PGSC0003DMG400031140 (Solanum tuberosum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 PGSC0003DMG400031140 T354301_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY51
M02568_2.00
Arabidopsis thaliana
NNRGTCAANN

NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7478
0.832 0.741
PK25870.1
M01325_2.00
Cannabis sativa
NRGTCAAM

KTTGACYN
PBM
Lambert et al.(2019)
pTH10156
0.821 0.707
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN

NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.819 0.603
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN

NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.815 0.638
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN

NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.815 0.638
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN

NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.809 0.569
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400079980 WRKY 151 208

Links

Other WRKY family TFs
Other Solanum tuberosum TFs

247 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc04g072070.2 Solanum lycopersicum Solyc04g072070.2 I 0.869
PGSC0003DMG400023196 Solanum tuberosum PGSC0003DMG400023196 I 0.864
Solyc12g056750.1 Solanum lycopersicum Solyc12g056750.1 I 0.863
PGSC0003DMG400033177 Solanum tuberosum PGSC0003DMG400033177 I 0.852
TCM_035897 Theobroma cacao TCM_035897 I 0.844
Gorai.010G131300 Gossypium raimondii Gorai.010G131300 I 0.842
VIT_04s0069g00980 Vitis vinifera VIT_04s0069g00980 I 0.842
GLYMA05G31800 Glycine max GLYMA05G31800 I 0.839
Ca_04141 Cicer arietinum Ca_04141 I 0.836
Bo9g018440 Brassica oleracea Bo9g018440 I 0.835
Bra037796 Brassica rapa Bra037796 I 0.834
MTR_3g095040 Medicago truncatula MTR_3g095040 I 0.833
Thhalv10004930m.g Eutrema salsugineum Thhalv10004930m.g I 0.833
WRKY51 Arabidopsis lyrata fgenesh2_kg.8__2513__AT5G64810.1 I 0.832
chr1.CM0032.340.nd Lotus japonicus chr1.CM0032.340.nd I 0.832
Pm001825 Prunus mume Pm001825 I 0.832
MTR_8g092010 Medicago truncatula MTR_8g092010 I 0.832
WRKY51 Arabidopsis thaliana AT5G64810 D 0.832
Gorai.009G259600 Gossypium raimondii Gorai.009G259600 I 0.831
Cagra.2438s0022 Capsella grandiflora Cagra.2438s0022 I 0.830
GLYMA08G15050 Glycine max GLYMA08G15050 I 0.830
Carubv10027178m.g Capsella rubella Carubv10027178m.g I 0.830
Bostr.0568s0314 Boechera stricta Bostr.0568s0314 I 0.830
Bo2g166420 Brassica oleracea Bo2g166420 I 0.829
Bra031900 Brassica rapa Bra031900 I 0.829
Cucsa.101530 Cucumis sativus Cucsa.101530 I 0.829
Bra024328 Brassica rapa Bra024328 I 0.828
Bo3g100860 Brassica oleracea Bo3g100860 I 0.828
Lus10035841.g Linum usitatissimum Lus10035841.g I 0.827
Lus10036624.g Linum usitatissimum Lus10036624.g I 0.827
Solyc04g051690.2 Solanum lycopersicum Solyc04g051690.2 I 0.826
POPTR_0005s08720 Populus trichocarpa POPTR_0005s08720 I 0.826
POPTR_0007s06720 Populus trichocarpa POPTR_0007s06720 I 0.826
GLYMA04G39650 Glycine max GLYMA04G39650 I 0.825
