CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G005207
(
Zea mays
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
GRMZM2G005207
T352791_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY29
M02558_2.00
Arabidopsis thaliana
NNNGTCHDNN
NNHDGACNNN
PBM
Weirauch et al.(2014)
pTH9604
0.816
0.500
WRKY29
M07410_2.00
Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY29_col_a
0.816
0.500
WRKY29
M07411_2.00
Arabidopsis thaliana
HWWAGTCAAMDNN
NNHKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a
0.816
0.500
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM
KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.811
0.467
WRKY22
M02557_2.00
Arabidopsis thaliana
NNNKTMHDNN
NNHDKAMNNN
PBM
Weirauch et al.(2014)
pTH7320
0.808
0.500
WRKY22
M07400_2.00
Arabidopsis thaliana
AAAAGTCAACKNH
DNMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a
0.808
0.500
WRKY22
M07401_2.00
Arabidopsis thaliana
NAAAGTCAACKNH
DNMGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY22_col
0.808
0.500
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G005207_P01
WRKY
111
175
FDGYQWRKYGQKQIEGAMYPRSYYRCIQSAKQGCQAKRTVQRNDDDGATAPPEYTVVYVAEHTCT
Links
Other
WRKY
family TFs
Other
Zea mays
TFs
210 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb08g002520
Sorghum bicolor
Sb08g002520
I
0.884
Pavir.Ca00085
Panicum virgatum
Pavir.Ca00085
N
0.874
Si010813m.g
Setaria italica
Si010813m.g
N
0.874
Pavir.J20374
Panicum virgatum
Pavir.J20374
N
0.873
Pavir.J12092
Panicum virgatum
Pavir.J12092
I
0.870
OBART11G01120
Oryza barthii
OBART11G01120
I
0.862
ONIVA11G01190
Oryza nivara
ONIVA11G01190
I
0.862
OBART12G00860
Oryza barthii
OBART12G00860
I
0.862
ORGLA11G0202100
Oryza glaberrima
ORGLA11G0202100
I
0.862
BGIOSGA034611
Oryza indica
BGIOSGA034611
I
0.862
LPERR12G01100
Leersia perrieri
LPERR12G01100
I
0.862
OGLUM11G00880
Oryza glumaepatula
OGLUM11G00880
I
0.862
BGIOSGA036755
Oryza indica
BGIOSGA036755
I
0.862
ORGLA12G0007700
Oryza glaberrima
ORGLA12G0007700
I
0.862
OB12G11040
Oryza brachyantha
OB12G11040
I
0.859
OMERI11G01580
Oryza meridionalis
OMERI11G01580
I
0.858
OMERI11G01540
Oryza meridionalis
OMERI11G01540
I
0.858
MLOC_68369
Hordeum vulgare
MLOC_68369
N
0.856
OPUNC11G00990
Oryza punctata
OPUNC11G00990
N
0.852
OPUNC12G01000
Oryza punctata
OPUNC12G01000
N
0.852
Traes_5BL_175E7FC38
Triticum aestivum
Traes_5BL_175E7FC38
N
0.851
TRIUR3_24639
Triticum urartu
TRIUR3_24639
N
0.851
Traes_5DL_09F1F8F79
Triticum aestivum
Traes_5DL_09F1F8F79
N
0.851
F775_23346
Aegilops tauschii
