Sb08g002520 (Sorghum bicolor)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Sb08g002520 T354559_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY29
M02558_2.00
Arabidopsis thaliana
NNNGTCHDNN

NNHDGACNNN
PBM
Weirauch et al.(2014)
pTH9604
0.811 0.483
WRKY29
M07410_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY29_col_a
0.811 0.483
WRKY29
M07411_2.00
Arabidopsis thaliana
HWWAGTCAAMDNN

NNHKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a
0.811 0.483
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb08g002520.1 WRKY 117 183

Links

Other WRKY family TFs
Other Sorghum bicolor TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G005207 Zea mays GRMZM2G005207 I 0.884
Si010813m.g Setaria italica Si010813m.g N 0.881
Pavir.Ca00085 Panicum virgatum Pavir.Ca00085 N 0.880
Pavir.J20374 Panicum virgatum Pavir.J20374 N 0.874
Pavir.J12092 Panicum virgatum Pavir.J12092 I 0.865
LPERR12G01100 Leersia perrieri LPERR12G01100 I 0.865
ORGLA11G0202100 Oryza glaberrima ORGLA11G0202100 I 0.864
OBART11G01120 Oryza barthii OBART11G01120 I 0.864
ONIVA11G01190 Oryza nivara ONIVA11G01190 I 0.864
OGLUM11G00880 Oryza glumaepatula OGLUM11G00880 I 0.864
OBART12G00860 Oryza barthii OBART12G00860 I 0.864
ORGLA12G0007700 Oryza glaberrima ORGLA12G0007700 I 0.864
BGIOSGA036755 Oryza indica BGIOSGA036755 I 0.864
BGIOSGA034611 Oryza indica BGIOSGA034611 I 0.864
OB12G11040 Oryza brachyantha OB12G11040 I 0.862
OMERI11G01580 Oryza meridionalis OMERI11G01580 I 0.860
OMERI11G01540 Oryza meridionalis OMERI11G01540 I 0.860
MLOC_68369 Hordeum vulgare MLOC_68369 N 0.856
OPUNC12G01000 Oryza punctata OPUNC12G01000 N 0.854
OPUNC11G00990 Oryza punctata OPUNC11G00990 N 0.854
TRIUR3_24639 Triticum urartu TRIUR3_24639 N 0.851
F775_23346 Aegilops tauschii F775_23346 N 0.851
Traes_5BL_175E7FC38 Triticum aestivum Traes_5BL_175E7FC38 N 0.851
Traes_5DL_09F1F8F79 Triticum aestivum Traes_5DL_09F1F8F79 N 0.851
BRADI4G44342 Brachypodium distachyon BRADI4G44342 N 0.847
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.826
GRMZM2G029292 Zea mays GRMZM2G029292 I 0.822
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.821
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.821
OB11G27340 Oryza brachyantha OB11G27340 I 0.818
OBART05G20330 Oryza barthii OBART05G20330 I 0.817
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I 0.817
LPERR07G11260 Leersia perrieri LPERR07G11260 I 0.817
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.817
Si028202m.g Setaria italica Si028202m.g I 0.815
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I 0.814
GLYMA04G41701 Glycine max GLYMA04G41701 I 0.813
OPUNC05G18000 Oryza punctata OPUNC05G18000 I 0.813
GSMUA_Achr5G08580_001 Musa acuminata GSMUA_Achr5G08580_001 I 0.813
GLYMA06G13090 Glycine max GLYMA06G13090 I 0.813
Gorai.012G014000 Gossypium raimondii Gorai.012G014000 I 0.812
Gorai.009G421200 Gossypium raimondii Gorai.009G421200 I 0.812
Sb02g011050 Sorghum bicolor Sb02g011050 I 0.812