Eucgr.I00316 Eucalyptus grandis Eucgr.I00316 I 0.825
29771.m000072 Ricinus communis 29771.m000072 I 0.824
Cucsa.250350 Cucumis sativus Cucsa.250350 I 0.824
Gorai.007G245200 Gossypium raimondii Gorai.007G245200 I 0.824
Eucgr.I00317 Eucalyptus grandis Eucgr.I00317 I 0.823
VIT_07s0031g01710 Vitis vinifera VIT_07s0031g01710 I 0.823
SapurV1A.0318s0110 Salix purpurea SapurV1A.0318s0110 I 0.823
cassava14063.valid.m1 Manihot esculenta cassava14063.valid.m1 I 0.822
MTR_6g086555 Medicago truncatula MTR_6g086555 I 0.822
Lus10006848.g Linum usitatissimum Lus10006848.g I 0.822
cassava14062.valid.m1 Manihot esculenta cassava14062.valid.m1 I 0.822
GSMUA_Achr4G08880_001 Musa acuminata GSMUA_Achr4G08880_001 I 0.822
SapurV1A.0594s0120 Salix purpurea SapurV1A.0594s0120 I 0.821
PK25870.1 Cannabis sativa PK25870.1 D 0.821
OB01G37710 Oryza brachyantha OB01G37710 I 0.821
MDP0000480547 Malus domestica MDP0000480547 I 0.821
AMTR_s00078p00145410 Amborella trichopoda AMTR_s00078p00145410 I 0.821
PDK_20s1331611g001 Phoenix dactylifera PDK_20s1331611g001 I 0.821
orange1.1g029257m.g Citrus sinensis orange1.1g029257m.g I 0.821
Ciclev10026733m.g Citrus clementina Ciclev10026733m.g I 0.821
WRKY50 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6002222 I 0.821
PRUPE_ppa015480mg Prunus persica PRUPE_ppa015480mg I 0.821
Gorai.003G047800 Gossypium raimondii Gorai.003G047800 I 0.820
evm.TU.supercontig_919.2 Carica papaya evm.TU.supercontig_919.2 I 0.819
Solyc08g062490.2 Solanum lycopersicum Solyc08g062490.2 I 0.819
Sb03g032800 Sorghum bicolor Sb03g032800 I 0.818
TCM_001265 Theobroma cacao TCM_001265 I 0.818
MDP0000253189 Malus domestica MDP0000253189 I 0.818
GRMZM2G101405 Zea mays GRMZM2G101405 I 0.818
Gorai.011G114200 Gossypium raimondii Gorai.011G114200 I 0.817
GLYMA06G15220 Glycine max GLYMA06G15220 I 0.817
Bo2g155960 Brassica oleracea Bo2g155960 I 0.817
Traes_1DL_D550418641 Triticum aestivum Traes_1DL_D550418641 I 0.817
Bra020546 Brassica rapa Bra020546 I 0.817
TRAES3BF066700160CFD_g Triticum aestivum TRAES3BF066700160CFD_g I 0.817
ORUFI01G31840 Oryza rufipogon ORUFI01G31840 I 0.816
OBART01G28780 Oryza barthii OBART01G28780 I 0.816
OBART01G28750 Oryza barthii OBART01G28750 I 0.816
ORGLA01G0238400 Oryza glaberrima ORGLA01G0238400 I 0.816
OS01G0714800 Oryza sativa OS01G0714800 I 0.816
BGIOSGA000921 Oryza indica BGIOSGA000921 I 0.816
TRIUR3_33662 Triticum urartu TRIUR3_33662 I 0.816
PDK_20s1512971g002 Phoenix dactylifera PDK_20s1512971g002 I 0.816
OMERI01G26280 Oryza meridionalis OMERI01G26280 I 0.816
OGLUM01G32750 Oryza glumaepatula OGLUM01G32750 I 0.816
OPUNC01G28510 Oryza punctata OPUNC01G28510 I 0.816
SapurV1A.1151s0090 Salix purpurea SapurV1A.1151s0090 I 0.816
MLOC_81131 Hordeum vulgare MLOC_81131 I 0.816
MLOC_10264 Hordeum vulgare MLOC_10264 I 0.816
TRAES3BF111700140CFD_g Triticum aestivum TRAES3BF111700140CFD_g I 0.816
TRAES3BF267200010CFD_g Triticum aestivum TRAES3BF267200010CFD_g I 0.816
