OBART05G24090 (Oryza barthii)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 OBART05G24090 T353483_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK25870.1
M01325_2.00
Cannabis sativa
NRGTCAAM

KTTGACYN
PBM
Lambert et al.(2019)
pTH10156
0.857 0.810
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN

NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.847 0.793
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN

NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.847 0.793
WRKY51
M02568_2.00
Arabidopsis thaliana
NNRGTCAANN

NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7478
0.842 0.776
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG

CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.832 0.724
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM

KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.832 0.724
WRKY48
M02565_2.00
Arabidopsis thaliana
NNVGTCADNN

NNHTGACBNN
PBM
Weirauch et al.(2014)
pTH7552
0.829 0.741
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN

NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.827 0.724
WRKY28
M07406_2.00
Arabidopsis thaliana
HAAAGTCAAMNNH

DNNKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY28_col_a
0.825 0.707
WRKY28
M07407_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a
0.825 0.707
WRKY8
M02564_2.00
Arabidopsis thaliana
NRGTCAAHN

NDTTGACYN
PBM
Weirauch et al.(2014)
pTH7554
0.825 0.690
WRKY8
M07428_2.00
Arabidopsis thaliana
NAAAAGTCAACRNHW

WDNYGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a
0.825 0.690
WRKY8
M07429_2.00
Arabidopsis thaliana
NNVAAAGTCAACRNH

DNYGTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY8_col
0.825 0.690
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN

NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.820 0.690
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN

NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.820 0.638
WRKY11
M02559_2.00
Arabidopsis thaliana
NDGTCAAHNN

NNDTTGACHN
PBM
Weirauch et al.(2014)
pTH8091
0.811 0.569
WRKY11
M07415_2.00
Arabidopsis thaliana
NHAAAGTCAACBNH

DNVGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY11_col_a
0.811 0.569
WRKY11
M11464_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY11_Q2
0.811 0.569
WRKY45
M00899_2.00
Arabidopsis thaliana
NNRGTCAAMGN

NCKTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY45
0.809 0.621
WRKY45
M07397_2.00
Arabidopsis thaliana
NAAAAGTCAAMD

HKTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY45_col_a
0.809 0.621
WRKY45
M07398_2.00
Arabidopsis thaliana
MAAAGTCAAMV

BKTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY45_colamp_a
0.809 0.621
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART05G24090.1 WRKY 135 192

Links

Other WRKY family TFs
Other Oryza barthii TFs

928 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.000
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.000
NECAME_04545 Necator americanus NECAME_04545 I 0.000
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.000
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.000
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.000
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.000
L893_g29555 Steinernema glaseri L893_g29555 I 0.000
L892_g650 Steinernema scapterisci L892_g650 I 0.000
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.000
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.000
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.000
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.000
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.000
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.000
SVUK_0001012101 Strongylus vulgaris SVUK_0001012101 I 0.000
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.000
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.000
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.000
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.000
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.000
Bm14724 Brugia malayi Bm14724 I 0.000
CBG07552 Caenorhabditis briggsae CBG07552 I 0.000
CBN19233 Caenorhabditis brenneri CBN19233 I 0.000
CJA13646 Caenorhabditis japonica CJA13646 I 0.000
CRE15289 Caenorhabditis remanei CRE15289 I 0.000
LOAG_18352 Loa loa LOAG_18352 I 0.000
PPA20304 Pristionchus pacificus PPA20304 I 0.000
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.000
Minc01725 Meloidogyne incognita Minc01725 I 0.000
Minc13525 Meloidogyne incognita Minc13525 I 0.000
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.000
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.000
ASU_10946 Ascaris suum ASU_10946 I 0.000
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.000
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.000
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.000
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.000