OB05G27850 Oryza brachyantha OB05G27850 I 0.812
Si003782m.g Setaria italica Si003782m.g N 0.812
gene19219-v1.0-hybrid Fragaria vesca gene19219-v1.0-hybrid I 0.812
GRMZM2G139815 Zea mays GRMZM2G139815 I 0.812
OGLUM05G21440 Oryza glumaepatula OGLUM05G21440 I 0.812
Bo1g035810 Brassica oleracea Bo1g035810 I 0.812
LjSGA_021425.1 Lotus japonicus LjSGA_021425.1 I 0.812
Bra013708 Brassica rapa Bra013708 I 0.812
PDK_20s1571901g001 Phoenix dactylifera PDK_20s1571901g001 I 0.812
VIT_16s0050g02510 Vitis vinifera VIT_16s0050g02510 I 0.811
Bra019297 Brassica rapa Bra019297 I 0.811
Bra020814 Brassica rapa Bra020814 I 0.811
Pavir.J31756 Panicum virgatum Pavir.J31756 I 0.811
Bostr.7867s0150 Boechera stricta Bostr.7867s0150 I 0.811
Bo7g108870 Brassica oleracea Bo7g108870 I 0.811
Pavir.Eb03559 Panicum virgatum Pavir.Eb03559 I 0.811
Bo3g165850 Brassica oleracea Bo3g165850 I 0.811
Carubv10005155m.g Capsella rubella Carubv10005155m.g I 0.811
Si036565m.g Setaria italica Si036565m.g I 0.811
Cagra.1226s0001 Capsella grandiflora Cagra.1226s0001 I 0.811
Pm018401 Prunus mume Pm018401 I 0.811
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I 0.811
PRUPE_ppa007708mg Prunus persica PRUPE_ppa007708mg I 0.811
WRKY29 Arabidopsis lyrata fgenesh2_kg.7__1947__AT4G23550.1 I 0.811
GLYMA08G02580 Glycine max GLYMA08G02580 I 0.811
LPERR01G30490 Leersia perrieri LPERR01G30490 I 0.811
Sb01g036180 Sorghum bicolor Sb01g036180 I 0.811
WRKY29 Arabidopsis thaliana AT4G23550 D 0.811
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.810
Pavir.Db02095 Panicum virgatum Pavir.Db02095 I 0.810
Pavir.Bb01218 Panicum virgatum Pavir.Bb01218 I 0.810
Ca_03952 Cicer arietinum Ca_03952 I 0.810
Bo7g088570 Brassica oleracea Bo7g088570 I 0.810
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.810
OB01G44170 Oryza brachyantha OB01G44170 I 0.810
MTR_8g098945 Medicago truncatula MTR_8g098945 I 0.810
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.810
Sb03g038190 Sorghum bicolor Sb03g038190 N 0.810
Pavir.Ba02750 Panicum virgatum Pavir.Ba02750 I 0.810
VIT_02s0025g01280 Vitis vinifera VIT_02s0025g01280 I 0.810
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.810
OS05G0478800 Oryza sativa OS05G0478800 I 0.810
Cagra.1226s0044 Capsella grandiflora Cagra.1226s0044 I 0.809
OMERI01G32480 Oryza meridionalis OMERI01G32480 I 0.809
cassava32454.m1 Manihot esculenta cassava32454.m1 I 0.809
30169.m006533 Ricinus communis 30169.m006533 I 0.809
Si004791m.g Setaria italica Si004791m.g I 0.809
GSMUA_Achr6G05710_001 Musa acuminata GSMUA_Achr6G05710_001 I 0.809
OPUNC01G34270 Oryza punctata OPUNC01G34270 N 0.809
Carubv10006884m.g Capsella rubella Carubv10006884m.g I 0.809
Eucgr.D02324 Eucalyptus grandis Eucgr.D02324 I 0.809
Lus10001902.g Linum usitatissimum Lus10001902.g I 0.808
Sb03g038170 Sorghum bicolor Sb03g038170 I 0.808
Pavir.Da02163 Panicum virgatum Pavir.Da02163 I 0.808
GSMUA_Achr7G22020_001 Musa acuminata GSMUA_Achr7G22020_001 I 0.808
PGSC0003DMG400017990 Solanum tuberosum PGSC0003DMG400017990 I 0.808