CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_1g077780
(
Medicago truncatula
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
MTR_1g077780
T353239_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN
NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.808
0.569
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH42899
WRKY
62
119
EDGYNWRKYGEQVCIGNPNPRSYYKCTAPGCSIRKCVERAWVDPKDVITTYVGRHNHD
Links
Other
WRKY
family TFs
Other
Medicago truncatula
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g011483m.g
Citrus sinensis
orange1.1g011483m.g
I
0.837
chr2.CM0641.70.nc
Lotus japonicus
chr2.CM0641.70.nc
I
0.836
Pavir.Bb02418
Panicum virgatum
Pavir.Bb02418
I
0.835
Si029342m.g
Setaria italica
Si029342m.g
I
0.835
ONIVA04G13890
Oryza nivara
ONIVA04G13890
I
0.835
GRMZM2G151407
Zea mays
GRMZM2G151407
I
0.835
Sb02g027950
Sorghum bicolor
Sb02g027950
I
0.835
GRMZM2G052671
Zea mays
GRMZM2G052671
I
0.835
Pavir.J40119
Panicum virgatum
Pavir.J40119
I
0.835
evm.TU.supercontig_12.196
Carica papaya
evm.TU.supercontig_12.196
I
0.832
GLYMA06G37100
Glycine max
GLYMA06G37100
I
0.832
TRIUR3_10262
Triticum urartu
TRIUR3_10262
I
0.831
Ca_13524
Cicer arietinum
Ca_13524
I
0.829
MLOC_67851
Hordeum vulgare
MLOC_67851
I
0.828
GRMZM2G449681
Zea mays
GRMZM2G449681
I
0.826
Lus10026409.g
Linum usitatissimum
Lus10026409.g
I
0.826
Traes_5AL_E566BD64E
Triticum aestivum
Traes_5AL_E566BD64E
I
0.826
Pavir.J13787
Panicum virgatum
Pavir.J13787
I
0.824
OS09G0481700
Oryza sativa
OS09G0481700
I
0.824
SELMODRAFT_59955
Selaginella moellendorffii
SELMODRAFT_59955
I
0.824
OPUNC09G12700
Oryza punctata
OPUNC09G12700
I
0.824
ORUFI09G15250
Oryza rufipogon
ORUFI09G15250
I
0.824
OBART09G14210
Oryza barthii
OBART09G14210
I
0.824
OB04G23060
Oryza brachyantha
OB04G23060
I
0.824
MLOC_58019
Hordeum vulgare
MLOC_58019
I
0.824
OLONG_005396
Oryza longistaminata
OLONG_005396
I
0.824
OGLUM09G14860
Oryza glumaepatula
OGLUM09G14860
I
0.824
ORGLA09G0109100
Oryza glaberrima
ORGLA09G0109100
I
0.824
ONIVA09G14780
Oryza nivara
ONIVA09G14780
I
0.824
BGIOSGA029574
Oryza indica
BGIOSGA029574
I
0.824
OMERI09G11000
Oryza meridionalis
OMERI09G11000
I
0.824
GLYMA17G24700
Glycine max
GLYMA17G24700
I
0.822
LjSGA_069579.1
Lotus japonicus
LjSGA_069579.1
I
0.818
Bo6g034690
Brassica oleracea
Bo6g034690
I
0.813
MDP0000788581
Malus domestica
MDP0000788581
I
0.813
Bra038006
Brassica rapa
Bra038006
I
0.809
OMERI04G23060
Oryza meridionalis
OMERI04G23060
I
0.809
Si031470m.g
Setaria italica
Si031470m.g
I
0.808