CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0014s04900
(
Populus trichocarpa
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
POPTR_0014s04900
T354400_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY12
M00898_2.00
Arabidopsis thaliana
NHGGTCAACNN
NNGTTGACCDN
PBM
Franco-Zorrilla et al.(2014)
WRKY12
0.815
0.787
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0014s04900.1
WRKY
4
51
HPIRQSWGGQQSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHS
Links
Other
WRKY
family TFs
Other
Populus trichocarpa
TFs
82 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy