Bo7g110920 (Brassica oleracea)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Bo7g110920 T352192_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY2
M02567_2.00
Arabidopsis thaliana
BRGTCAAM

KTTGACYV
PBM
Weirauch et al.(2014)
pTH8832
0.868 0.861
WRKY20
M07414_2.00
Arabidopsis thaliana
HHHRGTCAAMGNH

DNCKTTGACYDDD
Dap-seq
OMalley et al.(2016)
WRKY20_col_a
0.852 0.774
Q40090_IPOBA
M11466_2.00
Ipomoea batatas Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPF1_Q2
0.847 0.800
WRKY33
M02554_2.00
Arabidopsis thaliana
NNRGTCHDNN

NNHDGACYNN
PBM
Weirauch et al.(2014)
pTH8183
0.843 0.774
WRKY33
M07391_2.00
Arabidopsis thaliana
HWWAGTCAAMD

HKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY33_col_a
0.843 0.774
WRKY3
M07381_2.00
Arabidopsis thaliana
MAWAGTCAAMR

YKTTGACTWTK
Dap-seq
OMalley et al.(2016)
WRKY3_col_a
0.843 0.748
WRKY26
M07418_2.00
Arabidopsis thaliana
MWAAGTCAACGNH

DNCGTTGACTWWK
Dap-seq
OMalley et al.(2016)
WRKY26_col_a
0.842 0.748
WRKY26
M07419_2.00
Arabidopsis thaliana
HMWAGTCAAMR

YKTTGACTWKD
Dap-seq
OMalley et al.(2016)
WRKY26_colamp_a
0.842 0.748
PK05432.1
M01324_2.00
Cannabis sativa
NNRGTCARH

DYTGACYNN
PBM
Lambert et al.(2019)
pTH11342
0.838 0.765
ZAP1
M02726_2.00
Arabidopsis thaliana
DRCKCGGTCAA

TTGACCGMGYH
SELEX
Mathelier et al.(2014)
MA0589.1
0.832 0.635
ZAP1
M11463_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_01
0.832 0.635
WRKY25
M02552_2.00
Arabidopsis thaliana
YRGTCAAM

KTTGACYR
PBM
Weirauch et al.(2014)
pTH8810
0.826 0.670
WRKY25
M07387_2.00
Arabidopsis thaliana
HWWRGTCAAMR

YKTTGACYWWD
Dap-seq
OMalley et al.(2016)
WRKY25_col_a
0.826 0.670
WRKY25
M07388_2.00
Arabidopsis thaliana
NNNHWRGTCAACRNH

DNYGTTGACYWDNNN
Dap-seq
OMalley et al.(2016)
WRKY25_colamp_a
0.826 0.670
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g110920.1 WRKY 173 229
Bo7g110920.1 WRKY 353 410

Links

Other WRKY family TFs
Other Brassica oleracea TFs

770 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA003668 Oryza indica BGIOSGA003668 N 0.000
Traes_4AL_98EA87DFA1 Triticum aestivum Traes_4AL_98EA87DFA1 N 0.000
Si002433m.g Setaria italica Si002433m.g N 0.000
Sb03g011280 Sorghum bicolor Sb03g011280 N 0.000
OPUNC01G18590 Oryza punctata OPUNC01G18590 N 0.000
ONIVA01G20310 Oryza nivara ONIVA01G20310 N 0.000
OMERI02G28370 Oryza meridionalis OMERI02G28370 N 0.000
LPERR01G15780 Leersia perrieri LPERR01G15780 N 0.000
GSMUA_Achr9G21870_001 Musa acuminata GSMUA_Achr9G21870_001 N 0.000
GRMZM2G456960 Zea mays GRMZM2G456960 N 0.000
GRMZM2G301642 Zea mays GRMZM2G301642 N 0.000
BRADI5G26110 Brachypodium distachyon BRADI5G26110 N 0.000
BRADI2G13860 Brachypodium distachyon BRADI2G13860 N 0.000
MYBS1 Oryza indica BGIOSGA003670 N 0.000
Pavir.Ea01767 Panicum virgatum Pavir.Ea01767 N 0.000