CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G22230
(
Brachypodium distachyon
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
BRADI2G22230
T352400_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.808
0.500
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G22230.1
WRKY
138
199
NDGFHWRKYGEKKILNAAFPRLYYRCGYSDEHKCPAKKYVQQQDNGDPPLFMVTLINDHTCD
Links
Other
WRKY
family TFs
Other
Brachypodium distachyon
TFs
214 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_1DL_DFE1721E0
Triticum aestivum
Traes_1DL_DFE1721E0
N
0.888
TRIUR3_22129
Triticum urartu
TRIUR3_22129
N
0.888
Traes_1AL_309623B48
Triticum aestivum
Traes_1AL_309623B48
N
0.888
Traes_1BL_46340D685
Triticum aestivum
Traes_1BL_46340D685
N
0.888
F775_02926
Aegilops tauschii
F775_02926
N
0.888
MLOC_11088
Hordeum vulgare
MLOC_11088
N
0.885
Traes_1AL_B24F28600
Triticum aestivum
Traes_1AL_B24F28600
I
0.882
Traes_1BL_B4AFDB663
Triticum aestivum
Traes_1BL_B4AFDB663
I
0.882
TRIUR3_34396
Triticum urartu
TRIUR3_34396
I
0.882
F775_31341
Aegilops tauschii
F775_31341
I
0.880
MLOC_57051
Hordeum vulgare
MLOC_57051
I
0.877
Pavir.J16737
Panicum virgatum
Pavir.J16737
N
0.867
OGLUM05G21430
Oryza glumaepatula
OGLUM05G21430
N
0.864
Sb09g023500
Sorghum bicolor
Sb09g023500
N
0.860
F775_03972
Aegilops tauschii
F775_03972
N
0.859
Si022933m.g
Setaria italica
Si022933m.g
N
0.859
GRMZM2G034421
Zea mays
GRMZM2G034421
N
0.857
ORGLA05G0177300
Oryza glaberrima
ORGLA05G0177300
N
0.856
OBART05G20320
Oryza barthii
OBART05G20320
N
0.856
LPERR05G16160
Leersia perrieri
LPERR05G16160
N
0.855
ONIVA05G21450
Oryza nivara
ONIVA05G21450
N
0.852
LPERR10G04210
Leersia perrieri
LPERR10G04210
I
0.850
OPUNC10G05310
Oryza punctata
OPUNC10G05310
N
0.849
OMERI10G04260
Oryza meridionalis
OMERI10G04260
N
0.849
OBART10G05920
Oryza barthii
OBART10G05920
N
0.849
ORGLA10G0049300
Oryza glaberrima
ORGLA10G0049300
N
0.849
OLONG_022888
Oryza longistaminata
OLONG_022888
N
0.848
OMERI05G18240
Oryza meridionalis
OMERI05G18240
N
0.845
OS05G0478700
Oryza sativa
OS05G0478700
N
0.845
BGIOSGA017861
Oryza indica
BGIOSGA017861
N
0.845
ORUFI05G21590
Oryza rufipogon
ORUFI05G21590
N
0.845
GRMZM2G030272
Zea mays
GRMZM2G030272
N
0.845
OLONG_007113
Oryza longistaminata
OLONG_007113
N
0.845
OPUNC05G17990
Oryza punctata
OPUNC05G17990
N
0.844
OB05G27840
Oryza brachyantha
OB05G27840
N
0.843
Traes_4DL_3140A8240
Triticum aestivum
Traes_4DL_3140A8240
N
0.840
BRADI1G63910
Brachypodium distachyon
BRADI1G63910
N
0.840
TRIUR3_06231
Triticum urartu
TRIUR3_06231
N
0.840
Sb01g036870
Sorghum bicolor
Sb01g036870
N
0.840
Si039519m.g
Setaria italica
Si039519m.g
N
0.840
F775_31089
Aegilops tauschii
F775_31089
N
0.840
Traes_4BL_A8C6FBEB6
Triticum aestivum
Traes_4BL_A8C6FBEB6
N
0.840
Traes_4AS_70DF607CC
Triticum aestivum
Traes_4AS_70DF607CC
N
0.840
Pavir.Ib01500
Panicum virgatum
Pavir.Ib01500
N
0.840
MLOC_57764
Hordeum vulgare
MLOC_57764
N
0.840
ONIVA03G16490
Oryza nivara
ONIVA03G16490
N
0.839
OS03G0321700
