CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G53510
(
Brachypodium distachyon
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
BRADI2G53510
T352417_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.812
0.500
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G53510.1
WRKY
41
106
SDGYMWRKYGQKRIMKTRFPRCYYRCSHHRERGCPATKQVQEQQHGDGADHPKTYLVIYVHEHTCR
Links
Other
WRKY
family TFs
Other
Brachypodium distachyon
TFs
201 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_23296
Aegilops tauschii
F775_23296
N
0.864
MLOC_3853
Hordeum vulgare
MLOC_3853
N
0.861
GRMZM2G158328
Zea mays
GRMZM2G158328
I
0.842
Si002121m.g
Setaria italica
Si002121m.g
I
0.839
Sb03g038200
Sorghum bicolor
Sb03g038200
N
0.837
Pavir.Eb03562
Panicum virgatum
Pavir.Eb03562
I
0.834
Pavir.Ea03257
Panicum virgatum
Pavir.Ea03257
I
0.832
Thhalv10016713m.g
Eutrema salsugineum
Thhalv10016713m.g
I
0.831
LPERR01G30490
Leersia perrieri
LPERR01G30490
I
0.830
Bo4g012750
Brassica oleracea
Bo4g012750
I
0.829
cassava7524.valid.m1
Manihot esculenta
cassava7524.valid.m1
I
0.824
ONIVA01G40380
Oryza nivara
ONIVA01G40380
N
0.824
Bra004586
Brassica rapa
Bra004586
I
0.824
ORGLA01G0292000
Oryza glaberrima
ORGLA01G0292000
N
0.824
cassava7525.valid.m1
Manihot esculenta
cassava7525.valid.m1
I
0.824
OGLUM01G39380
Oryza glumaepatula
OGLUM01G39380
N
0.824
BGIOSGA000583
Oryza indica
BGIOSGA000583
N
0.824
ORUFI01G38680
Oryza rufipogon
ORUFI01G38680
N
0.824
OPUNC01G34290
Oryza punctata
OPUNC01G34290
N
0.824
Eucgr.G03145
Eucalyptus grandis
Eucgr.G03145
I
0.824
OMERI01G32500
Oryza meridionalis
OMERI01G32500
N
0.823
SELMODRAFT_113487
Selaginella moellendorffii
SELMODRAFT_113487
I
0.823
SELMODRAFT_29692
Selaginella moellendorffii
SELMODRAFT_29692
I
0.823
OBART01G35360
Oryza barthii
OBART01G35360
N
0.822
MTR_7g073380
Medicago truncatula
MTR_7g073380
I
0.822
WRKY54
Arabidopsis thaliana
AT2G40750
I
0.821
MDP0000828055
Malus domestica
MDP0000828055
I
0.821
PDK_20s1519811g002
Phoenix dactylifera
PDK_20s1519811g002
I
0.821
F775_04954
Aegilops tauschii
F775_04954
N
0.820
TRIUR3_16097
Triticum urartu
TRIUR3_16097
N
0.820
Si003782m.g
Setaria italica
Si003782m.g
N
0.820
Pm019076
Prunus mume
Pm019076
I
0.819
PDK_20s1440981g001
Phoenix dactylifera
PDK_20s1440981g001
I
0.819
LPERR05G16160
Leersia perrieri
LPERR05G16160
N
0.819
Bra003239
Brassica rapa
Bra003239
I
0.819
SELMODRAFT_29702
Selaginella moellendorffii
SELMODRAFT_29702
I
0.819
Bostr.9345s0060
Boechera stricta
Bostr.9345s0060
I
0.819
SELMODRAFT_29703
Selaginella moellendorffii
SELMODRAFT_29703
I
0.819
OPUNC01G34270
Oryza punctata
OPUNC01G34270
N
0.819
Traes_3DL_2551BF2C1
Triticum aestivum
Traes_3DL_2551BF2C1
N
0.818
PRUPE_ppa014826mg
Prunus persica
PRUPE_ppa014826mg
I
0.818
Bo3g035140
Brassica oleracea
Bo3g035140
I
0.818
Al_scaffold_0004_2305
Arabidopsis lyrata
Al_scaffold_0004_2305
I
0.818
MTR_7g073430
Medicago truncatula
MTR_7g073430
