scaffold_0005_2548 Arabidopsis lyrata Al_scaffold_0005_2548 I 0.811
Cucsa.143840 Cucumis sativus Cucsa.143840 I 0.811
OB05G27830 Oryza brachyantha OB05G27830 I 0.811
Bo3g035130 Brassica oleracea Bo3g035130 I 0.811
OPUNC01G34280 Oryza punctata OPUNC01G34280 I 0.811
Eucgr.G03144 Eucalyptus grandis Eucgr.G03144 I 0.811
GRMZM2G005207 Zea mays GRMZM2G005207 I 0.811
Carubv10017859m.g Capsella rubella Carubv10017859m.g I 0.811
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.811
Sb01g036180 Sorghum bicolor Sb01g036180 I 0.811
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.810
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.810
Ca_18932 Cicer arietinum Ca_18932 I 0.810
Si002121m.g Setaria italica Si002121m.g I 0.810
Lus10014177.g Linum usitatissimum Lus10014177.g I 0.810
LPERR10G04210 Leersia perrieri LPERR10G04210 I 0.810
cassava26362.m1 Manihot esculenta cassava26362.m1 I 0.810
GRMZM2G065290 Zea mays GRMZM2G065290 I 0.810
Eucgr.J00107 Eucalyptus grandis Eucgr.J00107 I 0.810
LPERR11G00960 Leersia perrieri LPERR11G00960 I 0.809
Carubv10023773m.g Capsella rubella Carubv10023773m.g I 0.809
gene21364-v1.0-hybrid Fragaria vesca gene21364-v1.0-hybrid I 0.809
Cla007423 Citrullus lanatus Cla007423 I 0.809
OMERI11G01540 Oryza meridionalis OMERI11G01540 I 0.809
Sb03g038180 Sorghum bicolor Sb03g038180 I 0.809
OMERI11G01580 Oryza meridionalis OMERI11G01580 I 0.809
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.809
Thhalv10017926m.g Eutrema salsugineum Thhalv10017926m.g I 0.809
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.809
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I 0.809
Cagra.1642s0038 Capsella grandiflora Cagra.1642s0038 I 0.809
Bo4g190380 Brassica oleracea Bo4g190380 I 0.809
Bostr.9345s0061 Boechera stricta Bostr.9345s0061 I 0.809
Pavir.J12092 Panicum virgatum Pavir.J12092 I 0.809
WRKY55 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001817 I 0.809
Pavir.Eb03562 Panicum virgatum Pavir.Eb03562 I 0.808
SapurV1A.2126s0010 Salix purpurea SapurV1A.2126s0010 I 0.808
TRIUR3_06813 Triticum urartu TRIUR3_06813 I 0.808
ONIVA05G08650 Oryza nivara ONIVA05G08650 I 0.808
OPUNC05G07410 Oryza punctata OPUNC05G07410 I 0.808
OMERI01G32490 Oryza meridionalis OMERI01G32490 I 0.808
OLONG_019907 Oryza longistaminata OLONG_019907 I 0.808
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I 0.808
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I 0.808
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I 0.808
F775_02122 Aegilops tauschii F775_02122 I 0.808
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.808
F775_15928 Aegilops tauschii F775_15928 I 0.808
Ca_12915 Cicer arietinum Ca_12915 I 0.808
OBART05G08130 Oryza barthii OBART05G08130 I 0.808
BGIOSGA017556 Oryza indica BGIOSGA017556 I 0.808