CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G158328
(
Zea mays
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
GRMZM2G158328
T352860_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM
KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.813
0.483
WRKY63
M02546_2.00
Arabidopsis thaliana
NGGTCAAN
NTTGACCN
PBM
Weirauch et al.(2014)
pTH8182
0.812
0.500
WRKY21
M02553_2.00
Arabidopsis thaliana
NNRGTCAAMN
NKTTGACYNN
PBM
Weirauch et al.(2014)
pTH7422
0.811
0.500
WRKY21
M07389_2.00
Arabidopsis thaliana
HAAAGTCAACNNH
DNNGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a
0.811
0.500
WRKY21
M07390_2.00
Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_col
0.811
0.500
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G158328_P01
WRKY
121
184
SDGYQWRKYGQKRITKSPFPRCYYKCSFHRERSCRATKQVQQCSDGDGHPPQYVVMYFNEHTCD
Links
Other
WRKY
family TFs
Other
Zea mays
TFs
186 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb03g038200
Sorghum bicolor
Sb03g038200
N
0.887
Si002121m.g
Setaria italica
Si002121m.g
I
0.887
Pavir.Eb03562
Panicum virgatum
Pavir.Eb03562
I
0.879
Pavir.Ea03257
Panicum virgatum
Pavir.Ea03257
I
0.875
Pavir.J33941
Panicum virgatum
Pavir.J33941
N
0.845
MLOC_3853
Hordeum vulgare
MLOC_3853
N
0.843
BRADI2G53510
Brachypodium distachyon
BRADI2G53510
I
0.842
F775_23296
Aegilops tauschii
F775_23296
N
0.837
LPERR01G30490
Leersia perrieri
LPERR01G30490
I
0.828
SELMODRAFT_113487
Selaginella moellendorffii
SELMODRAFT_113487
I
0.826
SELMODRAFT_29692
Selaginella moellendorffii
SELMODRAFT_29692
I
0.826
Si004791m.g
Setaria italica
Si004791m.g
I
0.820
Carubv10022120m.g
Capsella rubella
Carubv10022120m.g
I
0.820
Pavir.Eb03559
Panicum virgatum
Pavir.Eb03559
I
0.820
Pavir.J31756
Panicum virgatum
Pavir.J31756
I
0.820
Sb01g036180
Sorghum bicolor
Sb01g036180
I
0.818
BRADI1G63220
Brachypodium distachyon
BRADI1G63220
I
0.818
OGLUM01G39380
Oryza glumaepatula
OGLUM01G39380
N
0.817
ORGLA01G0292000
Oryza glaberrima
ORGLA01G0292000
N
0.817
Bostr.26959s0262
Boechera stricta
Bostr.26959s0262
I
0.817
Carubv10021899m.g
Capsella rubella
Carubv10021899m.g
I
0.817
ORUFI01G38680
Oryza rufipogon
ORUFI01G38680
N
0.817
ONIVA01G40380
Oryza nivara
ONIVA01G40380
N
0.817
OPUNC01G34290
Oryza punctata
OPUNC01G34290
N
0.817
BGIOSGA000583
Oryza indica
BGIOSGA000583
N
0.817
GRMZM2G382350
Zea mays
GRMZM2G382350
I
0.816
F775_07376
Aegilops tauschii
F775_07376
I
0.816
Si036565m.g
Setaria italica
Si036565m.g
I
0.816
OMERI01G32500
Oryza meridionalis
OMERI01G32500
N
0.815
Traes_4AS_0DA136E0E
Triticum aestivum
Traes_4AS_0DA136E0E
I
0.815
GRMZM2G029292
Zea mays
GRMZM2G029292
I
0.815
Bostr.20129s0455
Boechera stricta
Bostr.20129s0455
I
0.814
OGLUM01G39350
Oryza glumaepatula