I
0.818
GRMZM2G324999
Zea mays
GRMZM2G324999
I
0.818
Pavir.Ib01568
Panicum virgatum
Pavir.Ib01568
I
0.818
Pavir.J05812
Panicum virgatum
Pavir.J05812
I
0.818
fgenesh1_pm.C_scaffold_4001818
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_4001818
I
0.818
Bra000203
Brassica rapa
Bra000203
I
0.818
MDP0000460139
Malus domestica
MDP0000460139
I
0.818
OMERI01G32480
Oryza meridionalis
OMERI01G32480
I
0.817
Gorai.007G014600
Gossypium raimondii
Gorai.007G014600
I
0.817
MLOC_74974
Hordeum vulgare
MLOC_74974
I
0.816
Si002401m.g
Setaria italica
Si002401m.g
I
0.816
Pavir.Ea03256
Panicum virgatum
Pavir.Ea03256
N
0.816
OGLUM05G21430
Oryza glumaepatula
OGLUM05G21430
N
0.816
Cucsa.143830
Cucumis sativus
Cucsa.143830
I
0.816
gene19219-v1.0-hybrid
Fragaria vesca
gene19219-v1.0-hybrid
I
0.816
POPTR_0013s09460
Populus trichocarpa
POPTR_0013s09460
I
0.816
GSMUA_Achr5G08580_001
Musa acuminata
GSMUA_Achr5G08580_001
I
0.816
GLYMA14G36430
Glycine max
GLYMA14G36430
I
0.816
orange1.1g021598m.g
Citrus sinensis
orange1.1g021598m.g
I
0.815
TRAES3BF081400030CFD_g
Triticum aestivum
TRAES3BF081400030CFD_g
I
0.815
Ciclev10032192m.g
Citrus clementina
Ciclev10032192m.g
I
0.815
Cucsa.259110
Cucumis sativus
Cucsa.259110
I
0.815
Sb08g002560
Sorghum bicolor
Sb08g002560
N
0.815
TCM_006103
Theobroma cacao
TCM_006103
I
0.815
Eucgr.D02359
Eucalyptus grandis
Eucgr.D02359
I
0.815
GSMUA_Achr9G04830_001
Musa acuminata
GSMUA_Achr9G04830_001
I
0.815
AC205562.3_FG002
Zea mays
AC205562.3_FG002
I
0.815
OPUNC01G34280
Oryza punctata
OPUNC01G34280
I
0.814
GRMZM2G381378
Zea mays
GRMZM2G381378
I
0.814
Sb07g019400
Sorghum bicolor
Sb07g019400
I
0.814
Si010764m.g
Setaria italica
Si010764m.g
N
0.814
OB05G27840
Oryza brachyantha
OB05G27840
N
0.814
cassava8741.m1
Manihot esculenta
cassava8741.m1
I
0.814
Lus10012870.g
Linum usitatissimum
Lus10012870.g
I
0.814
Cagra.0925s0055
Capsella grandiflora
Cagra.0925s0055
I
0.813
Carubv10017859m.g
Capsella rubella
Carubv10017859m.g
I
0.813
ORUFI01G38630
Oryza rufipogon
ORUFI01G38630
N
0.813
PGSC0003DMG400008776
Solanum tuberosum
PGSC0003DMG400008776
I
0.813
Ciclev10033384m.g
Citrus clementina
Ciclev10033384m.g
I
0.813
OS01G0820400
Oryza sativa
OS01G0820400
N
0.813
cassava23183.valid.m1
Manihot esculenta
cassava23183.valid.m1
I
0.813
OGLUM01G39350
Oryza glumaepatula
OGLUM01G39350
N
0.813
orange1.1g018407m.g
Citrus sinensis
orange1.1g018407m.g
I
0.813
Bra016974
Brassica rapa
Bra016974
I
0.813
OBART01G35280
Oryza barthii
OBART01G35280
N
0.813
GLYMA06G14731
Glycine max
GLYMA06G14731
I
0.813
Pavir.Ea03258
Panicum virgatum
Pavir.Ea03258
I
0.813
ORGLA01G0291600
Oryza glaberrima
ORGLA01G0291600
N
0.813
MTR_5g067700
Medicago truncatula
MTR_5g067700
I
0.813
BGIOSGA004701
Oryza indica
BGIOSGA004701
N
0.813
Al_scaffold_0005_2548
Arabidopsis lyrata
Al_scaffold_0005_2548
I
0.813
OLONG_000628
Oryza longistaminata
OLONG_000628
N
0.813
Lus10014177.g
