PGSC0003DMG400027582 (Solanum tuberosum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 PGSC0003DMG400027582 T354292_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.825 0.567
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.814 0.583
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.813 0.533
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400070939 WRKY 94 155

Links

Other WRKY family TFs
Other Solanum tuberosum TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.870
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.867
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.866
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.866
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.857
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.855
TCM_019689 Theobroma cacao TCM_019689 I 0.854
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.853
29915.m000479 Ricinus communis 29915.m000479 I 0.853
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.853
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.853
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.851
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.851
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.847
Cla018337 Citrullus lanatus Cla018337 I 0.847
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.846
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.845
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.845
PK03324.1 Cannabis sativa PK03324.1 I 0.845
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.844
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.844
29729.m002369 Ricinus communis 29729.m002369 I 0.843
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.842
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.840
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.840
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.840
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.839
Ca_18932 Cicer arietinum Ca_18932 I 0.838
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.838
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.838
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.837
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.836
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.836
Pm003015 Prunus mume Pm003015 I 0.835
Ca_09495 Cicer arietinum Ca_09495 I 0.835
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.835
Pm003013 Prunus mume Pm003013 I 0.834
GLYMA13G34281 Glycine max GLYMA13G34281 I 0.833
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.833
Lus10030517.g Linum usitatissimum Lus10030517.g I 0.832
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.832
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.831
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.831
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.830
Ca_12915 Cicer arietinum Ca_12915 I 0.830
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.830
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.830
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.830
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.830
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.829
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.829
MDP0000175240 Malus domestica MDP0000175240 I 0.829
Cla007424 Citrullus lanatus Cla007424 I 0.828
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.828
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.827
gene13546-v1.0-hybrid Fragaria vesca gene13546-v1.0-hybrid I 0.827
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I 0.826
mgf002542m Mimulus guttatus mgf002542m I 0.826
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.826
Pm003014 Prunus mume Pm003014 I 0.825
WRKY70 Arabidopsis thaliana AT3G56400 D 0.825
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.825
PK21378.1 Cannabis sativa PK21378.1 I 0.825
Ca_04100 Cicer arietinum Ca_04100 I 0.824
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.823
Bo6g071110 Brassica oleracea Bo6g071110 I 0.823
Bra003239 Brassica rapa Bra003239 I 0.823
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.823
PRUPE_ppa026125mg Prunus persica PRUPE_ppa026125mg I 0.823
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I 0.823