Traes_3DL_DF0D3F3FE Triticum aestivum Traes_3DL_DF0D3F3FE I 0.816
Pavir.J05732 Panicum virgatum Pavir.J05732 I 0.815
OPUNC05G21470 Oryza punctata OPUNC05G21470 I 0.815
TRIUR3_01979 Triticum urartu TRIUR3_01979 I 0.815
Pavir.J03284 Panicum virgatum Pavir.J03284 I 0.815
ORUFI05G25660 Oryza rufipogon ORUFI05G25660 I 0.815
OS05G0537100 Oryza sativa OS05G0537100 I 0.815
POPTR_0006s24050 Populus trichocarpa POPTR_0006s24050 I 0.815
Sb09g005700 Sorghum bicolor Sb09g005700 I 0.815
Sb09g026830 Sorghum bicolor Sb09g026830 I 0.815
chr1.CM0133.390.nc Lotus japonicus chr1.CM0133.390.nc I 0.815
Pavir.Ca01028 Panicum virgatum Pavir.Ca01028 I 0.815
Si023279m.g Setaria italica Si023279m.g I 0.815
Si023194m.g Setaria italica Si023194m.g I 0.815
Sb03g003360 Sorghum bicolor Sb03g003360 I 0.815
cassava21099.m1 Manihot esculenta cassava21099.m1 I 0.815
Pavir.Ca01747 Panicum virgatum Pavir.Ca01747 I 0.815
PGSC0003DMG401031196 Solanum tuberosum PGSC0003DMG401031196 I 0.815
GSMUA_Achr4G14990_001 Musa acuminata GSMUA_Achr4G14990_001 I 0.815
GRMZM5G863420 Zea mays GRMZM5G863420 I 0.815
OMERI01G26720 Oryza meridionalis OMERI01G26720 I 0.815
GRMZM2G137802 Zea mays GRMZM2G137802 I 0.815
LPERR01G05270 Leersia perrieri LPERR01G05270 I 0.815
OBART05G24090 Oryza barthii OBART05G24090 I 0.815
WRKY50 Arabidopsis thaliana AT5G26170 D 0.815
OB05G31630 Oryza brachyantha OB05G31630 I 0.815
LPERR05G19900 Leersia perrieri LPERR05G19900 I 0.815
LPERR05G04920 Leersia perrieri LPERR05G04920 I 0.815
GRMZM2G057116 Zea mays GRMZM2G057116 I 0.815
GRMZM2G163054 Zea mays GRMZM2G163054 I 0.815
ONIVA05G24830 Oryza nivara ONIVA05G24830 I 0.815
F775_52480 Aegilops tauschii F775_52480 I 0.815
GLYMA17G34210 Glycine max GLYMA17G34210 I 0.815
BGIOSGA020266 Oryza indica BGIOSGA020266 I 0.815
BRADI2G18530 Brachypodium distachyon BRADI2G18530 I 0.815
GLYMA10G31413 Glycine max GLYMA10G31413 I 0.815
LjSGA_012799.2 Lotus japonicus LjSGA_012799.2 I 0.814
BRADI2G48090 Brachypodium distachyon BRADI2G48090 I 0.814
LPERR01G24650 Leersia perrieri LPERR01G24650 I 0.814
GSMUA_Achr7G09680_001 Musa acuminata GSMUA_Achr7G09680_001 I 0.814
GSMUA_Achr4G02800_001 Musa acuminata GSMUA_Achr4G02800_001 I 0.814
Pavir.Ea02619 Panicum virgatum Pavir.Ea02619 I 0.814
Si004464m.g Setaria italica Si004464m.g I 0.814
Cla022318 Citrullus lanatus Cla022318 I 0.814
MDP0000121669 Malus domestica MDP0000121669 I 0.813
VIT_04s0008g01470 Vitis vinifera VIT_04s0008g01470 I 0.813
mgf026356m Mimulus guttatus mgf026356m I 0.813
Gorai.006G265200 Gossypium raimondii Gorai.006G265200 I 0.813
Gorai.012G040700 Gossypium raimondii Gorai.012G040700 I 0.813
Traes_1AL_9ADA7A031 Triticum aestivum Traes_1AL_9ADA7A031 I 0.813
Ca_09134 Cicer arietinum Ca_09134 I 0.813
cassava38697.m1 Manihot esculenta cassava38697.m1 I 0.812
GRMZM2G475984 Zea mays GRMZM2G475984 I 0.812
BGIOSGA002237 Oryza indica BGIOSGA002237 I 0.812
Si002621m.g Setaria italica Si002621m.g I 0.812
