POPTR_0013s10780 (Populus trichocarpa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 POPTR_0013s10780 T354395_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY14
M00731_2.00 		Arabidopsis thaliana
NRGTCAAMNN
NNKTTGACYN		 PBM
Chang et al.(2013)
pTH7570 		0.819 0.791
WRKY14
M07375_2.00 		Arabidopsis thaliana
NAAAGTCAACGNN
NNCGTTGACTTTN		 Dap-seq
OMalley et al.(2016)
WRKY14_col_a 		0.819 0.791
WRKY14
M07376_2.00 		Arabidopsis thaliana
NAAAGTCAACGNH
DNCGTTGACTTTN		 Dap-seq
OMalley et al.(2016)
WRKY14_colamp_a 		0.819 0.791
WRKY27
M02566_2.00 		Arabidopsis thaliana
NNGTCHDNN
NNHDGACNN		 PBM
Weirauch et al.(2014)
pTH8188 		0.816 0.628
WRKY27
M07430_2.00 		Arabidopsis thaliana
MAAAGTCAACKNH
DNMGTTGACTTTK		 Dap-seq
OMalley et al.(2016)
WRKY27_col_a 		0.816 0.628
WRKY27
M07431_2.00 		Arabidopsis thaliana
HAAAGTCAACKNH
DNMGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY27_colamp_a 		0.816 0.628
WRKY65
M07372_2.00 		Arabidopsis thaliana
NWWAGTCAACG
CGTTGACTWWN		 Dap-seq
OMalley et al.(2016)
WRKY65_col_a 		0.809 0.721
WRKY65
M07373_2.00 		Arabidopsis thaliana
NAAAGTCAACGN
NCGTTGACTTTN		 Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a 		0.809 0.721
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0013s10780.1 WRKY 5 48

Links

Other WRKY family TFs
Other Populus trichocarpa TFs

221 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000566005 Malus domestica MDP0000566005 I 0.819
Bo5g063280 Brassica oleracea Bo5g063280 I 0.819
Bra041029 Brassica rapa Bra041029 I 0.819
WRKY14 Arabidopsis lyrata scaffold_103413.1 I 0.819
Thhalv10007691m.g Eutrema salsugineum Thhalv10007691m.g I 0.819
WRKY14 Arabidopsis thaliana AT1G30650 D 0.819
Bostr.15697s0365 Boechera stricta Bostr.15697s0365 I 0.819
Carubv10009191m.g Capsella rubella Carubv10009191m.g I 0.819
Cagra.1508s0138 Capsella grandiflora Cagra.1508s0138 I 0.819
Bra022612 Brassica rapa Bra022612 I 0.816
Cagra.0084s0027 Capsella grandiflora Cagra.0084s0027 I 0.816
WRKY27 Arabidopsis lyrata fgenesh2_kg.8__1163__AT5G52830.1 I 0.816
Eucgr.A02718 Eucalyptus grandis Eucgr.A02718 I 0.816
cassava7246.valid.m1 Manihot esculenta cassava7246.valid.m1 I 0.816
Bostr.7305s0070 Boechera stricta Bostr.7305s0070 I 0.816
Carubv10026599m.g Capsella rubella Carubv10026599m.g I 0.816
PGSC0003DMG400028469 Solanum tuberosum PGSC0003DMG400028469 I 0.816
Thhalv10013872m.g Eutrema salsugineum Thhalv10013872m.g I 0.816
Solyc02g072190.2 Solanum lycopersicum Solyc02g072190.2 I 0.816
Bo2g047450 Brassica oleracea Bo2g047450 I 0.816
WRKY27 Arabidopsis thaliana AT5G52830 D 0.816
ONIVA04G22850 Oryza nivara ONIVA04G22850 I 0.815
ONIVA02G31730 Oryza nivara ONIVA02G31730 I 0.815
TCM_026992 Theobroma cacao TCM_026992 I 0.815
