POPTR_0018s11630 (Populus trichocarpa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 POPTR_0018s11630 T354425_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK05432.1
M01324_2.00
Cannabis sativa
NNRGTCARH

DYTGACYNN
PBM
Lambert et al.(2019)
pTH11342
0.815 0.604
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0018s11630.1 WRKY 215 271
POPTR_0018s11630.1 WRKY 387 420
POPTR_0018s11630.2 WRKY 208 264
POPTR_0018s11630.2 WRKY 380 413
POPTR_0018s11630.3 WRKY 211 267
POPTR_0018s11630.3 WRKY 383 416

Links

Other WRKY family TFs
Other Populus trichocarpa TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.1152s0100 Salix purpurea SapurV1A.1152s0100 I 0.843
SapurV1A.4039s0010 Salix purpurea SapurV1A.4039s0010 I 0.840
Ciclev10008135m.g Citrus clementina Ciclev10008135m.g I 0.839
orange1.1g036653m.g Citrus sinensis orange1.1g036653m.g I 0.839
cassava37656.valid.m1 Manihot esculenta cassava37656.valid.m1 I 0.837
Lus10036268.g Linum usitatissimum Lus10036268.g I 0.836
WRKY32 Arabidopsis thaliana AT4G30935 I 0.836
Lus10022150.g Linum usitatissimum Lus10022150.g I 0.836
WRKY32 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000852 I 0.836
Bostr.7867s0950 Boechera stricta Bostr.7867s0950 I 0.835
Carubv10006890m.g Capsella rubella Carubv10006890m.g I 0.835
Cagra.0380s0033 Capsella grandiflora Cagra.0380s0033 I 0.835
Gorai.010G113000 Gossypium raimondii Gorai.010G113000 I 0.835
POPTR_0006s19850 Populus trichocarpa POPTR_0006s19850 I 0.835
MDP0000131218 Malus domestica MDP0000131218 I 0.834
TCM_037060 Theobroma cacao TCM_037060 I 0.833
Cucsa.093390 Cucumis sativus Cucsa.093390 I 0.832
WRKY32 Vitis vinifera VIT_11s0037g00150 I 0.832
Cla019018 Citrullus lanatus Cla019018 I 0.832
gene10079-v1.0-hybrid Fragaria vesca gene10079-v1.0-hybrid I 0.832
Bo7g114840 Brassica oleracea Bo7g114840 I 0.832
MDP0000293456 Malus domestica MDP0000293456 I 0.832
GLYMA02G36510 Glycine max GLYMA02G36510 I 0.831
mgf012709m Mimulus guttatus mgf012709m I 0.831
PRUPE_ppa004042mg Prunus persica PRUPE_ppa004042mg I 0.831
Thhalv10025126m.g Eutrema salsugineum Thhalv10025126m.g I 0.831
Bra024035 Brassica rapa Bra024035 I 0.831
Pm027732 Prunus mume Pm027732 I 0.831
GLYMA17G08170 Glycine max GLYMA17G08170 I 0.831
Bra010266 Brassica rapa Bra010266 I 0.830
PK26499.1 Cannabis sativa PK26499.1 I 0.828
Gorai.001G032200 Gossypium raimondii Gorai.001G032200 I 0.828
chr4.CM0179.130.nc Lotus japonicus chr4.CM0179.130.nc I 0.826
Bo3g175320 Brassica oleracea Bo3g175320 I 0.826
Solyc07g005650.2 Solanum lycopersicum Solyc07g005650.2 I 0.826
chr6.CM0037.700.nc Lotus japonicus chr6.CM0037.700.nc I 0.826
GLYMA12G23950 Glycine max GLYMA12G23950 I 0.824
Eucgr.C02545 Eucalyptus grandis Eucgr.C02545 I 0.824
Ca_03331 Cicer arietinum Ca_03331 I 0.823
Eucgr.C00348 Eucalyptus grandis Eucgr.C00348 I 0.821
VIT_04s0008g06600 Vitis vinifera VIT_04s0008g06600 I 0.820
MTR_4g130900 Medicago truncatula MTR_4g130900 I 0.820
Eucgr.C02481 Eucalyptus grandis Eucgr.C02481 I 0.819
GLYMA06G27440 Glycine max GLYMA06G27440 I 0.819
mgf020482m Mimulus guttatus mgf020482m I 0.816
PK05432.1 Cannabis sativa PK05432.1 D 0.815
Aquca_002_00721 Aquilegia coerulea Aquca_002_00721 I 0.813
Ca_22090 Cicer arietinum Ca_22090 I 0.811
PK20695.1 Cannabis sativa PK20695.1 I 0.811
GLYMA18G49830 Glycine max GLYMA18G49830 I 0.811
GLYMA08G26230 Glycine max GLYMA08G26230 I 0.811
GSMUA_Achr7G00610_001 Musa acuminata GSMUA_Achr7G00610_001 I 0.811
SapurV1A.0001s0200 Salix purpurea SapurV1A.0001s0200 I 0.811
AMTR_s00023p00102530 Amborella trichopoda AMTR_s00023p00102530 I 0.811
WRKY58 Vitis vinifera VIT_14s0108g01280 I 0.811
MTR_7g011820 Medicago truncatula MTR_7g011820 I 0.811
MDP0000431358 Malus domestica MDP0000431358 I 0.810
MDP0000648338 Malus domestica MDP0000648338 I 0.810
VIT_06s0004g07500 Vitis vinifera VIT_06s0004g07500 I 0.810
AMTR_s00058p00090300 Amborella trichopoda AMTR_s00058p00090300 I 0.810
SapurV1A.0466s0170 Salix purpurea SapurV1A.0466s0170 I 0.809
Cucsa.111910 Cucumis sativus Cucsa.111910 I 0.809
chr2.CM0058.50.nc Lotus japonicus chr2.CM0058.50.nc I 0.809
Aquca_005_00209 Aquilegia coerulea Aquca_005_00209 I 0.809
Gorai.003G150700 Gossypium raimondii Gorai.003G150700 I 0.809
MDP0000507805 Malus domestica MDP0000507805 I 0.809
MDP0000514115 Malus domestica MDP0000514115 I 0.809
gene28174-v1.0-hybrid Fragaria vesca gene28174-v1.0-hybrid I 0.809
Pm029293 Prunus mume Pm029293 I 0.809
GLYMA14G38010 Glycine max GLYMA14G38010 I 0.809
Pm015937 Prunus mume Pm015937 I 0.809
POPTR_0001s47670 Populus trichocarpa POPTR_0001s47670 I 0.809
PRUPE_ppa003333mg Prunus persica PRUPE_ppa003333mg I 0.809
Pm000163 Prunus mume Pm000163 I 0.809
VIT_19s0015g01870 Vitis vinifera VIT_19s0015g01870 I 0.809
VIT_01s0011g00220 Vitis vinifera VIT_01s0011g00220 I 0.809
Cla008232 Citrullus lanatus Cla008232 I 0.809
29717.m000222 Ricinus communis 29717.m000222 I 0.809
29820.m001029 Ricinus communis 29820.m001029 I 0.809
GLYMA02G39870 Glycine max GLYMA02G39870 I 0.809
PRUPE_ppa004009mg Prunus persica PRUPE_ppa004009mg I 0.809
PRUPE_ppa003809mg Prunus persica PRUPE_ppa003809mg I 0.809
cassava24475.valid.m1 Manihot esculenta cassava24475.valid.m1 I 0.809
POPTR_0016s13600 Populus trichocarpa POPTR_0016s13600 I 0.809
cassava22187.valid.m1 Manihot esculenta cassava22187.valid.m1 I 0.809
cassava1059.valid.m1 Manihot esculenta cassava1059.valid.m1 I 0.809
cassava22188.valid.m1 Manihot esculenta cassava22188.valid.m1 I 0.809
OPUNC08G17390 Oryza punctata OPUNC08G17390 I 0.808
PGSC0003DMG400016769 Solanum tuberosum PGSC0003DMG400016769 I 0.808
PRUPE_ppa001924mg Prunus persica PRUPE_ppa001924mg I 0.808
OB01G44510 Oryza brachyantha OB01G44510 I 0.808
GSMUA_Achr11G10010_001 Musa acuminata GSMUA_Achr11G10010_001 I 0.808
Bo4g187630 Brassica oleracea Bo4g187630 I 0.808
LjSGA_020468.1 Lotus japonicus LjSGA_020468.1 I 0.808
PDK_20s1777781g001 Phoenix dactylifera PDK_20s1777781g001 I 0.808
GLYMA03G33376 Glycine max GLYMA03G33376 I 0.808
GLYMA04G12830 Glycine max GLYMA04G12830 I 0.808
MTR_3g009470 Medicago truncatula MTR_3g009470 I 0.808
GSMUA_Achr11G10700_001 Musa acuminata GSMUA_Achr11G10700_001 I 0.808
MTR_3g031220 Medicago truncatula MTR_3g031220 I 0.808
Gorai.012G119600 Gossypium raimondii Gorai.012G119600 I 0.808
mgf003063m Mimulus guttatus mgf003063m I 0.808
28966.m000524 Ricinus communis 28966.m000524 I 0.808
Eucgr.B03189 Eucalyptus grandis Eucgr.B03189 I 0.808
gw1.35.201.1 Physcomitrella patens gw1.35.201.1 I 0.808
gw1.157.36.1 Physcomitrella patens gw1.157.36.1 I 0.808
cassava400.valid.m1 Manihot esculenta cassava400.valid.m1 I 0.808
cassava30577.valid.m1 Manihot esculenta cassava30577.valid.m1 I 0.808
Pm000304 Prunus mume Pm000304 I 0.808
gene01197-v1.0-hybrid Fragaria vesca gene01197-v1.0-hybrid I 0.808
TCM_021580 Theobroma cacao TCM_021580 I 0.808
Lus10027139.g Linum usitatissimum Lus10027139.g I 0.808
Lus10032887.g Linum usitatissimum Lus10032887.g I 0.808
Cucsa.041700 Cucumis sativus Cucsa.041700 I 0.808
VIT_08s0058g00690 Vitis vinifera VIT_08s0058g00690 I 0.808
Cla004503 Citrullus lanatus Cla004503 I 0.808
Ca_20508 Cicer arietinum Ca_20508 I 0.808
Solyc06g066370.2 Solanum lycopersicum Solyc06g066370.2 I 0.808