Oryza sativa
OS03G0321700
N
0.839
OGLUM03G15660
Oryza glumaepatula
OGLUM03G15660
N
0.839
OBART03G15470
Oryza barthii
OBART03G15470
N
0.839
OB03G25300
Oryza brachyantha
OB03G25300
N
0.839
OLONG_001744
Oryza longistaminata
OLONG_001744
N
0.839
ORUFI03G16080
Oryza rufipogon
ORUFI03G16080
N
0.839
OPUNC03G15030
Oryza punctata
OPUNC03G15030
N
0.839
LPERR03G13630
Leersia perrieri
LPERR03G13630
N
0.839
ORGLA03G0148400
Oryza glaberrima
ORGLA03G0148400
N
0.839
BGIOSGA012525
Oryza indica
BGIOSGA012525
N
0.839
BGIOSGA012523
Oryza indica
BGIOSGA012523
N
0.839
PDK_20s1519811g002
Phoenix dactylifera
PDK_20s1519811g002
I
0.832
BGIOSGA032700
Oryza indica
BGIOSGA032700
N
0.832
ONIVA10G05410
Oryza nivara
ONIVA10G05410
N
0.832
OPUNC12G00950
Oryza punctata
OPUNC12G00950
N
0.830
OPUNC11G00930
Oryza punctata
OPUNC11G00930
N
0.829
ORUFI10G06270
Oryza rufipogon
ORUFI10G06270
N
0.829
GRMZM2G063216
Zea mays
GRMZM2G063216
N
0.828
ORUFI12G01160
Oryza rufipogon
ORUFI12G01160
N
0.827
OBART12G00820
Oryza barthii
OBART12G00820
N
0.827
BGIOSGA034615
Oryza indica
BGIOSGA034615
N
0.827
OGLUM05G21420
Oryza glumaepatula
OGLUM05G21420
I
0.827
ORGLA05G0177200
Oryza glaberrima
ORGLA05G0177200
I
0.827
OGLUM12G01270
Oryza glumaepatula
OGLUM12G01270
N
0.827
ORGLA12G0007300
Oryza glaberrima
ORGLA12G0007300
N
0.827
ONIVA05G21440
Oryza nivara
ONIVA05G21440
I
0.827
ONIVA11G01030
Oryza nivara
ONIVA11G01030
N
0.827
ORUFI05G21560
Oryza rufipogon
ORUFI05G21560
I
0.827
OBART11G01090
Oryza barthii
OBART11G01090
N
0.827
OMERI05G18170
Oryza meridionalis
OMERI05G18170
I
0.827
OPUNC11G00940
Oryza punctata
OPUNC11G00940
N
0.827
ORUFI11G01040
Oryza rufipogon
ORUFI11G01040
N
0.827
OPUNC12G00960
Oryza punctata
OPUNC12G00960
N
0.827
BGIOSGA036759
Oryza indica
BGIOSGA036759
N
0.827
OS11G0116900
Oryza sativa
OS11G0116900
N
0.827
LPERR11G00950
Leersia perrieri
LPERR11G00950
N
0.827
OB12G11010
Oryza brachyantha
OB12G11010
N
0.827
BGIOSGA030346
Oryza indica
BGIOSGA030346
I
0.827
OS12G0116400
Oryza sativa
OS12G0116400
N
0.827
OS05G0478400
Oryza sativa
OS05G0478400
I
0.827
LPERR12G01060
Leersia perrieri
LPERR12G01060
N
0.827
ORGLA11G0201700
Oryza glaberrima
ORGLA11G0201700
N
0.827
BRADI4G25717
Brachypodium distachyon
BRADI4G25717
N
0.827
ORUFI11G01010
Oryza rufipogon
ORUFI11G01010
N
0.826
Si011007m.g
Setaria italica
Si011007m.g
N
0.826
Si026831m.g
Setaria italica
Si026831m.g
N
0.826
ONIVA11G01010
Oryza nivara
ONIVA11G01010
N
0.826
MLOC_3853
Hordeum vulgare
MLOC_3853
N
0.826
OGLUM12G01250
Oryza glumaepatula
OGLUM12G01250
N
0.826
BGIOSGA034616
Oryza indica
BGIOSGA034616
N
0.826
OGLUM12G01320
Oryza glumaepatula
OGLUM12G01320
N
0.825
OBART12G00800
Oryza barthii
OBART12G00800
N
0.825
BRADI2G53495
Brachypodium distachyon
BRADI2G53495
I
0.825
ORUFI12G01140
Oryza rufipogon
ORUFI12G01140
N
0.825
OMERI12G00120
Oryza meridionalis
OMERI12G00120
N
0.825
ORGLA12G0007100
Oryza glaberrima
ORGLA12G0007100
N
0.825
ONIVA12G00800
Oryza nivara
ONIVA12G00800
N
0.825