VIT_10s0003g05740 Vitis vinifera VIT_10s0003g05740 I 0.815
mgf019715m Mimulus guttatus mgf019715m I 0.815
Aquca_030_00369 Aquilegia coerulea Aquca_030_00369 I 0.815
OPUNC02G26570 Oryza punctata OPUNC02G26570 I 0.815
OMERI04G19680 Oryza meridionalis OMERI04G19680 I 0.815
OPUNC04G21350 Oryza punctata OPUNC04G21350 I 0.815
OPUNC03G38520 Oryza punctata OPUNC03G38520 I 0.815
OMERI02G27980 Oryza meridionalis OMERI02G27980 I 0.815
OGLUM02G29590 Oryza glumaepatula OGLUM02G29590 I 0.815
Traes_5BL_B9DD3E76F Triticum aestivum Traes_5BL_B9DD3E76F I 0.815
Traes_5DL_E4A6D1889 Triticum aestivum Traes_5DL_E4A6D1889 I 0.815
OBART04G23800 Oryza barthii OBART04G23800 I 0.815
Traes_6AL_A5FB7CFA5 Triticum aestivum Traes_6AL_A5FB7CFA5 I 0.815
OGLUM03G41320 Oryza glumaepatula OGLUM03G41320 I 0.815
OGLUM04G23760 Oryza glumaepatula OGLUM04G23760 I 0.815
Bostr.23794s0620 Boechera stricta Bostr.23794s0620 I 0.815
ORGLA02G0248500 Oryza glaberrima ORGLA02G0248500 I 0.815
OLONG_013338 Oryza longistaminata OLONG_013338 I 0.815
Traes_6DL_D4F2CDDDC Triticum aestivum Traes_6DL_D4F2CDDDC I 0.815
OLONG_003240 Oryza longistaminata OLONG_003240 I 0.815
TRIUR3_25300 Triticum urartu TRIUR3_25300 I 0.815
Cucsa.048520 Cucumis sativus Cucsa.048520 I 0.815
Si038727m.g Setaria italica Si038727m.g I 0.815
27996.m000145 Ricinus communis 27996.m000145 I 0.815
cassava27495.m1 Manihot esculenta cassava27495.m1 I 0.815
PRUPE_ppa004535mg Prunus persica PRUPE_ppa004535mg I 0.815
Solyc02g021680.2 Solanum lycopersicum Solyc02g021680.2 I 0.815
Sb01g000696 Sorghum bicolor Sb01g000696 I 0.815
Sb04g030930 Sorghum bicolor Sb04g030930 I 0.815
Ca_08049 Cicer arietinum Ca_08049 I 0.815
Cla010016 Citrullus lanatus Cla010016 I 0.815
Si017095m.g Setaria italica Si017095m.g I 0.815
Sb06g027290 Sorghum bicolor Sb06g027290 I 0.815
Al_scaffold_0008_399 Arabidopsis lyrata Al_scaffold_0008_399 I 0.815
POPTR_0011s16050 Populus trichocarpa POPTR_0011s16050 I 0.815
ORUFI04G25540 Oryza rufipogon ORUFI04G25540 I 0.815
ORUFI02G30560 Oryza rufipogon ORUFI02G30560 I 0.815
Si011735m.g Setaria italica Si011735m.g I 0.815
ORGLA04G0203800 Oryza glaberrima ORGLA04G0203800 I 0.815
OS02G0698800 Oryza sativa OS02G0698800 I 0.815
OS04G0597300 Oryza sativa OS04G0597300 I 0.815
cassava46743.m1 Manihot esculenta cassava46743.m1 I 0.815
POPTR_0001s46490 Populus trichocarpa POPTR_0001s46490 I 0.815
OBART03G41470 Oryza barthii OBART03G41470 I 0.815
PGSC0003DMG400015104 Solanum tuberosum PGSC0003DMG400015104 I 0.815
ORGLA03G0383600 Oryza glaberrima ORGLA03G0383600 I 0.815
OB02G36150 Oryza brachyantha OB02G36150 I 0.815
BRADI3G52420 Brachypodium distachyon BRADI3G52420 I 0.815
Pavir.Ab02810 Panicum virgatum Pavir.Ab02810 I 0.815
Pavir.Ga00745 Panicum virgatum Pavir.Ga00745 I 0.815
