PGSC0003DMG400020608 (Solanum tuberosum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 PGSC0003DMG400020608 T354281_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.843 0.633
WRKY46
M07395_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY46_col_a 		0.813 0.550
WRKY46
M07396_2.00 		Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD		 Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a 		0.813 0.550
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400053122 WRKY 116 177

Links

Other WRKY family TFs
Other Solanum tuberosum TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.900
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.846
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I 0.843
WRKY70 Arabidopsis thaliana AT3G56400 D 0.843
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.843
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.842
Bra003239 Brassica rapa Bra003239 I 0.840
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.840
Bo6g071110 Brassica oleracea Bo6g071110 I 0.840
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.839
Bo8g090820 Brassica oleracea Bo8g090820 I 0.837
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.835
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.835
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.834
Bra007243 Brassica rapa Bra007243 I 0.834
29729.m002369 Ricinus communis 29729.m002369 I 0.833
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.833
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.832
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.832
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I 0.832
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.831
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.831
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.830
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.830
29915.m000479 Ricinus communis 29915.m000479 I 0.830
PK03324.1 Cannabis sativa PK03324.1 I 0.829
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.829
Pm003014 Prunus mume Pm003014 I 0.829
Cagra.0925s0056 Capsella grandiflora Cagra.0925s0056 I 0.827
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.827
PK21378.1 Cannabis sativa PK21378.1 I 0.827
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.826
Cla018337 Citrullus lanatus Cla018337 I 0.826
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.826
Bra014692 Brassica rapa Bra014692 I 0.826
gene21365-v1.0-hybrid Fragaria vesca gene21365-v1.0-hybrid I 0.826
Carubv10017349m.g Capsella rubella Carubv10017349m.g I 0.826
Bo00913s010 Brassica oleracea Bo00913s010 I 0.826
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.826
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.826
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.826
GLYMA04G40121 Glycine max GLYMA04G40121 I 0.825
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.824
PRUPE_ppa026125mg Prunus persica PRUPE_ppa026125mg I 0.824
Pm019286 Prunus mume Pm019286 I 0.823
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.823
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.823
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.823
Ca_09495 Cicer arietinum Ca_09495 I 0.822
Pm003015 Prunus mume Pm003015 I 0.821
Lus10029021.g Linum usitatissimum Lus10029021.g I 0.821
Bra016974 Brassica rapa Bra016974 I 0.821
Bo4g190390 Brassica oleracea Bo4g190390 I 0.821
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.821
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.821
Lus10030517.g Linum usitatissimum Lus10030517.g I 0.821
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I 0.820
Gorai.012G013900 Gossypium raimondii Gorai.012G013900 I 0.820
Ca_12915 Cicer arietinum Ca_12915 I 0.820
GLYMA14G36430 Glycine max GLYMA14G36430 I 0.820
Gorai.009G292600 Gossypium raimondii Gorai.009G292600 I 0.820
mgf016988m Mimulus guttatus mgf016988m N 0.819
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.819
Lus10014177.g Linum usitatissimum Lus10014177.g I 0.819
Lus10034244.g Linum usitatissimum Lus10034244.g I 0.819