GRMZM2G516301 Zea mays GRMZM2G516301 I 0.812
Pm005548 Prunus mume Pm005548 I 0.812
OMERI01G05840 Oryza meridionalis OMERI01G05840 I 0.812
GSMUA_Achr3G31310_001 Musa acuminata GSMUA_Achr3G31310_001 I 0.812
chr2.CM0641.70.nc Lotus japonicus chr2.CM0641.70.nc I 0.812
OS01G0186000 Oryza sativa OS01G0186000 I 0.812
ONIVA01G06360 Oryza nivara ONIVA01G06360 I 0.812
BRADI2G05510 Brachypodium distachyon BRADI2G05510 I 0.812
Pavir.Ea00274 Panicum virgatum Pavir.Ea00274 I 0.812
OPUNC01G05450 Oryza punctata OPUNC01G05450 I 0.812
Pavir.J08526 Panicum virgatum Pavir.J08526 I 0.812
ORGLA01G0052400 Oryza glaberrima ORGLA01G0052400 I 0.812
F775_27801 Aegilops tauschii F775_27801 I 0.812
Eucgr.C00675 Eucalyptus grandis Eucgr.C00675 I 0.812
GLYMA04G05700 Glycine max GLYMA04G05700 I 0.812
ORUFI01G06050 Oryza rufipogon ORUFI01G06050 I 0.812
VIT_04s0069g00970 Vitis vinifera VIT_04s0069g00970 I 0.812
Aquca_014_00461 Aquilegia coerulea Aquca_014_00461 I 0.812
OGLUM01G06090 Oryza glumaepatula OGLUM01G06090 I 0.812
GSMUA_Achr7G25400_001 Musa acuminata GSMUA_Achr7G25400_001 I 0.812
MTR_1g015140 Medicago truncatula MTR_1g015140 I 0.812
Traes_1AS_1432A2F79 Triticum aestivum Traes_1AS_1432A2F79 I 0.811
TRIUR3_29978 Triticum urartu TRIUR3_29978 I 0.811
OMERI05G05240 Oryza meridionalis OMERI05G05240 I 0.811
OBART05G05560 Oryza barthii OBART05G05560 I 0.811
ORUFI05G05890 Oryza rufipogon ORUFI05G05890 I 0.811
OS05G0183100 Oryza sativa OS05G0183100 I 0.811
ORGLA05G0050000 Oryza glaberrima ORGLA05G0050000 I 0.811
OB05G15280 Oryza brachyantha OB05G15280 I 0.811
OPUNC05G05190 Oryza punctata OPUNC05G05190 I 0.811
BRADI2G33540 Brachypodium distachyon BRADI2G33540 I 0.811
ONIVA05G06030 Oryza nivara ONIVA05G06030 I 0.811
MLOC_12079 Hordeum vulgare MLOC_12079 I 0.811
BGIOSGA018676 Oryza indica BGIOSGA018676 I 0.811
PDK_20s1384091g002 Phoenix dactylifera PDK_20s1384091g002 I 0.811
OGLUM05G05440 Oryza glumaepatula OGLUM05G05440 I 0.811
Eucgr.K01219 Eucalyptus grandis Eucgr.K01219 I 0.810
Gorai.001G021500 Gossypium raimondii Gorai.001G021500 I 0.810
MLOC_54606 Hordeum vulgare MLOC_54606 I 0.810
Thhalv10025806m.g Eutrema salsugineum Thhalv10025806m.g I 0.810
Ca_15251 Cicer arietinum Ca_15251 I 0.810
Ciclev10032012m.g Citrus clementina Ciclev10032012m.g I 0.810
Ca_01018 Cicer arietinum Ca_01018 I 0.810
F775_19446 Aegilops tauschii F775_19446 I 0.810
GSMUA_Achr6G22160_001 Musa acuminata GSMUA_Achr6G22160_001 I 0.810
MTR_5g091390 Medicago truncatula MTR_5g091390 I 0.810
orange1.1g019375m.g Citrus sinensis orange1.1g019375m.g I 0.810
MTR_3g104750 Medicago truncatula MTR_3g104750 I 0.810
Carubv10002099m.g Capsella rubella Carubv10002099m.g I 0.810
AMTR_s00003p00229970 Amborella trichopoda AMTR_s00003p00229970 I 0.810
gene22024-v1.0-hybrid Fragaria vesca gene22024-v1.0-hybrid I 0.810
TCM_037343 Theobroma cacao TCM_037343 I 0.810
Cagra.0998s0013 Capsella grandiflora Cagra.0998s0013 I 0.810