mgf016988m Mimulus guttatus mgf016988m N 0.823
Pm019286 Prunus mume Pm019286 I 0.823
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.823
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.823
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I 0.823
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.822
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.822
mgf009193m Mimulus guttatus mgf009193m I 0.822
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I 0.822
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.821
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.821
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.821
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.821
POPTR_0013s09470 Populus trichocarpa POPTR_0013s09470 I 0.820
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.820
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.820
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I 0.820
MTR_3g093830 Medicago truncatula MTR_3g093830 I 0.819
Lus10025133.g Linum usitatissimum Lus10025133.g I 0.819
Lus10029021.g Linum usitatissimum Lus10029021.g I 0.819
MDP0000754989 Malus domestica MDP0000754989 I 0.819
Bra002421 Brassica rapa Bra002421 I 0.818
Sb08g005080 Sorghum bicolor Sb08g005080 I 0.818
Lus10012870.g Linum usitatissimum Lus10012870.g I 0.818
Bo01002s040 Brassica oleracea Bo01002s040 I 0.818
Pavir.Cb01173 Panicum virgatum Pavir.Cb01173 I 0.817
Pavir.Ca02012 Panicum virgatum Pavir.Ca02012 I 0.817
Bo4g012750 Brassica oleracea Bo4g012750 I 0.817
Si022702m.g Setaria italica Si022702m.g I 0.817
Lus10034244.g Linum usitatissimum Lus10034244.g I 0.817
Bra016975 Brassica rapa Bra016975 I 0.817
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.817
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I 0.816
Gorai.009G292600 Gossypium raimondii Gorai.009G292600 I 0.816
Eucgr.G03144 Eucalyptus grandis Eucgr.G03144 I 0.816
Si025181m.g Setaria italica Si025181m.g I 0.816
Bo3g035130 Brassica oleracea Bo3g035130 I 0.816
Bra000202 Brassica rapa Bra000202 I 0.816
TCM_045556 Theobroma cacao TCM_045556 I 0.815
Si030531m.g Setaria italica Si030531m.g I 0.815
MTR_8g032510 Medicago truncatula MTR_8g032510 N 0.815
ONIVA05G12100 Oryza nivara ONIVA05G12100 I 0.815
Bo4g190380 Brassica oleracea Bo4g190380 I 0.815
BGIOSGA019621 Oryza indica BGIOSGA019621 I 0.815
Thhalv10017926m.g Eutrema salsugineum Thhalv10017926m.g I 0.815
Bo6g066790 Brassica oleracea Bo6g066790 I 0.815
OS05G0322900 Oryza sativa OS05G0322900 I 0.814
Pavir.Gb01556 Panicum virgatum Pavir.Gb01556 I 0.814
OMERI05G10380 Oryza meridionalis OMERI05G10380 I 0.814
LPERR03G14340 Leersia perrieri LPERR03G14340 I 0.814
Carubv10023773m.g Capsella rubella Carubv10023773m.g I 0.814
Cagra.1642s0038 Capsella grandiflora Cagra.1642s0038 I 0.814
OGLUM05G12430 Oryza glumaepatula OGLUM05G12430 I 0.814
Bo8g090820 Brassica oleracea Bo8g090820 I 0.814
Bo00913s010 Brassica oleracea Bo00913s010 I 0.814
OBART05G11710 Oryza barthii OBART05G11710 I 0.814
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.814
Bra000203 Brassica rapa Bra000203 I 0.814
Bostr.9345s0061 Boechera stricta Bostr.9345s0061 I 0.814
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I 0.814
gene21365-v1.0-hybrid Fragaria vesca gene21365-v1.0-hybrid I 0.814
Bra014692 Brassica rapa Bra014692 I 0.814
WRKY55 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001817 I 0.814
ORUFI05G12710 Oryza rufipogon ORUFI05G12710 I 0.814
WRKY63 Arabidopsis thaliana AT1G66600 D 0.814
Lus10014177.g Linum usitatissimum Lus10014177.g I 0.814
GLYMA13G34251 Glycine max GLYMA13G34251 I 0.814
GRMZM2G382350 Zea mays GRMZM2G382350 I 0.814
OPUNC05G10020 Oryza punctata OPUNC05G10020 I 0.814
ORGLA05G0099400 Oryza glaberrima ORGLA05G0099400 I 0.814
Bo3g035140 Brassica oleracea Bo3g035140 I 0.814
Bra004586 Brassica rapa Bra004586 I 0.814
chr1.CM0320.400.nd Lotus japonicus chr1.CM0320.400.nd I 0.814
GLYMA04G40121 Glycine max GLYMA04G40121 I 0.813
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N 0.813
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.813
Aquca_013_00135 Aquilegia coerulea Aquca_013_00135 I 0.813
WRKY55 Arabidopsis thaliana AT2G40740 D 0.813
GRMZM2G025895 Zea mays GRMZM2G025895 I 0.812
SapurV1A.2295s0010 Salix purpurea SapurV1A.2295s0010 I 0.812