OLONG_028722
Oryza longistaminata
OLONG_028722
N
0.825
BGIOSGA036760
Oryza indica
BGIOSGA036760
N
0.825
F775_28648
Aegilops tauschii
F775_28648
N
0.824
Traes_4BS_A6D9EB0E5
Triticum aestivum
Traes_4BS_A6D9EB0E5
N
0.824
Traes_4AL_9E0D1CFA6
Triticum aestivum
Traes_4AL_9E0D1CFA6
N
0.824
Traes_4DS_FE38A59D0
Triticum aestivum
Traes_4DS_FE38A59D0
N
0.824
Traes_3DL_48F7A19D2
Triticum aestivum
Traes_3DL_48F7A19D2
I
0.824
F775_23182
Aegilops tauschii
F775_23182
I
0.824
OB11G10730
Oryza brachyantha
OB11G10730
N
0.824
OS01G0820700
Oryza sativa
OS01G0820700
I
0.824
BGIOSGA004703
Oryza indica
BGIOSGA004703
I
0.824
ORGLA01G0291800
Oryza glaberrima
ORGLA01G0291800
I
0.824
GSMUA_Achr9G04830_001
Musa acuminata
GSMUA_Achr9G04830_001
I
0.824
ONIVA01G40340
Oryza nivara
ONIVA01G40340
I
0.824
OB11G10740
Oryza brachyantha
OB11G10740
N
0.824
OB01G44140
Oryza brachyantha
OB01G44140
I
0.824
MLOC_34522
Hordeum vulgare
MLOC_34522
N
0.824
OMERI11G01480
Oryza meridionalis
OMERI11G01480
N
0.824
ORUFI01G38660
Oryza rufipogon
ORUFI01G38660
I
0.824
LPERR11G00940
Leersia perrieri
LPERR11G00940
N
0.823
Pavir.J31578
Panicum virgatum
Pavir.J31578
N
0.823
OGLUM05G21470
Oryza glumaepatula
OGLUM05G21470
I
0.823
OBART01G35310
Oryza barthii
OBART01G35310
I
0.823
Traes_3AL_2297D6E18
Triticum aestivum
Traes_3AL_2297D6E18
I
0.823
Sb05g001170
Sorghum bicolor
Sb05g001170
N
0.822
Sb03g038180
Sorghum bicolor
Sb03g038180
I
0.822
OPUNC05G18030
Oryza punctata
OPUNC05G18030
I
0.822
GRMZM2G065290
Zea mays
GRMZM2G065290
I
0.822
Pavir.Ga02545
Panicum virgatum
Pavir.Ga02545
N
0.821
Pavir.J07662
Panicum virgatum
Pavir.J07662
I
0.821
GRMZM2G099593
Zea mays
GRMZM2G099593
N
0.821
OPUNC05G17980
Oryza punctata
OPUNC05G17980
I
0.821
Pavir.J41073
Panicum virgatum
Pavir.J41073
I
0.820
F775_23296
Aegilops tauschii
F775_23296
N
0.819
Pavir.Hb02025
Panicum virgatum
Pavir.Hb02025
N
0.819
Bo4g012750
Brassica oleracea
Bo4g012750
I
0.819
OLONG_027124
Oryza longistaminata
OLONG_027124
I
0.819
OMERI05G18260
Oryza meridionalis
OMERI05G18260
I
0.819
Pavir.Ca00178
Panicum virgatum
Pavir.Ca00178
N
0.819
OBART05G20340
Oryza barthii
OBART05G20340
I
0.819
Si005138m.g
Setaria italica
Si005138m.g
N
0.818
OBART11G01070
Oryza barthii
OBART11G01070
N
0.818
Pavir.J38024
Panicum virgatum
Pavir.J38024
N
0.818
ORGLA11G0201600
Oryza glaberrima
ORGLA11G0201600
N
0.818
OGLUM05G21510
Oryza glumaepatula
OGLUM05G21510
I
0.818
Pavir.J37617
Panicum virgatum
Pavir.J37617
N
0.818
ORGLA05G0177400
Oryza glaberrima
ORGLA05G0177400
I
0.817
GRMZM2G060918
Zea mays
GRMZM2G060918
N
0.817
Si002121m.g
Setaria italica
Si002121m.g
I
0.817
LPERR05G16150
Leersia perrieri
LPERR05G16150
I
0.817
Bostr.9345s0060
Boechera stricta
Bostr.9345s0060
I
0.817
OBART05G20330
Oryza barthii
OBART05G20330
I
0.817
Bra004586
Brassica rapa
Bra004586
I
0.817
GSMUA_Achr7G22020_001
Musa acuminata
GSMUA_Achr7G22020_001
I
0.816
LPERR05G16170
Leersia perrieri
LPERR05G16170
I
0.816
OB05G27850
Oryza brachyantha
OB05G27850