OGLUM01G39350
N
0.814
ORUFI01G38630
Oryza rufipogon
ORUFI01G38630
N
0.814
Sb08g002590
Sorghum bicolor
Sb08g002590
N
0.814
ORUFI01G38670
Oryza rufipogon
ORUFI01G38670
I
0.814
OBART01G35350
Oryza barthii
OBART01G35350
I
0.814
OMERI01G32440
Oryza meridionalis
OMERI01G32440
N
0.814
OPUNC01G34270
Oryza punctata
OPUNC01G34270
N
0.814
OPUNC01G34260
Oryza punctata
OPUNC01G34260
N
0.814
Sb02g011050
Sorghum bicolor
Sb02g011050
I
0.814
ORGLA01G0291900
Oryza glaberrima
ORGLA01G0291900
I
0.814
ORGLA01G0291600
Oryza glaberrima
ORGLA01G0291600
N
0.814
BGIOSGA004704
Oryza indica
BGIOSGA004704
I
0.814
OS01G0820400
Oryza sativa
OS01G0820400
N
0.814
Bostr.25463s0359
Boechera stricta
Bostr.25463s0359
I
0.814
ONIVA01G40370
Oryza nivara
ONIVA01G40370
I
0.814
BGIOSGA004701
Oryza indica
BGIOSGA004701
N
0.814
Sb03g038170
Sorghum bicolor
Sb03g038170
I
0.814
OLONG_000628
Oryza longistaminata
OLONG_000628
N
0.814
OBART01G35280
Oryza barthii
OBART01G35280
N
0.814
OGLUM05G21510
Oryza glumaepatula
OGLUM05G21510
I
0.813
WRKY62
Arabidopsis lyrata
Al_scaffold_0006_13
I
0.813
OGLUM05G21430
Oryza glumaepatula
OGLUM05G21430
N
0.813
OMERI01G32480
Oryza meridionalis
OMERI01G32480
I
0.813
TRAES3BF081400030CFD_g
Triticum aestivum
TRAES3BF081400030CFD_g
I
0.813
WRKY64
Arabidopsis thaliana
AT1G66560
I
0.813
OB05G27840
Oryza brachyantha
OB05G27840
N
0.813
OB03G26140
Oryza brachyantha
OB03G26140
I
0.813
WRKY62
Arabidopsis thaliana
AT5G01900
D
0.813
Bostr.26959s0259
Boechera stricta
Bostr.26959s0259
I
0.812
OS03G0335200
Oryza sativa
OS03G0335200
I
0.812
OPUNC05G18030
Oryza punctata
OPUNC05G18030
I
0.812
Pavir.Ib01500
Panicum virgatum
Pavir.Ib01500
N
0.812
F775_04954
Aegilops tauschii
F775_04954
N
0.812
Sb01g036870
Sorghum bicolor
Sb01g036870
N
0.812
gene16584-v1.0-hybrid
Fragaria vesca
gene16584-v1.0-hybrid
I
0.812
OMERI03G14670
Oryza meridionalis
OMERI03G14670
I
0.812
BGIOSGA012571
Oryza indica
BGIOSGA012571
I
0.812
ORUFI03G16960
Oryza rufipogon
ORUFI03G16960
I
0.812
OLONG_024544
Oryza longistaminata
OLONG_024544
I
0.812
OGLUM03G16780
Oryza glumaepatula
OGLUM03G16780
I
0.812
ONIVA03G17390
Oryza nivara
ONIVA03G17390
I
0.812
OBART03G16400
Oryza barthii
OBART03G16400
I
0.812
OB01G44150
Oryza brachyantha
OB01G44150
I
0.812
Si039519m.g
Setaria italica
Si039519m.g
N
0.812
ORGLA05G0177400
Oryza glaberrima
ORGLA05G0177400
I
0.812
OBART05G20330
Oryza barthii
OBART05G20330
I
0.812
OB01G44130
Oryza brachyantha
OB01G44130
I
0.812
TRIUR3_31234
Triticum urartu
TRIUR3_31234
N
0.812
WRKY63
Arabidopsis thaliana
AT1G66600
D
0.812
TRIUR3_16097
Triticum urartu
TRIUR3_16097
N
0.812
WRKY21
Arabidopsis thaliana
AT2G30590
D
0.811
Thhalv10016853m.g
Eutrema salsugineum
Thhalv10016853m.g
I
0.811
Bo4g173290
Brassica oleracea