Pavir.Gb00758 Panicum virgatum Pavir.Gb00758 I 0.815
Bra026228 Brassica rapa Bra026228 I 0.815
F775_18241 Aegilops tauschii F775_18241 I 0.815
orange1.1g012605m.g Citrus sinensis orange1.1g012605m.g I 0.815
GLYMA08G08340 Glycine max GLYMA08G08340 I 0.815
Lus10038426.g Linum usitatissimum Lus10038426.g I 0.815
GLYMA05G25331 Glycine max GLYMA05G25331 I 0.815
OBART02G29000 Oryza barthii OBART02G29000 I 0.815
Bra021934 Brassica rapa Bra021934 I 0.815
SapurV1A.0602s0100 Salix purpurea SapurV1A.0602s0100 I 0.815
WRKY35 Arabidopsis thaliana AT2G34830 I 0.815
PK06890.1 Cannabis sativa PK06890.1 I 0.815
chr6.LjT36O06.140.nd Lotus japonicus chr6.LjT36O06.140.nd I 0.815
AMTR_s00032p00016380 Amborella trichopoda AMTR_s00032p00016380 I 0.815
BGIOSGA008866 Oryza indica BGIOSGA008866 I 0.815
BGIOSGA017037 Oryza indica BGIOSGA017037 I 0.815
Bra005388 Brassica rapa Bra005388 I 0.815
Bo7g043420 Brassica oleracea Bo7g043420 I 0.815
Bo4g182940 Brassica oleracea Bo4g182940 I 0.815
Bo4g039260 Brassica oleracea Bo4g039260 I 0.815
GLYMA09G03451 Glycine max GLYMA09G03451 I 0.815
WRKY35 Arabidopsis lyrata fgenesh2_kg.4__1506__AT2G34830.1 I 0.815
GLYMA15G14371 Glycine max GLYMA15G14371 I 0.815
Ciclev10014984m.g Citrus clementina Ciclev10014984m.g I 0.815
Traes_6BL_EEAA2A7E3 Triticum aestivum Traes_6BL_EEAA2A7E3 I 0.815
Eucgr.K01971 Eucalyptus grandis Eucgr.K01971 I 0.815
MLOC_64446 Hordeum vulgare MLOC_64446 I 0.815
MTR_2g032030 Medicago truncatula MTR_2g032030 I 0.815
LPERR02G23560 Leersia perrieri LPERR02G23560 I 0.815
MLOC_58349 Hordeum vulgare MLOC_58349 I 0.815
Carubv10023228m.g Capsella rubella Carubv10023228m.g I 0.815
LPERR04G19510 Leersia perrieri LPERR04G19510 I 0.815
LPERR03G35420 Leersia perrieri LPERR03G35420 I 0.815
OB03G48510 Oryza brachyantha OB03G48510 I 0.815
evm.TU.supercontig_2011.1 Carica papaya evm.TU.supercontig_2011.1 I 0.815
Gorai.011G006600 Gossypium raimondii Gorai.011G006600 I 0.815
OB04G30700 Oryza brachyantha OB04G30700 I 0.815
GRMZM5G823157 Zea mays GRMZM5G823157 I 0.815
Gorai.009G116800 Gossypium raimondii Gorai.009G116800 I 0.815
GRMZM2G083717 Zea mays GRMZM2G083717 I 0.815
GRMZM2G138683 Zea mays GRMZM2G138683 I 0.815
GRMZM2G024898 Zea mays GRMZM2G024898 I 0.815
gene20152-v1.0-hybrid Fragaria vesca gene20152-v1.0-hybrid I 0.815
WRKY16 Arabidopsis thaliana AT5G45050 I 0.814
ORUFI03G43260 Oryza rufipogon ORUFI03G43260 I 0.814
Thhalv10016714m.g Eutrema salsugineum Thhalv10016714m.g I 0.814
BGIOSGA013972 Oryza indica BGIOSGA013972 I 0.814
ONIVA03G43980 Oryza nivara ONIVA03G43980 I 0.814
Al_scaffold_0008_414 Arabidopsis lyrata Al_scaffold_0008_414 I 0.814
OS03G0855100 Oryza sativa OS03G0855100 I 0.814
evm.TU.supercontig_107.128 Carica papaya evm.TU.supercontig_107.128 I 0.813
