PGSC0003DMG400009103 (Solanum tuberosum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 PGSC0003DMG400009103 T354254_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY53
M01090_2.00 		Arabidopsis thaliana
RGTCAACNN
NNGTTGACY		 PBM
Sullivan et al.(2014)
pTH8245 		0.840 0.763
WRKY30
M02563_2.00 		Arabidopsis thaliana
RGTCAACNNN
NNNGTTGACY		 PBM
Weirauch et al.(2014)
pTH7611 		0.839 0.729
WRKY30
M07422_2.00 		Arabidopsis thaliana
DAAGTCAACGN
NCGTTGACTTH		 Dap-seq
OMalley et al.(2016)
WRKY30_col_a 		0.839 0.729
WRKY30
M07423_2.00 		Arabidopsis thaliana
NNAAGTCAACGNH
DNCGTTGACTTNN		 Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a 		0.839 0.729
WRKY46
M07395_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY46_col_a 		0.819 0.712
WRKY46
M07396_2.00 		Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD		 Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a 		0.819 0.712
WRKY11
M02559_2.00 		Arabidopsis thaliana
NDGTCAAHNN
NNDTTGACHN		 PBM
Weirauch et al.(2014)
pTH8091 		0.814 0.559
WRKY11
M07415_2.00 		Arabidopsis thaliana
NHAAAGTCAACBNH
DNVGTTGACTTTDN		 Dap-seq
OMalley et al.(2016)
WRKY11_col_a 		0.814 0.559
WRKY11
M11464_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY11_Q2 		0.814 0.559
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.814 0.627
WRKY17
M02550_2.00 		Arabidopsis thaliana
NNDGTCAAHN
NDTTGACHNN		 PBM
Weirauch et al.(2014)
pTH8088 		0.809 0.542
WRKY17
M07385_2.00 		Arabidopsis thaliana
NHAAAGTCAACRNN
NNYGTTGACTTTDN		 Dap-seq
OMalley et al.(2016)
WRKY17_col_a 		0.809 0.542
WRKY17
M07386_2.00 		Arabidopsis thaliana
NMAAAGTCAACGN
NCGTTGACTTTKN		 Dap-seq
OMalley et al.(2016)
WRKY17_colamp_a 		0.809 0.542
Q40828_PETCR
M11467_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY_Q2 		0.808 0.542
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400023502 WRKY 143 203

Links

Other WRKY family TFs
Other Solanum tuberosum TFs

Invalid Input OrderBy

534 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action