Bra020196 (Brassica rapa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Bra020196 T352298_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN

NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.862 0.847
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM

KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.837 0.661
WRKY63
M02546_2.00
Arabidopsis thaliana
NGGTCAAN

NTTGACCN
PBM
Weirauch et al.(2014)
pTH8182
0.834 0.661
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra020196.1-P WRKY 109 169

Links

Other WRKY family TFs
Other Brassica rapa TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra020197 Brassica rapa Bra020197 I 0.889
Bo2g024040 Brassica oleracea Bo2g024040 I 0.889
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.869
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.869
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.869
Bra002421 Brassica rapa Bra002421 I 0.866
Bo01002s040 Brassica oleracea Bo01002s040 I 0.866
WRKY38 Arabidopsis thaliana AT5G22570 D 0.862
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.862
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.858
Bra028918 Brassica rapa Bra028918 I 0.854
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.853
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.845
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.845
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.845
Bra023211 Brassica rapa Bra023211 I 0.844
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.844
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.844
Bo5g068250 Brassica oleracea Bo5g068250 I 0.844
WRKY66 Arabidopsis thaliana AT1G80590 I 0.841
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.841
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.840
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.840
WRKY67 Arabidopsis thaliana AT1G66550 I 0.840
WRKY64 Arabidopsis thaliana AT1G66560 I 0.838
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.837
WRKY62 Arabidopsis thaliana AT5G01900 D 0.837
WRKY63 Arabidopsis thaliana AT1G66600 D 0.834
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.833
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.832
Ca_18932 Cicer arietinum Ca_18932 I 0.831
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.828
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.826
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.825
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.825
Bra008454 Brassica rapa Bra008454 I 0.824
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.822
Cla018337 Citrullus lanatus Cla018337 I 0.822
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.820
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.820
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.820
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.819
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.819
Bra008459 Brassica rapa Bra008459 I 0.819
Bo2g095820 Brassica oleracea Bo2g095820 I 0.819
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.819
Pm003014 Prunus mume Pm003014 I 0.818
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.818
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.818
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.817
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.816
TCM_019689 Theobroma cacao TCM_019689 I 0.816
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.816
Pm003013 Prunus mume Pm003013 I 0.815
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.815
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.814
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.814
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.814
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.814
OS05G0478800 Oryza sativa OS05G0478800 I 0.814
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.814
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.813
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.813
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.812
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.812
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.812
mgf002542m Mimulus guttatus mgf002542m I 0.812
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.811
Si025181m.g Setaria italica Si025181m.g I 0.811
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.811
Pm003015 Prunus mume Pm003015 I 0.811
OB05G17240 Oryza brachyantha OB05G17240 I 0.810
OB03G26140 Oryza brachyantha OB03G26140 I 0.810
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.810
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.810
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.809
Bra008456 Brassica rapa Bra008456 I 0.809
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.809
Ca_12915 Cicer arietinum Ca_12915 I 0.809
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.809
OPUNC05G18000 Oryza punctata OPUNC05G18000 I 0.809
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.809
OB05G27850 Oryza brachyantha OB05G27850 I 0.809
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.808
F775_24185 Aegilops tauschii F775_24185 I 0.808
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.808