F775_23346
N
0.851
BRADI4G44342
Brachypodium distachyon
BRADI4G44342
N
0.845
PDK_20s1314561g002
Phoenix dactylifera
PDK_20s1314561g002
I
0.829
GRMZM2G029292
Zea mays
GRMZM2G029292
I
0.827
Pavir.Ib01568
Panicum virgatum
Pavir.Ib01568
I
0.825
LPERR07G11260
Leersia perrieri
LPERR07G11260
I
0.825
Pavir.J05812
Panicum virgatum
Pavir.J05812
I
0.825
OB11G27340
Oryza brachyantha
OB11G27340
I
0.823
GSMUA_Achr8G25110_001
Musa acuminata
GSMUA_Achr8G25110_001
I
0.822
PDK_20s1571901g001
Phoenix dactylifera
PDK_20s1571901g001
I
0.819
ORGLA05G0177400
Oryza glaberrima
ORGLA05G0177400
I
0.817
GSMUA_Achr5G08580_001
Musa acuminata
GSMUA_Achr5G08580_001
I
0.817
OBART05G20330
Oryza barthii
OBART05G20330
I
0.817
GLYMA06G13090
Glycine max
GLYMA06G13090
I
0.816
Bra019297
Brassica rapa
Bra019297
I
0.816
Si028202m.g
Setaria italica
Si028202m.g
I
0.816
WRKY29
Arabidopsis thaliana
AT4G23550
D
0.816
Carubv10005155m.g
Capsella rubella
Carubv10005155m.g
I
0.816
Bo7g108870
Brassica oleracea
Bo7g108870
I
0.816
Bo3g165850
Brassica oleracea
Bo3g165850
I
0.816
Bostr.7867s0150
Boechera stricta
Bostr.7867s0150
I
0.816
Cagra.1226s0001
Capsella grandiflora
Cagra.1226s0001
I
0.816
Bra020814
Brassica rapa
Bra020814
I
0.816
Bra013708
Brassica rapa
Bra013708
I
0.816
GLYMA04G41701
Glycine max
GLYMA04G41701
I
0.816
Bo7g088570
Brassica oleracea
Bo7g088570
I
0.815
PRUPE_ppa007708mg
Prunus persica
PRUPE_ppa007708mg
I
0.815
Si036565m.g
Setaria italica
Si036565m.g
I
0.815
VIT_02s0025g01280
Vitis vinifera
VIT_02s0025g01280
I
0.815
WRKY29
Arabidopsis lyrata
fgenesh2_kg.7__1947__AT4G23550.1
I
0.815
gene19219-v1.0-hybrid
Fragaria vesca
gene19219-v1.0-hybrid
I
0.815
Pm018401
Prunus mume
Pm018401
I
0.815
GRMZM2G139815
Zea mays
GRMZM2G139815
I
0.815
LPERR01G30490
Leersia perrieri
LPERR01G30490
I
0.815
GLYMA08G02580
Glycine max
GLYMA08G02580
I
0.815
PDK_20s1519811g001
Phoenix dactylifera
PDK_20s1519811g001
I
0.814
GLYMA03G41750
Glycine max
GLYMA03G41750
I
0.814
OB01G44170
Oryza brachyantha
OB01G44170
I
0.814
cassava32454.m1
Manihot esculenta
cassava32454.m1
I
0.814
Pavir.Eb03559
Panicum virgatum
Pavir.Eb03559
I
0.814
MTR_8g098945
Medicago truncatula
MTR_8g098945
I
0.814
VIT_16s0050g02510
Vitis vinifera
VIT_16s0050g02510
I
0.814
BRADI1G63220
Brachypodium distachyon
BRADI1G63220
I
0.814
Pavir.J31756
Panicum virgatum
Pavir.J31756
I
0.814
Eucgr.D02324
Eucalyptus grandis
Eucgr.D02324
I
0.813
GSMUA_Achr6G05710_001
Musa acuminata
GSMUA_Achr6G05710_001
I
0.813
Si004791m.g
Setaria italica
Si004791m.g
I
0.813
