PGSC0003DMG400031140 (Solanum tuberosum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 PGSC0003DMG400031140 T354301_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY51
M02568_2.00
Arabidopsis thaliana
NNRGTCAANN

NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7478
0.832 0.741
PK25870.1
M01325_2.00
Cannabis sativa
NRGTCAAM

KTTGACYN
PBM
Lambert et al.(2019)
pTH10156
0.821 0.707
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN

NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.819 0.603
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN

NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.815 0.638
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN

NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.815 0.638
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN

NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.809 0.569
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400079980 WRKY 151 208

Links

Other WRKY family TFs
Other Solanum tuberosum TFs

247 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29738.m001041 Ricinus communis 29738.m001041 I 0.000
30167.m000856 Ricinus communis 30167.m000856 I 0.000
30174.m008721 Ricinus communis 30174.m008721 I 0.000
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.000
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.000
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.000
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.000
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.000
Bo2g055640 Brassica oleracea Bo2g055640 I 0.000
Bo2g061250 Brassica oleracea Bo2g061250 I 0.000
Bo6g099040 Brassica oleracea Bo6g099040 I 0.000
Bo6g103670 Brassica oleracea Bo6g103670 I 0.000
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.000
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.000
Bra004097 Brassica rapa Bra004097 I 0.000
Bra004212 Brassica rapa Bra004212 I 0.000
Bra034010 Brassica rapa Bra034010 I 0.000
Bra038350 Brassica rapa Bra038350 I 0.000
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.000
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.000
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.000
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.000
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.000
BRC2 Arabidopsis thaliana AT1G68800 I 0.000
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.000
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.000
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.000
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.000
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.000
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.000
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.000
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.000
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.000
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.000
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.000
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.000
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.000
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.000
Cla002355 Citrullus lanatus Cla002355 I 0.000
Cla007227 Citrullus lanatus Cla007227 I 0.000
Cla016709 Citrullus lanatus Cla016709 I 0.000
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.000
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.000
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.000
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.000
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.000
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.000
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.000
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.000
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.000
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.000
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.000
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.000
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.000
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.000
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.000
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.000
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.000
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.000
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.000
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.000
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.000
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.000
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.000
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.000
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.000
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.000
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.000
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.000
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.000
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I 0.000
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.000
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.000
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.000
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.000
Lus10003078.g Linum usitatissimum Lus10003078.g I 0.000
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.000
Lus10034072.g Linum usitatissimum Lus10034072.g I 0.000
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.000
MDP0000173048 Malus domestica MDP0000173048 I 0.000
MDP0000272980 Malus domestica MDP0000272980 I 0.000
mgf019480m Mimulus guttatus mgf019480m I 0.000
mgf022233m Mimulus guttatus mgf022233m I 0.000
mgf024687m Mimulus guttatus mgf024687m I 0.000
mgf026636m Mimulus guttatus mgf026636m I 0.000
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.000
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.000
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.000
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.000
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.000
OBART09G10040 Oryza barthii OBART09G10040 I 0.000
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.000
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.000
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.000
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.000
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.000
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.000
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.000
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.000
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.000
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.000
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.000
OS09G0410500 Oryza sativa OS09G0410500 I 0.000
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.000
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.000
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.000
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.000
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.000
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.000
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.000
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.000
PK12240.1 Cannabis sativa PK12240.1 D 0.000
PK19717.1 Cannabis sativa PK19717.1 D 0.000
Pm015499 Prunus mume Pm015499 I 0.000
Pm029002 Prunus mume Pm029002 I 0.000
Pm030202 Prunus mume Pm030202 I 0.000
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.000
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.000
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.000
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.000
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.000
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.000
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.000
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.000
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.000
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.000
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.000
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.000
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.000
Si015230m.g Setaria italica Si015230m.g I 0.000
Si033183m.g Setaria italica Si033183m.g I 0.000
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.000
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.000
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.000
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.000
TB1 Oryza sativa OS03G0706500 D 0.000
TCM_011874 Theobroma cacao TCM_011874 I 0.000
TCM_012252 Theobroma cacao TCM_012252 I 0.000
TCM_019518 Theobroma cacao TCM_019518 I 0.000
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.000
TCP1 Arabidopsis thaliana AT1G67260 D 0.000
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.000
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.000
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.000
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.000
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.000
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.000
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.000