Linum usitatissimum
Lus10014177.g
I
0.813
OMERI01G32440
Oryza meridionalis
OMERI01G32440
N
0.813
OPUNC01G34260
Oryza punctata
OPUNC01G34260
N
0.813
GLYMA19G44380
Glycine max
GLYMA19G44380
I
0.812
GLYMA14G36446
Glycine max
GLYMA14G36446
I
0.812
Carubv10024972m.g
Capsella rubella
Carubv10024972m.g
I
0.812
Cagra.1642s0039
Capsella grandiflora
Cagra.1642s0039
I
0.812
BRADI2G53500
Brachypodium distachyon
BRADI2G53500
N
0.812
GRMZM2G029292
Zea mays
GRMZM2G029292
I
0.812
Pavir.J34713
Panicum virgatum
Pavir.J34713
N
0.812
Bo6g071110
Brassica oleracea
Bo6g071110
I
0.812
GSMUA_Achr8G01730_001
Musa acuminata
GSMUA_Achr8G01730_001
I
0.812
VIT_13s0067g03140
Vitis vinifera
VIT_13s0067g03140
I
0.812
cassava26362.m1
Manihot esculenta
cassava26362.m1
I
0.812
Lus10030517.g
Linum usitatissimum
Lus10030517.g
I
0.812
Bo4g190390
Brassica oleracea
Bo4g190390
I
0.812
AMTR_s00077p00103880
Amborella trichopoda
AMTR_s00077p00103880
I
0.812
WRKY70
Arabidopsis thaliana
AT3G56400
D
0.812
OB01G44130
Oryza brachyantha
OB01G44130
I
0.812
Pavir.Cb02194
Panicum virgatum
Pavir.Cb02194
I
0.812
Traes_1AL_B24F28600
Triticum aestivum
Traes_1AL_B24F28600
I
0.811
Traes_1BL_B4AFDB663
Triticum aestivum
Traes_1BL_B4AFDB663
I
0.811
SapurV1A.2126s0010
Salix purpurea
SapurV1A.2126s0010
I
0.811
Thhalv10006146m.g
Eutrema salsugineum
Thhalv10006146m.g
I
0.811
TRIUR3_34396
Triticum urartu
TRIUR3_34396
I
0.811
Pavir.J16737
Panicum virgatum
Pavir.J16737
N
0.811
WRKY70
Arabidopsis lyrata
fgenesh2_kg.5__2072__AT3G56400.1
I
0.811
BRADI2G22230
Brachypodium distachyon
BRADI2G22230
I
0.811
evm.TU.supercontig_19.45
Carica papaya
evm.TU.supercontig_19.45
I
0.811
OGLUM11G00850
Oryza glumaepatula
OGLUM11G00850
I
0.811
Carubv10017349m.g
Capsella rubella
Carubv10017349m.g
I
0.811
gene21364-v1.0-hybrid
Fragaria vesca
gene21364-v1.0-hybrid
I
0.811
evm.TU.contig_32256
Carica papaya
evm.TU.contig_32256
I
0.810
30174.m008651
Ricinus communis
30174.m008651
I
0.810
cassava43538.valid.m1
Manihot esculenta
cassava43538.valid.m1
I
0.810
Eucgr.J00107
Eucalyptus grandis
Eucgr.J00107
I
0.810
Pavir.Ib01500
Panicum virgatum
Pavir.Ib01500
N
0.810
Bostr.25463s0359
Boechera stricta
Bostr.25463s0359
I
0.810
SapurV1A.0035s0630
Salix purpurea
SapurV1A.0035s0630
I
0.810
Pavir.J39511
Panicum virgatum
Pavir.J39511
I
0.810
Pavir.J31756
Panicum virgatum
Pavir.J31756
I
0.810
Pavir.Ha01933
Panicum virgatum
Pavir.Ha01933
I
0.810
LjT41F16.60.nd
Lotus japonicus
LjT41F16.60.nd
I
0.810
Pavir.Eb03559
Panicum virgatum
Pavir.Eb03559
I
0.810
Sb01g036870
Sorghum bicolor
Sb01g036870
N
0.810
GRMZM2G034421
Zea mays
GRMZM2G034421
N
0.810
F775_23182
Aegilops tauschii
F775_23182
I
0.810
Bo6g066790
Brassica oleracea
Bo6g066790
I
0.810
OB07G31890
Oryza brachyantha
OB07G31890
I
0.810
Si039519m.g
Setaria italica
Si039519m.g
N
0.810
OB01G44140
Oryza brachyantha
OB01G44140
I
0.810
F775_02926
Aegilops tauschii
F775_02926
N
0.810
ONIVA01G40340
