Bo8g049940 (Brassica oleracea)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Bo8g049940 T352198_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY28
M07406_2.00
Arabidopsis thaliana
HAAAGTCAAMNNH

DNNKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY28_col_a
0.878 0.966
WRKY28
M07407_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a
0.878 0.966
WRKY8
M02564_2.00
Arabidopsis thaliana
NRGTCAAHN

NDTTGACYN
PBM
Weirauch et al.(2014)
pTH7554
0.878 0.948
WRKY8
M07428_2.00
Arabidopsis thaliana
NAAAAGTCAACRNHW

WDNYGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a
0.878 0.948
WRKY8
M07429_2.00
Arabidopsis thaliana
NNVAAAGTCAACRNH

DNYGTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY8_col
0.878 0.948
WRKY48
M02565_2.00
Arabidopsis thaliana
NNVGTCADNN

NNHTGACBNN
PBM
Weirauch et al.(2014)
pTH7552
0.872 0.810
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN

NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.871 0.914
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG

CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.859 0.810
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM

KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.859 0.810
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN

NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.856 0.793
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN

NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.844 0.690
WRKY65
M07372_2.00
Arabidopsis thaliana
NWWAGTCAACG

CGTTGACTWWN
Dap-seq
OMalley et al.(2016)
WRKY65_col_a
0.837 0.569
WRKY65
M07373_2.00
Arabidopsis thaliana
NAAAGTCAACGN

NCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a
0.837 0.569
WRKY27
M02566_2.00
Arabidopsis thaliana
NNGTCHDNN

NNHDGACNN
PBM
Weirauch et al.(2014)
pTH8188
0.836 0.569
WRKY27
M07430_2.00
Arabidopsis thaliana
MAAAGTCAACKNH

DNMGTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY27_col_a
0.836 0.569
WRKY27
M07431_2.00
Arabidopsis thaliana
HAAAGTCAACKNH

DNMGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY27_colamp_a
0.836 0.569
WRKY21
M02553_2.00
Arabidopsis thaliana
NNRGTCAAMN

NKTTGACYNN
PBM
Weirauch et al.(2014)
pTH7422
0.834 0.586
WRKY21
M07389_2.00
Arabidopsis thaliana
HAAAGTCAACNNH

DNNGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a
0.834 0.586
WRKY21
M07390_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_col
0.834 0.586
WRKY22
M02557_2.00
Arabidopsis thaliana
NNNKTMHDNN

NNHDKAMNNN
PBM
Weirauch et al.(2014)
pTH7320
0.833 0.569
WRKY22
M07400_2.00
Arabidopsis thaliana
AAAAGTCAACKNH

DNMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a
0.833 0.569
WRKY22
M07401_2.00
Arabidopsis thaliana
NAAAGTCAACKNH

DNMGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY22_col
0.833 0.569
WRKY14
M00731_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Chang et al.(2013)
pTH7570
0.829 0.534
WRKY14
M07375_2.00
Arabidopsis thaliana
NAAAGTCAACGNN

NNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_col_a
0.829 0.534
WRKY14
M07376_2.00
Arabidopsis thaliana
NAAAGTCAACGNH

DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_colamp_a
0.829 0.534
WRKY11
M02559_2.00
Arabidopsis thaliana
NDGTCAAHNN

NNDTTGACHN
PBM
Weirauch et al.(2014)
pTH8091
0.827 0.569
WRKY11
M07415_2.00
Arabidopsis thaliana
NHAAAGTCAACBNH

DNVGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY11_col_a
0.827 0.569
WRKY11
M11464_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY11_Q2
0.827 0.569
WRKY17
M02550_2.00
Arabidopsis thaliana
NNDGTCAAHN

NDTTGACHNN
PBM
Weirauch et al.(2014)
pTH8088
0.826 0.569
WRKY17
M07385_2.00
Arabidopsis thaliana
NHAAAGTCAACRNN

NNYGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY17_col_a
0.826 0.569
WRKY17
M07386_2.00
Arabidopsis thaliana
NMAAAGTCAACGN