30026.m001461 Ricinus communis 30026.m001461 I 0.812
cassava34526.m1 Manihot esculenta cassava34526.m1 I 0.812
cassava39274.m1 Manihot esculenta cassava39274.m1 I 0.812
orange1.1g015616m.g Citrus sinensis orange1.1g015616m.g I 0.812
30169.m006581 Ricinus communis 30169.m006581 I 0.812
Ciclev10005095m.g Citrus clementina Ciclev10005095m.g I 0.812
SapurV1A.0985s0010 Salix purpurea SapurV1A.0985s0010 I 0.812
SapurV1A.0691s0140 Salix purpurea SapurV1A.0691s0140 I 0.812
SapurV1A.1480s0020 Salix purpurea SapurV1A.1480s0020 I 0.812
POPTR_0017s00960 Populus trichocarpa POPTR_0017s00960 I 0.812
TCM_046204 Theobroma cacao TCM_046204 I 0.812
PRUPE_ppa009647mg Prunus persica PRUPE_ppa009647mg I 0.812
POPTR_0004s07050 Populus trichocarpa POPTR_0004s07050 I 0.812
GSMUA_Achr4G27420_001 Musa acuminata GSMUA_Achr4G27420_001 I 0.811
Gorai.009G160800 Gossypium raimondii Gorai.009G160800 I 0.811
GSMUA_Achr11G06260_001 Musa acuminata GSMUA_Achr11G06260_001 I 0.811
Traes_1BL_794E99FF5 Triticum aestivum Traes_1BL_794E99FF5 I 0.811
Cucsa.167500 Cucumis sativus Cucsa.167500 I 0.811
MLOC_71477 Hordeum vulgare MLOC_71477 I 0.811
Gorai.010G161000 Gossypium raimondii Gorai.010G161000 I 0.811
Ciclev10016229m.g Citrus clementina Ciclev10016229m.g I 0.811
Lus10039295.g Linum usitatissimum Lus10039295.g I 0.811
SapurV1A.0181s0110 Salix purpurea SapurV1A.0181s0110 I 0.811
SapurV1A.3189s0010 Salix purpurea SapurV1A.3189s0010 I 0.811
SapurV1A.3459s0010 Salix purpurea SapurV1A.3459s0010 I 0.811
AMTR_s00053p00025460 Amborella trichopoda AMTR_s00053p00025460 I 0.811
BRADI3G34567 Brachypodium distachyon BRADI3G34567 I 0.811
orange1.1g022353m.g Citrus sinensis orange1.1g022353m.g I 0.811
POPTR_0004s05920 Populus trichocarpa POPTR_0004s05920 I 0.811
MDP0000133918 Malus domestica MDP0000133918 I 0.811
MDP0000168871 Malus domestica MDP0000168871 I 0.811
Lus10027538.g Linum usitatissimum Lus10027538.g I 0.811
GSMUA_Achr8G14610_001 Musa acuminata GSMUA_Achr8G14610_001 I 0.811
Traes_1AL_4E924201A Triticum aestivum Traes_1AL_4E924201A I 0.811
cassava24801.valid.m1 Manihot esculenta cassava24801.valid.m1 I 0.811
Cla020059 Citrullus lanatus Cla020059 I 0.811
POPTR_0011s06990 Populus trichocarpa POPTR_0011s06990 I 0.811
WRKY69 Vitis vinifera VIT_10s0003g01600 I 0.811
TRIUR3_03769 Triticum urartu TRIUR3_03769 I 0.811
evm.TU.supercontig_7.92 Carica papaya evm.TU.supercontig_7.92 I 0.810
Bra010839 Brassica rapa Bra010839 I 0.810
AMTR_s00130p00044000 Amborella trichopoda AMTR_s00130p00044000 I 0.810
gene29704-v1.0-hybrid Fragaria vesca gene29704-v1.0-hybrid I 0.810
GSMUA_Achr7G14300_001 Musa acuminata GSMUA_Achr7G14300_001 I 0.810
OS01G0750100 Oryza sativa OS01G0750100 I 0.810
SELMODRAFT_129832 Selaginella moellendorffii SELMODRAFT_129832 I 0.810
