POPTR_0002s22180 (Populus trichocarpa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 POPTR_0002s22180 T354348_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZAP1
M02726_2.00
Arabidopsis thaliana
DRCKCGGTCAA

TTGACCGMGYH
SELEX
Mathelier et al.(2014)
MA0589.1
0.864 0.774
ZAP1
M11463_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_01
0.864 0.774
WRKY20
M07414_2.00
Arabidopsis thaliana
HHHRGTCAAMGNH

DNCKTTGACYDDD
Dap-seq
OMalley et al.(2016)
WRKY20_col_a
0.855 0.739
WRKY2
M02567_2.00
Arabidopsis thaliana
BRGTCAAM

KTTGACYV
PBM
Weirauch et al.(2014)
pTH8832
0.854 0.704
WRKY3
M07381_2.00
Arabidopsis thaliana
MAWAGTCAAMR

YKTTGACTWTK
Dap-seq
OMalley et al.(2016)
WRKY3_col_a
0.854 0.678
Q40090_IPOBA
M11466_2.00
Ipomoea batatas Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPF1_Q2
0.847 0.696
PK05432.1
M01324_2.00
Cannabis sativa
NNRGTCARH

DYTGACYNN
PBM
Lambert et al.(2019)
pTH11342
0.841 0.678
WRKY33
M02554_2.00
Arabidopsis thaliana
NNRGTCHDNN

NNHDGACYNN
PBM
Weirauch et al.(2014)
pTH8183
0.840 0.678
WRKY33
M07391_2.00
Arabidopsis thaliana
HWWAGTCAAMD

HKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY33_col_a
0.840 0.678
WRKY26
M07418_2.00
Arabidopsis thaliana
MWAAGTCAACGNH

DNCGTTGACTWWK
Dap-seq
OMalley et al.(2016)
WRKY26_col_a
0.839 0.670
WRKY26
M07419_2.00
Arabidopsis thaliana
HMWAGTCAAMR

YKTTGACTWKD
Dap-seq
OMalley et al.(2016)
WRKY26_colamp_a
0.839 0.670
WRKY25
M02552_2.00
Arabidopsis thaliana
YRGTCAAM

KTTGACYR
PBM
Weirauch et al.(2014)
pTH8810
0.829 0.609
WRKY25
M07387_2.00
Arabidopsis thaliana
HWWRGTCAAMR

YKTTGACYWWD
Dap-seq
OMalley et al.(2016)
WRKY25_col_a
0.829 0.609
WRKY25
M07388_2.00
Arabidopsis thaliana
NNNHWRGTCAACRNH

DNYGTTGACYWDNNN
Dap-seq
OMalley et al.(2016)
WRKY25_colamp_a
0.829 0.609
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s22180.1 WRKY 104 160
POPTR_0002s22180.1 WRKY 219 276

Links

Other WRKY family TFs
Other Populus trichocarpa TFs

775 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.7867s0394 Boechera stricta Bostr.7867s0394 N 0.000
Bostr.19424s0811 Boechera stricta Bostr.19424s0811 N 0.000
Bostr.13404s0068 Boechera stricta Bostr.13404s0068 N 0.000
Bostr.12302s0059 Boechera stricta Bostr.12302s0059 N 0.000
Bo6g017000 Brassica oleracea Bo6g017000 N 0.000
Bo5g117160 Brassica oleracea Bo5g117160 N 0.000
Bo5g111170 Brassica oleracea Bo5g111170 N 0.000
Bo5g075210 Brassica oleracea Bo5g075210 N 0.000
Bo5g041280 Brassica oleracea Bo5g041280 N 0.000
Bo5g034250 Brassica oleracea Bo5g034250 N 0.000
Bo4g173170 Brassica oleracea Bo4g173170 N 0.000
Bo4g161430 Brassica oleracea Bo4g161430 N 0.000
Bo6g087610 Brassica oleracea Bo6g087610 N 0.000
Bo7g016140 Brassica oleracea Bo7g016140 N 0.000
Bo7g043390 Brassica oleracea Bo7g043390 N 0.000
Bo9g181220 Brassica oleracea Bo9g181220 N 0.000
Bo9g163500 Brassica oleracea Bo9g163500 N 0.000
Bo9g140760 Brassica oleracea Bo9g140760 N 0.000
Bo8g066500 Brassica oleracea Bo8g066500 N 0.000
Bo8g007060 Brassica oleracea Bo8g007060 N 0.000
Bo7g101500 Brassica oleracea Bo7g101500 N 0.000
Bo7g067460 Brassica oleracea Bo7g067460 N 0.000
Bo7g065570 Brassica oleracea Bo7g065570 N 0.000
Bo4g154600 Brassica oleracea Bo4g154600 N 0.000
Bo4g096780 Brassica oleracea Bo4g096780 N 0.000
Bo1g053550 Brassica oleracea Bo1g053550 N 0.000
Bo1g028470 Brassica oleracea Bo1g028470 N 0.000
Bo1g017840 Brassica oleracea Bo1g017840 N 0.000
Bo09855s010 Brassica oleracea Bo09855s010 N 0.000
Bo08089s010 Brassica oleracea Bo08089s010 N 0.000
Bo04405s010 Brassica oleracea Bo04405s010 N 0.000
Bo01294s010 Brassica oleracea Bo01294s010 N 0.000
Bo01167s020 Brassica oleracea Bo01167s020 N 0.000
Bo01093s010 Brassica oleracea Bo01093s010 N 0.000
Bo01073s040 Brassica oleracea Bo01073s040 N 0.000
Bo1g101740 Brassica oleracea Bo1g101740 N 0.000
Bo2g050430 Brassica oleracea Bo2g050430 N 0.000
Bo4g052050 Brassica oleracea Bo4g052050 N 0.000
Bo4g009340 Brassica oleracea Bo4g009340 N 0.000
Bo3g169160 Brassica oleracea Bo3g169160 N 0.000
Bo3g113790 Brassica oleracea Bo3g113790 N 0.000
Bo3g107290 Brassica oleracea Bo3g107290 N 0.000
Bo3g091380 Brassica oleracea Bo3g091380 N 0.000
Bo3g078620 Brassica oleracea Bo3g078620 N 0.000
Bo3g061460 Brassica oleracea Bo3g061460 N 0.000
Bo2g134150 Brassica oleracea Bo2g134150 N 0.000
Bo2g100490 Brassica oleracea Bo2g100490 N 0.000
Bo00576s150 Brassica oleracea Bo00576s150 N 0.000