Bra031221 (Brassica rapa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Bra031221 T352343_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY59
M07382_2.00
Arabidopsis thaliana
NDWWAGTCAAMN

NKTTGACTWWHN
Dap-seq
OMalley et al.(2016)
WRKY59_col_a
0.887 0.862
WRKY14
M00731_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Chang et al.(2013)
pTH7570
0.818 0.483
WRKY14
M07375_2.00
Arabidopsis thaliana
NAAAGTCAACGNN

NNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_col_a
0.818 0.483
WRKY14
M07376_2.00
Arabidopsis thaliana
NAAAGTCAACGNH

DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_colamp_a
0.818 0.483
WRKY27
M02566_2.00
Arabidopsis thaliana
NNGTCHDNN

NNHDGACNN
PBM
Weirauch et al.(2014)
pTH8188
0.818 0.466
WRKY27
M07430_2.00
Arabidopsis thaliana
MAAAGTCAACKNH

DNMGTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY27_col_a
0.818 0.466
WRKY27
M07431_2.00
Arabidopsis thaliana
HAAAGTCAACKNH

DNMGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY27_colamp_a
0.818 0.466
WRKY22
M02557_2.00
Arabidopsis thaliana
NNNKTMHDNN

NNHDKAMNNN
PBM
Weirauch et al.(2014)
pTH7320
0.817 0.483
WRKY22
M07400_2.00
Arabidopsis thaliana
AAAAGTCAACKNH

DNMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a
0.817 0.483
WRKY22
M07401_2.00
Arabidopsis thaliana
NAAAGTCAACKNH

DNMGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY22_col
0.817 0.483
WRKY21
M02553_2.00
Arabidopsis thaliana
NNRGTCAAMN

NKTTGACYNN
PBM
Weirauch et al.(2014)
pTH7422
0.816 0.517
WRKY21
M07389_2.00
Arabidopsis thaliana
HAAAGTCAACNNH

DNNGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a
0.816 0.517
WRKY21
M07390_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_col
0.816 0.517
WRKY29
M02558_2.00
Arabidopsis thaliana
NNNGTCHDNN

NNHDGACNNN
PBM
Weirauch et al.(2014)
pTH9604
0.816 0.483
WRKY29
M07410_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY29_col_a
0.816 0.483
WRKY29
M07411_2.00
Arabidopsis thaliana
HWWAGTCAAMDNN

NNHKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a
0.816 0.483
WRKY65
M07372_2.00
Arabidopsis thaliana
NWWAGTCAACG

CGTTGACTWWN
Dap-seq
OMalley et al.(2016)
WRKY65_col_a
0.815 0.483
WRKY65
M07373_2.00
Arabidopsis thaliana
NAAAGTCAACGN

NCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a
0.815 0.483
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN

NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.811 0.517
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra031221.1-P WRKY 106 163