Bo4g173290
I
0.811
Bo4g056260
Brassica oleracea
Bo4g056260
I
0.811
Bo3g024750
Brassica oleracea
Bo3g024750
I
0.811
Lus10014177.g
Linum usitatissimum
Lus10014177.g
I
0.811
Carubv10023424m.g
Capsella rubella
Carubv10023424m.g
I
0.811
GSMUA_Achr7G22020_001
Musa acuminata
GSMUA_Achr7G22020_001
I
0.811
Bra018303
Brassica rapa
Bra018303
I
0.811
WRKY21
Arabidopsis lyrata
scaffold_401549.1
I
0.811
cassava33373.m1
Manihot esculenta
cassava33373.m1
I
0.811
OBART05G20340
Oryza barthii
OBART05G20340
I
0.811
28455.m000362
Ricinus communis
28455.m000362
I
0.811
Bostr.24513s0175
Boechera stricta
Bostr.24513s0175
I
0.811
WRKY67
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000969
I
0.811
OMERI05G18260
Oryza meridionalis
OMERI05G18260
I
0.811
Bra021652
Brassica rapa
Bra021652
I
0.811
Cagra.0567s0023
Capsella grandiflora
Cagra.0567s0023
I
0.811
TCM_016012
Theobroma cacao
TCM_016012
I
0.811
Bra022808
Brassica rapa
Bra022808
I
0.811
ORUFI01G38660
Oryza rufipogon
ORUFI01G38660
I
0.810
Traes_3DL_48F7A19D2
Triticum aestivum
Traes_3DL_48F7A19D2
I
0.810
OS01G0820700
Oryza sativa
OS01G0820700
I
0.810
Traes_3AL_2297D6E18
Triticum aestivum
Traes_3AL_2297D6E18
I
0.810
PRUPE_ppa023256mg
Prunus persica
PRUPE_ppa023256mg
I
0.810
Pm023533
Prunus mume
Pm023533
I
0.810
OPUNC01G34280
Oryza punctata
OPUNC01G34280
I
0.810
MLOC_66612
Hordeum vulgare
MLOC_66612
I
0.810
OGLUM05G21470
Oryza glumaepatula
OGLUM05G21470
I
0.810
ONIVA01G40340
Oryza nivara
ONIVA01G40340
I
0.810
Bra008459
Brassica rapa
Bra008459
I
0.810
Bo2g095820
Brassica oleracea
Bo2g095820
I
0.810
BRADI2G53495
Brachypodium distachyon
BRADI2G53495
I
0.810
OB01G44140
Oryza brachyantha
OB01G44140
I
0.810
OB05G27850
Oryza brachyantha
OB05G27850
I
0.810
GRMZM2G063216
Zea mays
GRMZM2G063216
N
0.810
OBART01G35360
Oryza barthii
OBART01G35360
N
0.810
ORGLA01G0291800
Oryza glaberrima
ORGLA01G0291800
I
0.810
F775_23182
Aegilops tauschii
F775_23182
I
0.810
BGIOSGA004703
Oryza indica
BGIOSGA004703
I
0.810
MLOC_56247
Hordeum vulgare
MLOC_56247
I
0.809
Sb08g020270
Sorghum bicolor
Sb08g020270
I
0.809
Lus10021999.g
Linum usitatissimum
Lus10021999.g
I
0.809
Lus10042538.g
Linum usitatissimum
Lus10042538.g
I
0.809
GRMZM2G034421
Zea mays
GRMZM2G034421
N
0.809
Traes_5AS_433D3E526
Triticum aestivum
Traes_5AS_433D3E526
I
0.809
Thhalv10000686m.g
Eutrema salsugineum
Thhalv10000686m.g
I
0.809
Traes_5BS_E0345D5DF
Triticum aestivum
Traes_5BS_E0345D5DF
I
0.809
Traes_5DS_D83DEA9B0
Triticum aestivum
Traes_5DS_D83DEA9B0
I
0.809
cassava43475.valid.m1
Manihot esculenta
cassava43475.valid.m1
I
0.809
MDP0000231993
Malus domestica
MDP0000231993
I
0.809
MDP0000234335
Malus domestica
MDP0000234335
I
0.809
MDP0000828055
Malus domestica
MDP0000828055
I
0.809
