ONIVA08G21410 (Oryza nivara)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 ONIVA08G21410 T353848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY33
M02554_2.00
Arabidopsis thaliana
NNRGTCHDNN

NNHDGACYNN
PBM
Weirauch et al.(2014)
pTH8183
0.863 0.851
WRKY33
M07391_2.00
Arabidopsis thaliana
HWWAGTCAAMD

HKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY33_col_a
0.863 0.851
WRKY26
M07418_2.00
Arabidopsis thaliana
MWAAGTCAACGNH

DNCGTTGACTWWK
Dap-seq
OMalley et al.(2016)
WRKY26_col_a
0.861 0.807
WRKY26
M07419_2.00
Arabidopsis thaliana
HMWAGTCAAMR

YKTTGACTWKD
Dap-seq
OMalley et al.(2016)
WRKY26_colamp_a
0.861 0.807
Q40090_IPOBA
M11466_2.00
Ipomoea batatas Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPF1_Q2
0.859 0.842
PK05432.1
M01324_2.00
Cannabis sativa
NNRGTCARH

DYTGACYNN
PBM
Lambert et al.(2019)
pTH11342
0.853 0.816
WRKY3
M07381_2.00
Arabidopsis thaliana
MAWAGTCAAMR

YKTTGACTWTK
Dap-seq
OMalley et al.(2016)
WRKY3_col_a
0.853 0.781
WRKY2
M02567_2.00
Arabidopsis thaliana
BRGTCAAM

KTTGACYV
PBM
Weirauch et al.(2014)
pTH8832
0.853 0.851
WRKY25
M02552_2.00
Arabidopsis thaliana
YRGTCAAM

KTTGACYR
PBM
Weirauch et al.(2014)
pTH8810
0.852 0.728
WRKY25
M07387_2.00
Arabidopsis thaliana
HWWRGTCAAMR

YKTTGACYWWD
Dap-seq
OMalley et al.(2016)
WRKY25_col_a
0.852 0.728
WRKY25
M07388_2.00
Arabidopsis thaliana
NNNHWRGTCAACRNH

DNYGTTGACYWDNNN
Dap-seq
OMalley et al.(2016)
WRKY25_colamp_a
0.852 0.728
WRKY20
M07414_2.00
Arabidopsis thaliana
HHHRGTCAAMGNH

DNCKTTGACYDDD
Dap-seq
OMalley et al.(2016)
WRKY20_col_a
0.851 0.798
ZAP1
M02726_2.00
Arabidopsis thaliana
DRCKCGGTCAA

TTGACCGMGYH
SELEX
Mathelier et al.(2014)
MA0589.1
0.832 0.684
ZAP1
M11463_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_01
0.832 0.684
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA08G21410.1 WRKY 251 306
ONIVA08G21410.1 WRKY 462 519
ONIVA08G21410.2 WRKY 275 330
ONIVA08G21410.2 WRKY 486 543
ONIVA08G21410.3 WRKY 265 320
ONIVA08G21410.3 WRKY 476 533

Links

Other WRKY family TFs
Other Oryza nivara TFs

795 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSGMOG00000012808 Gadus morhua ENSGMOG00000012808 N 0.000
ENSONIG00000020071 Oreochromis niloticus ENSONIG00000020071 N 0.000
ENSPFOG00000002906 Poecilia formosa ENSPFOG00000002906 N 0.000
irf3 Gasterosteus aculeatus ENSGACG00000007945 N 0.000
irf3 Oryzias latipes ENSORLG00000006703 N 0.000
irf3 Tetraodon nigroviridis ENSTNIG00000015191 N 0.000
irf3 Takifugu rubripes ENSTRUG00000012031 N 0.000