WRKY30 (Arabidopsis lyrata)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 fgenesh2_kg.6__2402__AT5G24110.1 T352590_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY30
M02563_2.00
Arabidopsis thaliana
RGTCAACNNN

NNNGTTGACY
PBM
Weirauch et al.(2014)
pTH7611
0.890 0.983
WRKY30
M07422_2.00
Arabidopsis thaliana
DAAGTCAACGN

NCGTTGACTTH
Dap-seq
OMalley et al.(2016)
WRKY30_col_a
0.890 0.983
WRKY30
M07423_2.00
Arabidopsis thaliana
NNAAGTCAACGNH

DNCGTTGACTTNN
Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a
0.890 0.983
WRKY53
M01090_2.00
Arabidopsis thaliana
RGTCAACNN

NNGTTGACY
PBM
Sullivan et al.(2014)
pTH8245
0.853 0.746
WRKY55
M07392_2.00
Arabidopsis thaliana
HWAGTCAACGNH

DNCGTTGACTWD
Dap-seq
OMalley et al.(2016)
WRKY55_col_a
0.819 0.593
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN

NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.810 0.593
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.6__2402__AT5G24110.1 WRKY 114 174

Links

Other WRKY family TFs
Other Arabidopsis lyrata TFs

Invalid Input OrderBy

418 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action