NCGTTGACTTTKN
Dap-seq
OMalley et al.(2016)
WRKY17_colamp_a
0.826 0.569
WRKY75
M02562_2.00
Arabidopsis thaliana
NRGTCAAM

KTTGACYN
PBM
Weirauch et al.(2014)
pTH8821
0.826 0.690
WRKY75
M07420_2.00
Arabidopsis thaliana
NAAAGTCAACGNH

DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY75_col_a
0.826 0.690
WRKY75
M07421_2.00
Arabidopsis thaliana
VAAAGTCAACRNH

DNYGTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY75_colamp_a
0.826 0.690
Q40828_PETCR
M11467_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY_Q2
0.824 0.552
WRKY43
M02555_2.00
Arabidopsis thaliana
NRGTCAAHNN

NNDTTGACYN
PBM
Weirauch et al.(2014)
pTH7373
0.823 0.690
WRKY43
M07393_2.00
Arabidopsis thaliana
NNAAAGTCAACGNN

NNCGTTGACTTTNN
Dap-seq
OMalley et al.(2016)
WRKY43_col_a
0.823 0.690
WRKY43
M07394_2.00
Arabidopsis thaliana
NNNNAAAGTCAACGN

NCGTTGACTTTNNNN
Dap-seq
OMalley et al.(2016)
WRKY43_colamp_a
0.823 0.690
WRKY45
M00899_2.00
Arabidopsis thaliana
NNRGTCAAMGN

NCKTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY45
0.822 0.638
WRKY45
M07397_2.00
Arabidopsis thaliana
NAAAAGTCAAMD

HKTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY45_col_a
0.822 0.638
WRKY45
M07398_2.00
Arabidopsis thaliana
MAAAGTCAAMV

BKTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY45_colamp_a
0.822 0.638
WRKY24
M07426_2.00
Arabidopsis thaliana
NNNAWAGTCAACGN

NCGTTGACTWTNNN
Dap-seq
OMalley et al.(2016)
WRKY24_col_a
0.821 0.707
WRKY24
M07427_2.00
Arabidopsis thaliana
NAWAGTCAACGNH

DNCGTTGACTWTN
Dap-seq
OMalley et al.(2016)
WRKY24_colamp_a
0.821 0.707
WRKY29
M02558_2.00
Arabidopsis thaliana
NNNGTCHDNN

NNHDGACNNN
PBM
Weirauch et al.(2014)
pTH9604
0.818 0.534
WRKY29
M07410_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY29_col_a
0.818 0.534
WRKY29
M07411_2.00
Arabidopsis thaliana
HWWAGTCAAMDNN

NNHKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a
0.818 0.534
WRKY15
M02549_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Weirauch et al.(2014)
pTH7602
0.818 0.534
WRKY15
M07383_2.00
Arabidopsis thaliana
AAAAGTCAACKN

NMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY15_colamp_a
0.818 0.534
WRKY15
M07384_2.00
Arabidopsis thaliana
NWAAGTCAACB

VGTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY15_col_b
0.818 0.534
WRKY12
M00898_2.00
Arabidopsis thaliana
NHGGTCAACNN

NNGTTGACCDN
PBM
Franco-Zorrilla et al.(2014)
WRKY12
0.817 0.690
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN

NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.816 0.638
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN

NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.816 0.638
WRKY7
M07412_2.00
Arabidopsis thaliana
NNDDDNNNNMAAAGTCAACGV

BCGTTGACTTTKNNNNHHHNN
Dap-seq
OMalley et al.(2016)
WRKY7_colamp_a
0.813 0.534
WRKY7
M07413_2.00
Arabidopsis thaliana
NAAAAGTCAACKNN

NNMGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY7_col
0.813 0.534
fgenesh1_pg.C_Chr_11.0001000193
M02570_2.00
Ostreococcus tauri
NRGTCARNN

NNYTGACYN
PBM
Weirauch et al.(2014)
pTH9432
0.810 0.552
PK25870.1
M01325_2.00
Cannabis sativa
NRGTCAAM

KTTGACYN
PBM
Lambert et al.(2019)
pTH10156
0.808 0.621
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g049940.1 WRKY 158 215