TCM_045555 Theobroma cacao TCM_045555 I 0.818
Gorai.010G219200 Gossypium raimondii Gorai.010G219200 I 0.818
TCM_019689 Theobroma cacao TCM_019689 I 0.818
mgf002542m Mimulus guttatus mgf002542m I 0.818
Aquca_030_00182 Aquilegia coerulea Aquca_030_00182 I 0.818
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.818
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I 0.818
Gorai.012G014000 Gossypium raimondii Gorai.012G014000 I 0.818
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I 0.817
Lus10025133.g Linum usitatissimum Lus10025133.g I 0.817
POPTR_0013s09470 Populus trichocarpa POPTR_0013s09470 I 0.817
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.817
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.817
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.817
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.817
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.817
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.817
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.817
Lus10012870.g Linum usitatissimum Lus10012870.g I 0.816
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.816
TCM_045556 Theobroma cacao TCM_045556 I 0.816
MLOC_74974 Hordeum vulgare MLOC_74974 I 0.816
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.816
Bo4g012750 Brassica oleracea Bo4g012750 I 0.816
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.816
GSMUA_Achr9G04830_001 Musa acuminata GSMUA_Achr9G04830_001 I 0.816
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.816
gene13546-v1.0-hybrid Fragaria vesca gene13546-v1.0-hybrid I 0.815
mgf026576m Mimulus guttatus mgf026576m I 0.815
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.815
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.815
MDP0000828055 Malus domestica MDP0000828055 I 0.814
MDP0000754989 Malus domestica MDP0000754989 I 0.814
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.814
Bo6g066790 Brassica oleracea Bo6g066790 I 0.814
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.814
Bo3g035140 Brassica oleracea Bo3g035140 I 0.813
Ca_04100 Cicer arietinum Ca_04100 I 0.813
WRKY46 Arabidopsis thaliana AT2G46400 D 0.813
GRMZM2G025895 Zea mays GRMZM2G025895 I 0.813
GRMZM2G061408 Zea mays GRMZM2G061408 I 0.813
Pavir.Ea03257 Panicum virgatum Pavir.Ea03257 I 0.813
Pm003013 Prunus mume Pm003013 I 0.813
29729.m002370 Ricinus communis 29729.m002370 I 0.813
GLYMA06G14731 Glycine max GLYMA06G14731 I 0.813
Bra004586 Brassica rapa Bra004586 I 0.813
Cla007424 Citrullus lanatus Cla007424 I 0.813
Bra000203 Brassica rapa Bra000203 I 0.813
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I 0.812
ORUFI05G12690 Oryza rufipogon ORUFI05G12690 I 0.812
ONIVA05G12080 Oryza nivara ONIVA05G12080 I 0.812
OMERI05G10350 Oryza meridionalis OMERI05G10350 I 0.812
ONIVA05G12100 Oryza nivara ONIVA05G12100 I 0.812
OPUNC05G10010 Oryza punctata OPUNC05G10010 I 0.812
LPERR05G09130 Leersia perrieri LPERR05G09130 I 0.812
OLONG_021880 Oryza longistaminata OLONG_021880 I 0.812
OGLUM05G12420 Oryza glumaepatula OGLUM05G12420 I 0.812
LPERR05G09170 Leersia perrieri LPERR05G09170 I 0.812
Pavir.Ca01708 Panicum virgatum Pavir.Ca01708 I 0.812
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.812
OBART05G11690 Oryza barthii OBART05G11690 I 0.812
BRADI2G30800 Brachypodium distachyon BRADI2G30800 I 0.812
ORGLA05G0099300 Oryza glaberrima ORGLA05G0099300 I 0.812
Si025307m.g Setaria italica Si025307m.g I 0.812
Sb08g005080 Sorghum bicolor Sb08g005080 I 0.812
BGIOSGA019621 Oryza indica BGIOSGA019621 I 0.812
OS05G0321900 Oryza sativa OS05G0321900 I 0.812
Al_scaffold_0005_2548 Arabidopsis lyrata Al_scaffold_0005_2548 I 0.812
BGIOSGA019620 Oryza indica BGIOSGA019620 I 0.812
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.812
TCM_006116 Theobroma cacao TCM_006116 I 0.812
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.811
Aquca_013_00135 Aquilegia coerulea Aquca_013_00135 I 0.811
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.811
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.811
Cagra.0925s0055 Capsella grandiflora Cagra.0925s0055 I 0.811
