GSMUA_Achr3G20450_001 (Musa acuminata)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 GSMUA_Achr3G20450_001 T352953_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK25870.1
M01325_2.00
Cannabis sativa
NRGTCAAM

KTTGACYN
PBM
Lambert et al.(2019)
pTH10156
0.864 0.845
WRKY51
M02568_2.00
Arabidopsis thaliana
NNRGTCAANN

NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7478
0.849 0.793
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN

NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.846 0.810
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN

NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.846 0.810
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG

CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.824 0.672
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM

KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.824 0.672
WRKY48
M02565_2.00
Arabidopsis thaliana
NNVGTCADNN

NNHTGACBNN
PBM
Weirauch et al.(2014)
pTH7552
0.823 0.690
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN

NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.822 0.707
WRKY28
M07406_2.00
Arabidopsis thaliana
HAAAGTCAAMNNH

DNNKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY28_col_a
0.820 0.690
WRKY28
M07407_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a
0.820 0.690
WRKY8
M02564_2.00
Arabidopsis thaliana
NRGTCAAHN

NDTTGACYN
PBM
Weirauch et al.(2014)
pTH7554
0.820 0.672
WRKY8
M07428_2.00
Arabidopsis thaliana
NAAAAGTCAACRNHW

WDNYGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a
0.820 0.672
WRKY8
M07429_2.00
Arabidopsis thaliana
NNVAAAGTCAACRNH

DNYGTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY8_col
0.820 0.672
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN

NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.817 0.672
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN

NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.814 0.655
WRKY45
M00899_2.00
Arabidopsis thaliana
NNRGTCAAMGN

NCKTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY45
0.809 0.569
WRKY45
M07397_2.00
Arabidopsis thaliana
NAAAAGTCAAMD

HKTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY45_col_a
0.809 0.569
WRKY45
M07398_2.00
Arabidopsis thaliana
MAAAGTCAAMV

BKTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY45_colamp_a
0.809 0.569
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P20450_001 WRKY 9 66

Links

Other WRKY family TFs
Other Musa acuminata TFs

Invalid Input OrderBy

805 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action