Links

Other WRKY family TFs
Other Brassica rapa TFs

680 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Afo_R005725 Aptenodytes forsteri Afo_R005725 N 0.000
Brh_R013360 Buceros rhinoceros Brh_R013360 N 0.000
Cmyd_10003651 Chelonia mydas Cmyd_10003651 N 0.000
KCMF1 Anolis carolinensis ENSACAG00000005906 N 0.000
ENSAMEG00000002032 Ailuropoda melanoleuca ENSAMEG00000002032 N 0.000
ENSAMXG00000006684 Astyanax mexicanus ENSAMXG00000006684 N 0.000
ENSAPLG00000013426 Anas platyrhynchos ENSAPLG00000013426 N 0.000
KCMF1 Bos taurus ENSBTAG00000020630 N 0.000
ENSBTAP00000052676-D1 Bos grunniens ENSBTAP00000052676-D1 N 0.000
KCMF1 Canis familiaris ENSCAFG00000007871 N 0.000
KCMF1 Choloepus hoffmanni ENSCHOG00000005786 N 0.000
ENSCJAG00000019735 Callithrix jacchus ENSCJAG00000019735 N 0.000
kcmf1 Danio rerio ENSDARG00000067656 N 0.000
KCMF1 Dasypus novemcinctus ENSDNOG00000047192 N 0.000
ENSDORG00000002248 Dipodomys ordii ENSDORG00000002248 N 0.000
KCMF1 Equus caballus ENSECAG00000024834 N 0.000
ENSETEG00000001809 Echinops telfairi ENSETEG00000001809 N 0.000
ENSFALG00000005137 Ficedula albicollis ENSFALG00000005137 N 0.000
KCMF1 Felis catus ENSFCAG00000026410 N 0.000
KCMF1 Homo sapiens ENSG00000176407 N 0.000
kcmf1 Gasterosteus aculeatus ENSGACG00000016222 N 0.000
ENSGALG00000014441 Gallus gallus ENSGALG00000014441 N 0.000
KCMF1 Gorilla gorilla ENSGGOG00000009501 N 0.000
ENSGMOG00000014478 Gadus morhua ENSGMOG00000014478 N 0.000
KCMF1 Loxodonta africana ENSLAFG00000018643 N 0.000
ENSLOCG00000011313 Lepisosteus oculatus ENSLOCG00000011313 N 0.000
ENSMEUG00000003898 Macropus eugenii ENSMEUG00000003898 N 0.000
KCMF1 Microcebus murinus ENSMICG00000016473 N 0.000
KCMF1 Myotis lucifugus ENSMLUG00000000979 N 0.000
KCMF1 Macaca mulatta ENSMMUG00000001414 N 0.000
KCMF1 Monodelphis domestica ENSMODG00000015567 N 0.000
ENSMPUG00000008632 Mustela putorius furo ENSMPUG00000008632 N 0.000
Kcmf1 Mus musculus ENSMUSG00000055239 N 0.000
ENSNLEG00000001418 Nomascus leucogenys ENSNLEG00000001418 N 0.000
KCMF1 Ornithorhynchus anatinus ENSOANG00000007129 N 0.000
ENSOARG00000020445 Ovis aries ENSOARG00000020445 N 0.000
KCMF1 Oryctolagus cuniculus ENSOCUG00000002533 N 0.000
KCMF1 Otolemur garnettii ENSOGAG00000034863 N 0.000
KCMF1 Ochotona princeps ENSOPRG00000009018 N 0.000
ENSPANG00000007610 Papio anubis ENSPANG00000007610 N 0.000
KCMF1 Procavia capensis ENSPCAG00000008538 N 0.000
ENSPPYG00000012235 Pongo abelii ENSPPYG00000012235 N 0.000
ENSPSIG00000012230 Pelodiscus sinensis ENSPSIG00000012230 N 0.000
KCMF1 Pan troglodytes ENSPTRG00000012127 N 0.000
KCMF1 Pteropus vampyrus ENSPVAG00000009122 N 0.000
Kcmf1 Rattus norvegicus ENSRNOG00000015097 N 0.000
ENSSHAG00000009198 Sarcophilus harrisii ENSSHAG00000009198 N 0.000
KCMF1 Sus scrofa ENSSSCG00000008242 N 0.000
ENSSTOG00000021528 Ictidomys tridecemlineatus ENSSTOG00000021528 N 0.000
KCMF1 Tupaia belangeri ENSTBEG00000016438 N 0.000
KCMF1 Taeniopygia guttata ENSTGUG00000000265 N 0.000
ENSTSYG00000009776 Tarsius syrichta ENSTSYG00000009776 N 0.000
KCMF1 Tursiops truncatus ENSTTRG00000001934 N 0.000
Gfo_R004112 Geospiza fortis Gfo_R004112 N 0.000
Gfo_R013520 Geospiza fortis Gfo_R013520 N 0.000
Pvit_16118 Pogona vitticeps Pvit_16118 N 0.000
Tal_R012527 Tyto alba Tal_R012527 N 0.000
kcmf1 Xenopus tropicalis XB-GENE-1021676 N 0.000
kcmf1.L Xenopus laevis XB-GENE-1021681 N 0.000