29739.m003586 Ricinus communis 29739.m003586 I 0.809
BGIOSGA001069 Oryza indica BGIOSGA001069 I 0.809
BRADI2G45900 Brachypodium distachyon BRADI2G45900 I 0.809
LPERR01G21930 Leersia perrieri LPERR01G21930 I 0.809
OMERI01G23360 Oryza meridionalis OMERI01G23360 I 0.809
GSMUA_Achr3G20450_001 Musa acuminata GSMUA_Achr3G20450_001 I 0.809
ORGLA01G0210100 Oryza glaberrima ORGLA01G0210100 I 0.809
TRAES3BF058500060CFD_g Triticum aestivum TRAES3BF058500060CFD_g I 0.809
GRMZM5G812272 Zea mays GRMZM5G812272 I 0.809
Bra009885 Brassica rapa Bra009885 I 0.809
Si001816m.g Setaria italica Si001816m.g I 0.809
Pavir.J35195 Panicum virgatum Pavir.J35195 I 0.809
Pavir.Eb02766 Panicum virgatum Pavir.Eb02766 I 0.809
Pavir.Eb02690 Panicum virgatum Pavir.Eb02690 I 0.809
WRKY71 Arabidopsis thaliana AT1G29860 D 0.809
OB01G34880 Oryza brachyantha OB01G34880 I 0.809
Bo7g044930 Brassica oleracea Bo7g044930 I 0.809
GSMUA_Achr8G26240_001 Musa acuminata GSMUA_Achr8G26240_001 I 0.809
OBART01G25690 Oryza barthii OBART01G25690 I 0.809
GLYMA14G11440 Glycine max GLYMA14G11440 I 0.809
Bostr.29827s0201 Boechera stricta Bostr.29827s0201 I 0.809
Sb03g026170 Sorghum bicolor Sb03g026170 I 0.809
Cagra.5647s0024 Capsella grandiflora Cagra.5647s0024 I 0.809
PK29640.1 Cannabis sativa PK29640.1 I 0.809
Sb03g030480 Sorghum bicolor Sb03g030480 I 0.809
OGLUM01G29520 Oryza glumaepatula OGLUM01G29520 I 0.809
Carubv10009934m.g Capsella rubella Carubv10009934m.g I 0.809
ONIVA01G28940 Oryza nivara ONIVA01G28940 I 0.809
ORUFI01G28580 Oryza rufipogon ORUFI01G28580 I 0.809
WRKY71 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002413 I 0.809
OPUNC01G25580 Oryza punctata OPUNC01G25580 I 0.809
Bo9g011080 Brassica oleracea Bo9g011080 I 0.809
F775_52681 Aegilops tauschii F775_52681 I 0.809
Bostr.15697s0281 Boechera stricta Bostr.15697s0281 I 0.809
GRMZM2G151763 Zea mays GRMZM2G151763 I 0.809
Thhalv10009672m.g Eutrema salsugineum Thhalv10009672m.g I 0.808
Bo8g101460 Brassica oleracea Bo8g101460 I 0.808
SapurV1A.0354s0060 Salix purpurea SapurV1A.0354s0060 I 0.808
29889.m003321 Ricinus communis 29889.m003321 I 0.808
Cla005606 Citrullus lanatus Cla005606 I 0.808
GSMUA_Achr1G04770_001 Musa acuminata GSMUA_Achr1G04770_001 I 0.808
TCM_001885 Theobroma cacao TCM_001885 I 0.808
Solyc02g071130.2 Solanum lycopersicum Solyc02g071130.2 I 0.808
PGSC0003DMG400009703 Solanum tuberosum PGSC0003DMG400009703 I 0.808
POPTR_0002s06000 Populus trichocarpa POPTR_0002s06000 I 0.808
Cucsa.239590 Cucumis sativus Cucsa.239590 I 0.808
Carubv10026463m.g Capsella rubella Carubv10026463m.g I 0.808
orange1.1g031482m.g Citrus sinensis orange1.1g031482m.g I 0.808
Bra031221 Brassica rapa Bra031221 I 0.808
GLYMA02G45530 Glycine max GLYMA02G45530 I 0.808
Gorai.006G008200 Gossypium raimondii Gorai.006G008200 I 0.808
Ciclev10009761m.g Citrus clementina Ciclev10009761m.g I 0.808
GLYMA14G03280 Glycine max GLYMA14G03280 I 0.808
Bra030178 Brassica rapa Bra030178 I 0.808