I
0.816
OPUNC05G18000
Oryza punctata
OPUNC05G18000
I
0.816
Pavir.Ia03459
Panicum virgatum
Pavir.Ia03459
N
0.816
orange1.1g018407m.g
Citrus sinensis
orange1.1g018407m.g
I
0.815
MDP0000828055
Malus domestica
MDP0000828055
I
0.815
Ciclev10033384m.g
Citrus clementina
Ciclev10033384m.g
I
0.815
GSMUA_Achr8G25110_001
Musa acuminata
GSMUA_Achr8G25110_001
I
0.815
Sb08g002590
Sorghum bicolor
Sb08g002590
N
0.815
Si026670m.g
Setaria italica
Si026670m.g
N
0.814
LPERR07G11260
Leersia perrieri
LPERR07G11260
I
0.814
Pavir.Ea03257
Panicum virgatum
Pavir.Ea03257
I
0.814
MTR_2g075750
Medicago truncatula
MTR_2g075750
I
0.814
MTR_2g075610
Medicago truncatula
MTR_2g075610
I
0.814
OGLUM05G21440
Oryza glumaepatula
OGLUM05G21440
I
0.813
Si010706m.g
Setaria italica
Si010706m.g
N
0.813
OMERI05G18250
Oryza meridionalis
OMERI05G18250
I
0.812
ONIVA05G21460
Oryza nivara
ONIVA05G21460
I
0.812
WRKY55
Vitis vinifera
VIT_13s0067g03130
I
0.812
OS05G0478800
Oryza sativa
OS05G0478800
I
0.812
ORUFI05G21600
Oryza rufipogon
ORUFI05G21600
I
0.812
GRMZM2G461648
Zea mays
GRMZM2G461648
N
0.812
LPERR01G30490
Leersia perrieri
LPERR01G30490
I
0.812
AMTR_s00077p00103880
Amborella trichopoda
AMTR_s00077p00103880
I
0.812
Si003782m.g
Setaria italica
Si003782m.g
N
0.812
BGIOSGA017860
Oryza indica
BGIOSGA017860
I
0.812
BRADI2G53510
Brachypodium distachyon
BRADI2G53510
I
0.811
WRKY70
Arabidopsis lyrata
fgenesh2_kg.5__2072__AT3G56400.1
I
0.811
MTR_5g067700
Medicago truncatula
MTR_5g067700
I
0.811
Bra014692
Brassica rapa
Bra014692
I
0.810
cassava8741.m1
Manihot esculenta
cassava8741.m1
I
0.810
Thhalv10016713m.g
Eutrema salsugineum
Thhalv10016713m.g
I
0.810
SapurV1A.2126s0010
Salix purpurea
SapurV1A.2126s0010
I
0.810
Bo00913s010
Brassica oleracea
Bo00913s010
I
0.810
OPUNC01G34270
Oryza punctata
OPUNC01G34270
N
0.810
Pavir.Eb03562
Panicum virgatum
Pavir.Eb03562
I
0.809
Pavir.Ea03256
Panicum virgatum
Pavir.Ea03256
N
0.809
PDK_20s1571901g001
Phoenix dactylifera
PDK_20s1571901g001
I
0.809
Traes_3B_8B0D448D8
Triticum aestivum
Traes_3B_8B0D448D8
I
0.809
GLYMA06G14731
Glycine max
GLYMA06G14731
I
0.809
Bo3g035140
Brassica oleracea
Bo3g035140
I
0.809
Si028270m.g
Setaria italica
Si028270m.g
N
0.809
Si027998m.g
Setaria italica
Si027998m.g
N
0.809
Bra000203
Brassica rapa
Bra000203
I
0.809
MLOC_6114
Hordeum vulgare
MLOC_6114
I
0.809
cassava23183.valid.m1
Manihot esculenta
cassava23183.valid.m1
I
0.809
Si027769m.g
Setaria italica
Si027769m.g
N
0.809
TRIUR3_27575
Triticum urartu
TRIUR3_27575
I
0.809
WRKY41
Arabidopsis thaliana
AT4G11070
I
0.809
F775_22564
Aegilops tauschii
F775_22564
I
0.809
Sb02g011050
Sorghum bicolor
Sb02g011050
I
0.809
cassava26362.m1
Manihot esculenta
cassava26362.m1
I
0.808
WRKY70
Arabidopsis thaliana
AT3G56400
D
0.808
POPTR_0001s10490
Populus trichocarpa
POPTR_0001s10490
I
0.808
MTR_7g073430
Medicago truncatula
MTR_7g073430
I
0.808
WRKY54
Arabidopsis thaliana
AT2G40750
I
0.808
Pavir.J18239
Panicum virgatum
Pavir.J18239
I
0.808