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.812
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I 0.812
GLYMA14G36430 Glycine max GLYMA14G36430 I 0.812
GRMZM2G061408 Zea mays GRMZM2G061408 I 0.812
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.812
OB05G17240 Oryza brachyantha OB05G17240 I 0.812
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.812
SapurV1A.0190s0060 Salix purpurea SapurV1A.0190s0060 I 0.812
mgf026576m Mimulus guttatus mgf026576m I 0.812
GRMZM2G029292 Zea mays GRMZM2G029292 I 0.811
Pavir.Ca01708 Panicum virgatum Pavir.Ca01708 I 0.811
ORGLA05G0099300 Oryza glaberrima ORGLA05G0099300 I 0.811
BRADI2G30800 Brachypodium distachyon BRADI2G30800 I 0.811
OS05G0321900 Oryza sativa OS05G0321900 I 0.811
Bra014693 Brassica rapa Bra014693 I 0.811
Bra007243 Brassica rapa Bra007243 I 0.811
Gorai.012G014000 Gossypium raimondii Gorai.012G014000 I 0.811
Gorai.010G219200 Gossypium raimondii Gorai.010G219200 I 0.811
Si025307m.g Setaria italica Si025307m.g I 0.811
OPUNC05G10010 Oryza punctata OPUNC05G10010 I 0.811
ORUFI05G12690 Oryza rufipogon ORUFI05G12690 I 0.811
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.811
Cagra.1642s0039 Capsella grandiflora Cagra.1642s0039 I 0.811
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.811
ONIVA05G12080 Oryza nivara ONIVA05G12080 I 0.811
OBART05G11690 Oryza barthii OBART05G11690 I 0.811
OGLUM05G12420 Oryza glumaepatula OGLUM05G12420 I 0.811
OLONG_021880 Oryza longistaminata OLONG_021880 I 0.811
MLOC_74974 Hordeum vulgare MLOC_74974 I 0.811
Carubv10024972m.g Capsella rubella Carubv10024972m.g I 0.811
29729.m002370 Ricinus communis 29729.m002370 I 0.811
LPERR05G09170 Leersia perrieri LPERR05G09170 I 0.811
OMERI05G10350 Oryza meridionalis OMERI05G10350 I 0.811
Carubv10017349m.g Capsella rubella Carubv10017349m.g I 0.811
BGIOSGA019620 Oryza indica BGIOSGA019620 I 0.811
Bra016974 Brassica rapa Bra016974 I 0.810
WRKY64 Arabidopsis thaliana AT1G66560 I 0.810
LPERR05G09130 Leersia perrieri LPERR05G09130 I 0.810
Bo4g190390 Brassica oleracea Bo4g190390 I 0.810
F775_02479 Aegilops tauschii F775_02479 N 0.810
Sb03g038170 Sorghum bicolor Sb03g038170 I 0.810
Cucsa.143830 Cucumis sativus Cucsa.143830 I 0.810
TRIUR3_26571 Triticum urartu TRIUR3_26571 N 0.810
MLOC_71897 Hordeum vulgare MLOC_71897 I 0.810
Si004791m.g Setaria italica Si004791m.g I 0.810
Si036565m.g Setaria italica Si036565m.g I 0.810
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.809
BGIOSGA012571 Oryza indica BGIOSGA012571 I 0.809
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.809
Pavir.J03334 Panicum virgatum Pavir.J03334 I 0.809
Bo4g114050 Brassica oleracea Bo4g114050 I 0.809
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.809
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I 0.809
OLONG_024544 Oryza longistaminata OLONG_024544 I 0.809
OBART03G16400 Oryza barthii OBART03G16400 I 0.809
LPERR08G11030 Leersia perrieri LPERR08G11030 I 0.809
Cagra.0925s0055 Capsella grandiflora Cagra.0925s0055 I 0.809
OMERI03G14670 Oryza meridionalis OMERI03G14670 I 0.809
ONIVA03G17390 Oryza nivara ONIVA03G17390 I 0.809
Si012735m.g Setaria italica Si012735m.g I 0.809
OS03G0335200 Oryza sativa OS03G0335200 I 0.809
Solyc05g050330.2 Solanum lycopersicum Solyc05g050330.2 I 0.809
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I 0.809
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.809
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.809
GRMZM2G127064 Zea mays GRMZM2G127064 I 0.809
PGSC0003DMG401033880 Solanum tuberosum PGSC0003DMG401033880 N 0.809
F775_07376 Aegilops tauschii F775_07376 I 0.809
Carubv10017859m.g Capsella rubella Carubv10017859m.g I 0.809
TRIUR3_24602 Triticum urartu TRIUR3_24602 I 0.808
BRADI2G30695 Brachypodium distachyon BRADI2G30695 I 0.808
MDP0000460139 Malus domestica MDP0000460139 I 0.808
Gorai.004G134600 Gossypium raimondii Gorai.004G134600 I 0.808
MDP0000828055 Malus domestica MDP0000828055 I 0.808
Pavir.Bb02088 Panicum virgatum Pavir.Bb02088 I 0.808
Pavir.Eb03559 Panicum virgatum Pavir.Eb03559 I 0.808
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.808
MDP0000578301 Malus domestica MDP0000578301 I 0.808
Pavir.J31756 Panicum virgatum Pavir.J31756 I 0.808
Pavir.Ba02545 Panicum virgatum Pavir.Ba02545 I 0.808