SELMODRAFT_77979 Selaginella moellendorffii SELMODRAFT_77979 I 0.810
ORUFI01G34080 Oryza rufipogon ORUFI01G34080 I 0.810
F775_16982 Aegilops tauschii F775_16982 I 0.810
BRADI5G20290 Brachypodium distachyon BRADI5G20290 I 0.810
mgf007569m Mimulus guttatus mgf007569m I 0.810
Eucgr.E02783 Eucalyptus grandis Eucgr.E02783 I 0.810
ONIVA01G35310 Oryza nivara ONIVA01G35310 I 0.810
BGIOSGA000826 Oryza indica BGIOSGA000826 I 0.810
OBART01G30930 Oryza barthii OBART01G30930 I 0.810
OGLUM01G35080 Oryza glumaepatula OGLUM01G35080 I 0.810
OMERI01G28060 Oryza meridionalis OMERI01G28060 I 0.810
OLONG_007204 Oryza longistaminata OLONG_007204 I 0.810
OB01G39870 Oryza brachyantha OB01G39870 I 0.810
LPERR01G26540 Leersia perrieri LPERR01G26540 I 0.810
ORGLA01G0253700 Oryza glaberrima ORGLA01G0253700 I 0.810
Bo3g143900 Brassica oleracea Bo3g143900 I 0.810
OPUNC01G29980 Oryza punctata OPUNC01G29980 I 0.810
MDP0000909869 Malus domestica MDP0000909869 I 0.809
WRKY65 Arabidopsis thaliana AT1G29280 D 0.809
WRKY65 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002596 I 0.809
Bra032300 Brassica rapa Bra032300 I 0.809
Bo5g058590 Brassica oleracea Bo5g058590 I 0.809
Bo4g108250 Brassica oleracea Bo4g108250 I 0.809
Bra014556 Brassica rapa Bra014556 I 0.809
MDP0000602139 Malus domestica MDP0000602139 I 0.809
Pavir.Eb03138 Panicum virgatum Pavir.Eb03138 I 0.809
Pavir.Ea02735 Panicum virgatum Pavir.Ea02735 I 0.809
GSMUA_Achr10G22020_001 Musa acuminata GSMUA_Achr10G22020_001 I 0.809
Gorai.007G013300 Gossypium raimondii Gorai.007G013300 I 0.809
Carubv10010013m.g Capsella rubella Carubv10010013m.g I 0.809
GLYMA05G37390 Glycine max GLYMA05G37390 I 0.809
GSMUA_Achr8G19810_001 Musa acuminata GSMUA_Achr8G19810_001 I 0.809
GSMUA_Achr5G09430_001 Musa acuminata GSMUA_Achr5G09430_001 I 0.809
PRUPE_ppa007745mg Prunus persica PRUPE_ppa007745mg I 0.809
Gorai.008G273700 Gossypium raimondii Gorai.008G273700 I 0.809
Cagra.3517s0048 Capsella grandiflora Cagra.3517s0048 I 0.809
cassava46742.m1 Manihot esculenta cassava46742.m1 I 0.809
GLYMA08G02160 Glycine max GLYMA08G02160 I 0.809
Aquca_013_00193 Aquilegia coerulea Aquca_013_00193 I 0.809
Bostr.15697s0224 Boechera stricta Bostr.15697s0224 I 0.809
Pm018219 Prunus mume Pm018219 I 0.809
GSMUA_Achr7G24840_001 Musa acuminata GSMUA_Achr7G24840_001 I 0.808
Ca_03206 Cicer arietinum Ca_03206 I 0.808
GSMUA_Achr10G14710_001 Musa acuminata GSMUA_Achr10G14710_001 I 0.808
Pm014006 Prunus mume Pm014006 I 0.808
Ca_06984 Cicer arietinum Ca_06984 I 0.808
Pm019832 Prunus mume Pm019832 I 0.808
PRUPE_ppa025586mg Prunus persica PRUPE_ppa025586mg I 0.808
Ca_05782 Cicer arietinum Ca_05782 I 0.808
PRUPE_ppa025042mg Prunus persica PRUPE_ppa025042mg I 0.808