Links

Other WRKY family TFs
Other Brassica oleracea TFs

2148 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AALB004916 Anopheles albimanus AALB004916 I 0.000
AALB007707 Anopheles albimanus AALB007707 I 0.000
Aan_R000006 Calypte anna Aan_R000006 I 0.000
AATE014392 Anopheles atroparvus AATE014392 I 0.000
ACEP22182 Atta cephalotes ACEP22182 I 0.000
ADIR001763 Anopheles dirus ADIR001763 I 0.000
ADIR008635 Anopheles dirus ADIR008635 I 0.000
AEPI004981 Anopheles epiroticus AEPI004981 I 0.000
Afo_R008451 Aptenodytes forsteri Afo_R008451 I 0.000
AMEC018259 Anopheles melas AMEC018259 I 0.000
AMEM013417 Anopheles merus AMEM013417 I 0.000
ASIS013253 Anopheles sinensis ASIS013253 I 0.000
BGLB001559 Biomphalaria glabrata BGLB001559 N 0.000
CapteG41929 Capitella teleta CapteG41929 I 0.000
CLEC013753 Cimex lectularius CLEC013753 I 0.000
Cmyd_10004252 Chelonia mydas Cmyd_10004252 I 0.000
D918_03762 Trichuris suis D918_03762 N 0.000
DILT_0000834901 Diphyllobothrium latum DILT_0000834901 I 0.000
EFV59137 Trichinella spiralis EFV59137 N 0.000
ENSACAG00000012070 Anolis carolinensis ENSACAG00000012070 I 0.000
ENSAMEG00000004941 Ailuropoda melanoleuca ENSAMEG00000004941 I 0.000
Hmbox1 Dipodomys ordii ENSDORG00000015971 N 0.000
PITX1 Homo sapiens ENSG00000069011 D 0.000
HNF1A Homo sapiens ENSG00000135100 D 0.000
HMBOX1 Homo sapiens ENSG00000147421 D 0.000
ENSLACG00000003225 Latimeria chalumnae ENSLACG00000003225 N 0.000
ENSMICG00000004221 Microcebus murinus ENSMICG00000004221 I 0.000
HMBOX1 Microcebus murinus ENSMICG00000010422 N 0.000
Hmbox1 Mus musculus ENSMUSG00000021972 D 0.000
Hnf1a Mus musculus ENSMUSG00000029556 D 0.000
ENSOANG00000030226 Ornithorhynchus anatinus ENSOANG00000030226 I 0.000
HMBOX1 Ochotona princeps ENSOPRG00000013613 N 0.000
MNX1 Pteropus vampyrus ENSPVAG00000006643 I 0.000
HMBOX1 Sorex araneus ENSSARG00000009365 N 0.000
ENSTBEG00000005238 Tupaia belangeri ENSTBEG00000005238 I 0.000
ENSTGUG00000016719 Taeniopygia guttata ENSTGUG00000016719 I 0.000
ENSXMAG00000020166 Xiphophorus maculatus ENSXMAG00000020166 I 0.000
HDID_0000783701 Hymenolepis diminuta HDID_0000783701 I 0.000
maker-nMf.1.1.scaf06360-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf06360-augustus-gene-0.6 I 0.000
maker-nMf.1.1.scaf10679-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf10679-snap-gene-0.4 I 0.000
MESCA002805 Megaselia scalaris MESCA002805 I 0.000
MESCA003774 Megaselia scalaris MESCA003774 I 0.000
MhA1_Contig878.frz3.gene2 Meloidogyne hapla MhA1_Contig878.frz3.gene2 I 0.000
Minc06164 Meloidogyne incognita Minc06164 I 0.000
Ocbimv22024516m.g Octopus bimaculoides Ocbimv22024516m.g I 0.000
SBAD_0000184901 Soboliphyme baturini SBAD_0000184901 I 0.000
SINV18775 Solenopsis invicta SINV18775 I 0.000
SINV25862 Solenopsis invicta SINV25862 I 0.000
Sjc_0117080 Schistosoma japonicum Sjc_0117080 N 0.000
SPU_008196 Strongylocentrotus purpuratus SPU_008196 N 0.000
TTRE_0000607501 Trichuris trichiura TTRE_0000607501 N 0.000