Lus10001902.g
Linum usitatissimum
Lus10001902.g
I
0.813
Sb03g038170
Sorghum bicolor
Sb03g038170
I
0.813
OB05G27850
Oryza brachyantha
OB05G27850
I
0.813
GSMUA_Achr7G22020_001
Musa acuminata
GSMUA_Achr7G22020_001
I
0.813
OGLUM05G21440
Oryza glumaepatula
OGLUM05G21440
I
0.813
OPUNC05G18000
Oryza punctata
OPUNC05G18000
I
0.813
Bo1g035810
Brassica oleracea
Bo1g035810
I
0.812
OPUNC01G34290
Oryza punctata
OPUNC01G34290
N
0.812
30169.m006533
Ricinus communis
30169.m006533
I
0.812
GRMZM2G382350
Zea mays
GRMZM2G382350
I
0.812
ORUFI01G38680
Oryza rufipogon
ORUFI01G38680
N
0.812
Thhalv10025799m.g
Eutrema salsugineum
Thhalv10025799m.g
I
0.812
ORGLA01G0292000
Oryza glaberrima
ORGLA01G0292000
N
0.812
OB01G44130
Oryza brachyantha
OB01G44130
I
0.812
ONIVA01G40380
Oryza nivara
ONIVA01G40380
N
0.812
BGIOSGA000583
Oryza indica
BGIOSGA000583
N
0.812
OGLUM01G39380
Oryza glumaepatula
OGLUM01G39380
N
0.812
Gorai.004G134600
Gossypium raimondii
Gorai.004G134600
I
0.812
GSMUA_Achr6G31840_001
Musa acuminata
GSMUA_Achr6G31840_001
I
0.812
PGSC0003DMG400012160
Solanum tuberosum
PGSC0003DMG400012160
I
0.811
WRKY62
Arabidopsis lyrata
Al_scaffold_0006_13
I
0.811
TCM_015346
Theobroma cacao
TCM_015346
I
0.811
WRKY62
Arabidopsis thaliana
AT5G01900
D
0.811
Gorai.009G421200
Gossypium raimondii
Gorai.009G421200
I
0.811
Gorai.012G014000
Gossypium raimondii
Gorai.012G014000
I
0.811
Si003782m.g
Setaria italica
Si003782m.g
N
0.811
GSMUA_Achr7G14140_001
Musa acuminata
GSMUA_Achr7G14140_001
I
0.811
GLYMA05G36970
Glycine max
GLYMA05G36970
I
0.811
PK21971.1
Cannabis sativa
PK21971.1
I
0.811
Sb02g011050
Sorghum bicolor
Sb02g011050
I
0.811
Cucsa.212870
Cucumis sativus
Cucsa.212870
I
0.811
LjSGA_021425.1
Lotus japonicus
LjSGA_021425.1
I
0.811
Sb01g036180
Sorghum bicolor
Sb01g036180
I
0.811
Cla019945
Citrullus lanatus
Cla019945
I
0.811
Solyc08g082110.2
Solanum lycopersicum
Solyc08g082110.2
I
0.810
TRAES3BF081400030CFD_g
Triticum aestivum
TRAES3BF081400030CFD_g
I
0.810
Eucgr.G00258
Eucalyptus grandis
Eucgr.G00258
I
0.810
Lus10032372.g
Linum usitatissimum
Lus10032372.g
I
0.810
Pavir.Ba02750
Panicum virgatum
Pavir.Ba02750
I
0.810
Pavir.Bb01218
Panicum virgatum
Pavir.Bb01218
I
0.810
Pavir.Db02095
Panicum virgatum
Pavir.Db02095
I
0.810
Lus10023099.g
Linum usitatissimum
Lus10023099.g
I
0.810
gene13108-v1.0-hybrid
Fragaria vesca
gene13108-v1.0-hybrid
I
0.810
LjSGA_058050.1
Lotus japonicus
LjSGA_058050.1
I
0.810
mgf008735m
Mimulus guttatus
mgf008735m
I
0.810
mgf020540m
Mimulus guttatus
mgf020540m
I
0.810