OPUNC05G18000
Oryza punctata
OPUNC05G18000
I
0.809
LPERR12G01060
Leersia perrieri
LPERR12G01060
N
0.808
LPERR03G13630
Leersia perrieri
LPERR03G13630
N
0.808
LPERR11G00950
Leersia perrieri
LPERR11G00950
N
0.808
Aquca_049_00050
Aquilegia coerulea
Aquca_049_00050
I
0.808
BRADI1G63910
Brachypodium distachyon
BRADI1G63910
N
0.808
BGIOSGA034615
Oryza indica
BGIOSGA034615
N
0.808
BGIOSGA036756
Oryza indica
BGIOSGA036756
N
0.808
BGIOSGA012525
Oryza indica
BGIOSGA012525
N
0.808
BGIOSGA012523
Oryza indica
BGIOSGA012523
N
0.808
WRKY67
Arabidopsis thaliana
AT1G66550
I
0.808
BGIOSGA036759
Oryza indica
BGIOSGA036759
N
0.808
orange1.1g018255m.g
Citrus sinensis
orange1.1g018255m.g
I
0.808
F775_31089
Aegilops tauschii
F775_31089
N
0.808
BRADI4G25717
Brachypodium distachyon
BRADI4G25717
N
0.808
BRADI4G02680
Brachypodium distachyon
BRADI4G02680
I
0.808
Ciclev10028715m.g
Citrus clementina
Ciclev10028715m.g
I
0.808
GRMZM2G030272
Zea mays
GRMZM2G030272
N
0.808
Traes_4BL_A8C6FBEB6
Triticum aestivum
Traes_4BL_A8C6FBEB6
N
0.808
OS12G0116400
Oryza sativa
OS12G0116400
N
0.808
OS11G0116900
Oryza sativa
OS11G0116900
N
0.808
OS03G0321700
Oryza sativa
OS03G0321700
N
0.808
OS12G0116700
Oryza sativa
OS12G0116700
N
0.808
OPUNC05G17980
Oryza punctata
OPUNC05G17980
I
0.808
ONIVA11G01030
Oryza nivara
ONIVA11G01030
N
0.808
OPUNC03G15030
Oryza punctata
OPUNC03G15030
N
0.808
OPUNC11G00940
Oryza punctata
OPUNC11G00940
N
0.808
OPUNC12G00960
Oryza punctata
OPUNC12G00960
N
0.808
ORGLA11G0201700
Oryza glaberrima
ORGLA11G0201700
N
0.808
ORGLA12G0007300
Oryza glaberrima
ORGLA12G0007300
N
0.808
ORGLA03G0148400
Oryza glaberrima
ORGLA03G0148400
N
0.808
ORUFI03G16080
Oryza rufipogon
ORUFI03G16080
N
0.808
ORUFI12G01160
Oryza rufipogon
ORUFI12G01160
N
0.808
ORUFI11G01040
Oryza rufipogon
ORUFI11G01040
N
0.808
ONIVA03G16490
Oryza nivara
ONIVA03G16490
N
0.808
OLONG_001744
Oryza longistaminata
OLONG_001744
N
0.808
Traes_3DL_2551BF2C1
Triticum aestivum
Traes_3DL_2551BF2C1
N
0.808
OB03G25300
Oryza brachyantha
OB03G25300
N
0.808
Traes_4AS_70DF607CC
Triticum aestivum
Traes_4AS_70DF607CC
N
0.808
ORGLA12G0007600
Oryza glaberrima
ORGLA12G0007600
N
0.808
TRIUR3_06231
Triticum urartu
TRIUR3_06231
N
0.808
Traes_4DL_3140A8240
Triticum aestivum
Traes_4DL_3140A8240
N
0.808
OB12G11010
Oryza brachyantha
OB12G11010
N
0.808
OBART03G15470
Oryza barthii
OBART03G15470
N
0.808
OGLUM03G15660
Oryza glumaepatula
OGLUM03G15660
N
0.808
OGLUM12G01270
Oryza glumaepatula
OGLUM12G01270
N
0.808
OBART12G00850
Oryza barthii
OBART12G00850
N
0.808
OBART12G00820
Oryza barthii
OBART12G00820
N
0.808
Si028202m.g
Setaria italica
Si028202m.g
I
0.808
OBART11G01090
Oryza barthii
OBART11G01090
N
0.808
MLOC_57764
Hordeum vulgare
MLOC_57764
N
0.808