Oryza nivara
ONIVA01G40340
I
0.810
OPUNC07G24890
Oryza punctata
OPUNC07G24890
I
0.810
BRADI2G53495
Brachypodium distachyon
BRADI2G53495
I
0.810
ORUFI01G38660
Oryza rufipogon
ORUFI01G38660
I
0.810
OS01G0820700
Oryza sativa
OS01G0820700
I
0.810
PGSC0003DMG400020608
Solanum tuberosum
PGSC0003DMG400020608
I
0.810
ORGLA01G0291800
Oryza glaberrima
ORGLA01G0291800
I
0.810
GLYMA04G40121
Glycine max
GLYMA04G40121
I
0.810
Traes_3DL_48F7A19D2
Triticum aestivum
Traes_3DL_48F7A19D2
I
0.810
Traes_3AL_2297D6E18
Triticum aestivum
Traes_3AL_2297D6E18
I
0.810
TRIUR3_22129
Triticum urartu
TRIUR3_22129
N
0.810
WRKY55
Vitis vinifera
VIT_13s0067g03130
I
0.810
Cla021486
Citrullus lanatus
Cla021486
I
0.810
BGIOSGA004703
Oryza indica
BGIOSGA004703
I
0.810
TCM_005179
Theobroma cacao
TCM_005179
I
0.810
Traes_1DL_DFE1721E0
Triticum aestivum
Traes_1DL_DFE1721E0
N
0.810
Traes_1AL_309623B48
Triticum aestivum
Traes_1AL_309623B48
N
0.810
GSMUA_Achr7G22020_001
Musa acuminata
GSMUA_Achr7G22020_001
I
0.810
Traes_1BL_46340D685
Triticum aestivum
Traes_1BL_46340D685
N
0.810
LPERR05G16170
Leersia perrieri
LPERR05G16170
I
0.809
WRKY55
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_4001817
I
0.809
F775_31341
Aegilops tauschii
F775_31341
I
0.809
GRMZM2G029282
Zea mays
GRMZM2G029282
N
0.809
GSMUA_Achr7G14140_001
Musa acuminata
GSMUA_Achr7G14140_001
I
0.809
Sb03g038170
Sorghum bicolor
Sb03g038170
I
0.809
Cagra.1642s0038
Capsella grandiflora
Cagra.1642s0038
I
0.809
Si036565m.g
Setaria italica
Si036565m.g
I
0.809
Bostr.9345s0061
Boechera stricta
Bostr.9345s0061
I
0.809
Cucsa.143840
Cucumis sativus
Cucsa.143840
I
0.809
Bo3g035130
Brassica oleracea
Bo3g035130
I
0.809
Si019098m.g
Setaria italica
Si019098m.g
N
0.809
Carubv10023773m.g
Capsella rubella
Carubv10023773m.g
I
0.809
Bra016975
Brassica rapa
Bra016975
I
0.809
Gorai.012G014000
Gossypium raimondii
Gorai.012G014000
I
0.809
Bra000202
Brassica rapa
Bra000202
I
0.809
Sb02g043030
Sorghum bicolor
Sb02g043030
I
0.809
Sb09g023500
Sorghum bicolor
Sb09g023500
N
0.809
PDK_20s1314561g002
Phoenix dactylifera
PDK_20s1314561g002
I
0.808
Bra014693
Brassica rapa
Bra014693
I
0.808
ORGLA05G0177300
Oryza glaberrima
ORGLA05G0177300
N
0.808
Sb01g036180
Sorghum bicolor
Sb01g036180
I
0.808
PRUPE_ppa007708mg
Prunus persica
PRUPE_ppa007708mg
I
0.808
Si004791m.g
Setaria italica
Si004791m.g
I
0.808
Bostr.20129s0455
Boechera stricta
Bostr.20129s0455
I
0.808
Ca_09495
Cicer arietinum
Ca_09495
I
0.808
TRIUR3_31234
Triticum urartu
TRIUR3_31234
N
0.808
ORGLA05G0177400
Oryza glaberrima
ORGLA05G0177400
I
0.808
Pm018401
Prunus mume
Pm018401
I
0.808
MLOC_57051
Hordeum vulgare
MLOC_57051
I
0.808
LPERR07G23280
Leersia perrieri
LPERR07G23280
I
0.808
OBART01G35310
Oryza barthii
OBART01G35310
I
0.808
OBART05G20320
Oryza barthii
OBART05G20320
N
0.808
OBART05G20330
Oryza barthii
OBART05G20330
I
0.808
GRMZM2G382350
Zea mays
GRMZM2G382350
I
0.808