Eucgr.J02653
Eucalyptus grandis
Eucgr.J02653
I
0.810
LjT41F16.60.nd
Lotus japonicus
LjT41F16.60.nd
I
0.810
OS05G0478800
Oryza sativa
OS05G0478800
I
0.810
MTR_3g090860
Medicago truncatula
MTR_3g090860
I
0.810
OMERI05G18250
Oryza meridionalis
OMERI05G18250
I
0.810
ONIVA05G21460
Oryza nivara
ONIVA05G21460
I
0.810
Bra019265
Brassica rapa
Bra019265
I
0.810
Bra000203
Brassica rapa
Bra000203
I
0.810
BGIOSGA017860
Oryza indica
BGIOSGA017860
I
0.810
Bo3g035140
Brassica oleracea
Bo3g035140
I
0.810
ORUFI05G21600
Oryza rufipogon
ORUFI05G21600
I
0.810
OMERI01G32500
Oryza meridionalis
OMERI01G32500
N
0.810
MTR_8g028565
Medicago truncatula
MTR_8g028565
I
0.809
OBART01G35280
Oryza barthii
OBART01G35280
N
0.809
OGLUM01G39350
Oryza glumaepatula
OGLUM01G39350
N
0.809
MDP0000602139
Malus domestica
MDP0000602139
I
0.809
MDP0000909869
Malus domestica
MDP0000909869
I
0.809
MTR_7g079040
Medicago truncatula
MTR_7g079040
I
0.809
orange1.1g019126m.g
Citrus sinensis
orange1.1g019126m.g
I
0.809
OGLUM05G21510
Oryza glumaepatula
OGLUM05G21510
I
0.809
Gorai.005G003900
Gossypium raimondii
Gorai.005G003900
I
0.809
SELMODRAFT_29703
Selaginella moellendorffii
SELMODRAFT_29703
I
0.809
Ciclev10020943m.g
Citrus clementina
Ciclev10020943m.g
I
0.809
Eucgr.E00098
Eucalyptus grandis
Eucgr.E00098
I
0.809
OMERI01G32480
Oryza meridionalis
OMERI01G32480
I
0.809
OLONG_000628
Oryza longistaminata
OLONG_000628
N
0.809
POPTR_0012s01380
Populus trichocarpa
POPTR_0012s01380
I
0.809
POPTR_0014s08600
Populus trichocarpa
POPTR_0014s08600
I
0.809
GSMUA_Achr5G07490_001
Musa acuminata
GSMUA_Achr5G07490_001
I
0.809
Si030531m.g
Setaria italica
Si030531m.g
I
0.809
PK09209.1
Cannabis sativa
PK09209.1
I
0.809
PRUPE_ppa007745mg
Prunus persica
PRUPE_ppa007745mg
I
0.809
chr1.LjT16J16.70.nd
Lotus japonicus
chr1.LjT16J16.70.nd
I
0.809
chr4.CM0025.230.nd
Lotus japonicus
chr4.CM0025.230.nd
I
0.809
SELMODRAFT_29702
Selaginella moellendorffii
SELMODRAFT_29702
I
0.809
Sb03g038190
Sorghum bicolor
Sb03g038190
N
0.809
SapurV1A.1043s0030
Salix purpurea
SapurV1A.1043s0030
I
0.809
SapurV1A.0377s0020
Salix purpurea
SapurV1A.0377s0020
I
0.809
GLYMA16G03570
Glycine max
GLYMA16G03570
I
0.809
GLYMA18G47300
Glycine max
GLYMA18G47300
I
0.809
GLYMA09G39040
Glycine max
GLYMA09G39040
I
0.809
SapurV1A.0013s1050
Salix purpurea
SapurV1A.0013s1050
I
0.809
SapurV1A.0099s0300
Salix purpurea
SapurV1A.0099s0300
I
0.809
SapurV1A.0029s0340
Salix purpurea
SapurV1A.0029s0340
I
0.809
TCM_005261
Theobroma cacao
TCM_005261
I
0.809
OMERI01G32440
Oryza meridionalis