Bra000202 Brassica rapa Bra000202 I 0.811
Carubv10017859m.g Capsella rubella Carubv10017859m.g I 0.811
Bo3g035130 Brassica oleracea Bo3g035130 I 0.811
Bra008459 Brassica rapa Bra008459 I 0.811
BRADI2G45480 Brachypodium distachyon BRADI2G45480 I 0.811
Bo2g095820 Brassica oleracea Bo2g095820 I 0.811
OGLUM05G12430 Oryza glumaepatula OGLUM05G12430 I 0.811
OS05G0322900 Oryza sativa OS05G0322900 I 0.811
ORUFI05G12710 Oryza rufipogon ORUFI05G12710 I 0.811
ORGLA05G0099400 Oryza glaberrima ORGLA05G0099400 I 0.811
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.811
Ca_21669 Cicer arietinum Ca_21669 I 0.811
TRAES3BF051200110CFD_g Triticum aestivum TRAES3BF051200110CFD_g I 0.811
Ca_18932 Cicer arietinum Ca_18932 I 0.811
OBART05G11710 Oryza barthii OBART05G11710 I 0.811
29729.m002330 Ricinus communis 29729.m002330 I 0.811
cassava8741.m1 Manihot esculenta cassava8741.m1 I 0.811
OMERI05G10380 Oryza meridionalis OMERI05G10380 I 0.811
OPUNC05G10020 Oryza punctata OPUNC05G10020 I 0.811
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.810
SapurV1A.2126s0010 Salix purpurea SapurV1A.2126s0010 I 0.810
MDP0000460139 Malus domestica MDP0000460139 I 0.810
Thhalv10017926m.g Eutrema salsugineum Thhalv10017926m.g I 0.810
evm.TU.contig_32256 Carica papaya evm.TU.contig_32256 I 0.810
TCM_005179 Theobroma cacao TCM_005179 I 0.810
OB0086G10030 Oryza brachyantha OB0086G10030 I 0.810
GRMZM2G127064 Zea mays GRMZM2G127064 I 0.810
Cucsa.078810 Cucumis sativus Cucsa.078810 I 0.810
TRIUR3_29889 Triticum urartu TRIUR3_29889 I 0.810
Traes_3AL_6E92D4E1F Triticum aestivum Traes_3AL_6E92D4E1F I 0.810
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.810
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.810
Si030531m.g Setaria italica Si030531m.g I 0.810
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.810
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.810
Bra014693 Brassica rapa Bra014693 I 0.810
BRADI2G53510 Brachypodium distachyon BRADI2G53510 I 0.810
Bo4g190380 Brassica oleracea Bo4g190380 I 0.810
Cagra.1642s0039 Capsella grandiflora Cagra.1642s0039 I 0.810
Carubv10024972m.g Capsella rubella Carubv10024972m.g I 0.810
MTR_3g093830 Medicago truncatula MTR_3g093830 I 0.809
OLONG_010067 Oryza longistaminata OLONG_010067 I 0.809
OBART05G26430 Oryza barthii OBART05G26430 I 0.809
OGLUM05G28080 Oryza glumaepatula OGLUM05G28080 I 0.809
MTR_5g067700 Medicago truncatula MTR_5g067700 I 0.809
Pavir.Ca02012 Panicum virgatum Pavir.Ca02012 I 0.809
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I 0.809
F775_25856 Aegilops tauschii F775_25856 I 0.809
Bra016975 Brassica rapa Bra016975 I 0.809
WRKY55 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001817 I 0.809
OMERI03G30520 Oryza meridionalis OMERI03G30520 I 0.809
LPERR09G04330 Leersia perrieri LPERR09G04330 I 0.809
Pavir.Cb01173 Panicum virgatum Pavir.Cb01173 I 0.809
ORUFI05G28340 Oryza rufipogon ORUFI05G28340 I 0.809
ONIVA05G28480 Oryza nivara ONIVA05G28480 I 0.809
Si022702m.g Setaria italica Si022702m.g I 0.809
Eucgr.J00107 Eucalyptus grandis Eucgr.J00107 I 0.809
cassava26362.m1 Manihot esculenta cassava26362.m1 I 0.809
mgf009193m Mimulus guttatus mgf009193m I 0.809
Cagra.1642s0038 Capsella grandiflora Cagra.1642s0038 I 0.809
POPTR_0013s09460 Populus trichocarpa POPTR_0013s09460 I 0.809
OS05G0571200 Oryza sativa OS05G0571200 I 0.809
OPUNC05G24020 Oryza punctata OPUNC05G24020 I 0.809
Eucgr.G03144 Eucalyptus grandis Eucgr.G03144 I 0.809
ORGLA03G0413100 Oryza glaberrima ORGLA03G0413100 I 0.809
ORGLA05G0229200 Oryza glaberrima ORGLA05G0229200 I 0.809
Lus10022736.g Linum usitatissimum Lus10022736.g I 0.809
Carubv10023773m.g Capsella rubella Carubv10023773m.g I 0.809
Bostr.9345s0061 Boechera stricta Bostr.9345s0061 I 0.809
Cla015244 Citrullus lanatus Cla015244 I 0.808
MDP0000578301 Malus domestica MDP0000578301 I 0.808
Ciclev10005165m.g Citrus clementina Ciclev10005165m.g I 0.808
Pavir.J03334 Panicum virgatum Pavir.J03334 I 0.808
cassava7221.valid.m1 Manihot esculenta cassava7221.valid.m1 I 0.808
Bostr.25993s0129 Boechera stricta Bostr.25993s0129 I 0.808