PGSC0003DMG400005836 (Solanum tuberosum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 PGSC0003DMG400005836 T354244_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY53
M01090_2.00 		Arabidopsis thaliana
RGTCAACNN
NNGTTGACY		 PBM
Sullivan et al.(2014)
pTH8245 		0.838 0.692
WRKY30
M02563_2.00 		Arabidopsis thaliana
RGTCAACNNN
NNNGTTGACY		 PBM
Weirauch et al.(2014)
pTH7611 		0.831 0.615
WRKY30
M07422_2.00 		Arabidopsis thaliana
DAAGTCAACGN
NCGTTGACTTH		 Dap-seq
OMalley et al.(2016)
WRKY30_col_a 		0.831 0.615
WRKY30
M07423_2.00 		Arabidopsis thaliana
NNAAGTCAACGNH
DNCGTTGACTTNN		 Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a 		0.831 0.615
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400014951 WRKY 122 173

Links

Other WRKY family TFs
Other Solanum tuberosum TFs

Invalid Input OrderBy

321 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action