OMERI01G32440
N
0.809
WRKY22
Vitis vinifera
VIT_15s0046g02190
I
0.809
Ca_03952
Cicer arietinum
Ca_03952
I
0.809
30174.m008663
Ricinus communis
30174.m008663
I
0.809
OPUNC05G18030
Oryza punctata
OPUNC05G18030
I
0.809
cassava40183.m1
Manihot esculenta
cassava40183.m1
I
0.809
ORUFI01G38630
Oryza rufipogon
ORUFI01G38630
N
0.809
OPUNC12G00230
Oryza punctata
OPUNC12G00230
I
0.809
Pm018219
Prunus mume
Pm018219
I
0.809
Ca_17759
Cicer arietinum
Ca_17759
I
0.809
Cla010134
Citrullus lanatus
Cla010134
I
0.809
Ca_06167
Cicer arietinum
Ca_06167
I
0.809
ORGLA01G0291600
Oryza glaberrima
ORGLA01G0291600
N
0.809
Cla021523
Citrullus lanatus
Cla021523
I
0.809
Cucsa.107310
Cucumis sativus
Cucsa.107310
I
0.809
cassava46457.m1
Manihot esculenta
cassava46457.m1
I
0.809
POPTR_0002s16590
Populus trichocarpa
POPTR_0002s16590
I
0.809
TCM_006103
Theobroma cacao
TCM_006103
I
0.809
OPUNC01G34260
Oryza punctata
OPUNC01G34260
N
0.809
OS01G0820400
Oryza sativa
OS01G0820400
N
0.809
Cucsa.311060
Cucumis sativus
Cucsa.311060
I
0.809
Cucsa.258700
Cucumis sativus
Cucsa.258700
I
0.809
OPUNC01G34270
Oryza punctata
OPUNC01G34270
N
0.809
BGIOSGA036760
Oryza indica
BGIOSGA036760
N
0.808
WRKY22
Arabidopsis thaliana
AT4G01250
D
0.808
BGIOSGA004701
Oryza indica
BGIOSGA004701
N
0.808
ORGLA12G0007100
Oryza glaberrima
ORGLA12G0007100
N
0.808
TCM_006116
Theobroma cacao
TCM_006116
I
0.808
ORUFI12G01140
Oryza rufipogon
ORUFI12G01140
N
0.808
Thhalv10028843m.g
Eutrema salsugineum
Thhalv10028843m.g
I
0.808
Cla011097
Citrullus lanatus
Cla011097
I
0.808
Bo9g003610
Brassica oleracea
Bo9g003610
I
0.808
Pavir.Da02163
Panicum virgatum
Pavir.Da02163
I
0.808
ONIVA12G00800
Oryza nivara
ONIVA12G00800
N
0.808
OLONG_028722
Oryza longistaminata
OLONG_028722
N
0.808
OGLUM12G01320
Oryza glumaepatula
OGLUM12G01320
N
0.808
Bostr.10064s0007
Boechera stricta
Bostr.10064s0007
I
0.808
Eucgr.D02359
Eucalyptus grandis
Eucgr.D02359
I
0.808
OMERI12G00120
Oryza meridionalis
OMERI12G00120
N
0.808
Bostr.9345s0060
Boechera stricta
Bostr.9345s0060
I
0.808
OBART12G00800
Oryza barthii
OBART12G00800
N
0.808
MDP0000767097
Malus domestica
MDP0000767097
I
0.808
WRKY22
Arabidopsis lyrata
fgenesh2_kg.6__3581__AT4G01250.1
I
0.808
F775_07376
Aegilops tauschii
F775_07376
I
0.808
Carubv10001446m.g
Capsella rubella
Carubv10001446m.g
I
0.808
LPERR01G30500
Leersia perrieri
LPERR01G30500
I
0.808
30174.m008651
Ricinus communis
30174.m008651
I
0.808
OPUNC07G11930
Oryza punctata
OPUNC07G11930
I
0.808
Bra037368
Brassica rapa
Bra037368
I
0.808