WRKY38 (Arabidopsis lyrata)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 scaffold_602308.1 T354590_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN

NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.896 0.983
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM

KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.850 0.661
WRKY63
M02546_2.00
Arabidopsis thaliana
NGGTCAAN

NTTGACCN
PBM
Weirauch et al.(2014)
pTH8182
0.841 0.678
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_602308.1 WRKY 110 170

Links

Other WRKY family TFs
Other Arabidopsis lyrata TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
WRKY38 Arabidopsis thaliana AT5G22570 D 0.896
WRKY63 Arabidopsis thaliana AT1G66600 D 0.841
WRKY62 Arabidopsis thaliana AT5G01900 D 0.850
ONIVA05G08650 Oryza nivara ONIVA05G08650 I 0.816
TRIUR3_14306 Triticum urartu TRIUR3_14306 I 0.813
Traes_4AS_0DA136E0E Triticum aestivum Traes_4AS_0DA136E0E I 0.810
TCM_019689 Theobroma cacao TCM_019689 I 0.818
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.813
Si025181m.g Setaria italica Si025181m.g I 0.823
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.810
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.810
Ca_12915 Cicer arietinum Ca_12915 I 0.814
Ca_18932 Cicer arietinum Ca_18932 I 0.822
Cla018337 Citrullus lanatus Cla018337 I 0.808
Pm003014 Prunus mume Pm003014 I 0.810
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.813
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.828
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.825
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.861
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.813
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.813
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.809
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.812
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.828
ONIVA11G01240 Oryza nivara ONIVA11G01240 I 0.808
OPUNC05G07410 Oryza punctata OPUNC05G07410 I 0.816
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.813
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I 0.816
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.809
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I 0.827
ORGLA11G0202000 Oryza glaberrima ORGLA11G0202000 I 0.808
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I 0.816
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.809
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.812
OS05G0478400 Oryza sativa OS05G0478400 I 0.809
OS05G0478800 Oryza sativa OS05G0478800 I 0.812
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.818
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.842
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.812
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.831
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.832
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.824
Lus10014177.g Linum usitatissimum Lus10014177.g I 0.810
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.809
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.811
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.827
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I 0.815
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I 0.815
Pavir.J39511 Panicum virgatum Pavir.J39511 I 0.815
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.835
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.867
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.858
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.831
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.811
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.835
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.853
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.818
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.858
Cagra.0062s0038 Capsella grandiflora Cagra.0062s0038 I 0.808
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.854
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.853
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.822
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.871
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.871
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.854
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.853
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.847
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.843
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.839
Carubv10022129m.g Capsella rubella Carubv10022129m.g I 0.808
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I 0.810
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.850
Bra002421 Brassica rapa Bra002421 I 0.863
Bra008454 Brassica rapa Bra008454 I 0.840
Bra008456 Brassica rapa Bra008456 I 0.813
Bra008459 Brassica rapa Bra008459 I 0.836
Bra020196 Brassica rapa Bra020196 I 0.862
Bra020197 Brassica rapa Bra020197 I 0.861
Bra023211 Brassica rapa Bra023211 I 0.847
Bra025490 Brassica rapa Bra025490 I 0.809
Bra027675 Brassica rapa Bra027675 I 0.808
Bra027768 Brassica rapa Bra027768 I 0.808
Bra028918 Brassica rapa Bra028918 I 0.869
BRADI4G44350 Brachypodium distachyon BRADI4G44350 I 0.810
F775_00757 Aegilops tauschii F775_00757 I 0.808
F775_07376 Aegilops tauschii F775_07376 I 0.812
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.845
Bo9g033920 Brassica oleracea Bo9g033920 I 0.808
Bo9g030630 Brassica oleracea Bo9g030630 I 0.808
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.850
WRKY67 Arabidopsis thaliana AT1G66550 I 0.848
WRKY64 Arabidopsis thaliana AT1G66560 I 0.847
WRKY66 Arabidopsis thaliana AT1G80590 I 0.846
BGIOSGA017556 Oryza indica BGIOSGA017556 I 0.816
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.812
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.828
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.809
BGIOSGA034612 Oryza indica BGIOSGA034612 I 0.808
Bo01002s040 Brassica oleracea Bo01002s040 I 0.863
Bo2g024040 Brassica oleracea Bo2g024040 I 0.861
Bo2g095820 Brassica oleracea Bo2g095820 I 0.836
Bo4g142200 Brassica oleracea Bo4g142200 I 0.809
Bo5g068250 Brassica oleracea Bo5g068250 I 0.847
Bo6g066790 Brassica oleracea Bo6g066790 I 0.809
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.818
GLYMA04G40121 Glycine max GLYMA04G40121 I 0.811
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.814
OB05G17240 Oryza brachyantha OB05G17240 I 0.822
OB05G27830 Oryza brachyantha OB05G27830 I 0.809
OBART05G08130 Oryza barthii OBART05G08130 I 0.816
OBART05G20340 Oryza barthii OBART05G20340 I 0.812
OBART11G01110 Oryza barthii OBART11G01110 I 0.808
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I 0.816
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.809
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.811
OGLUM11G00870 Oryza glumaepatula OGLUM11G00870 I 0.808
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.825
OLONG_019907 Oryza longistaminata OLONG_019907 I 0.816
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.811
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.809
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.812
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.809
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.810
GLYMA13G34251 Glycine max GLYMA13G34251 I 0.808
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.817
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.810
GRMZM2G441031 Zea mays GRMZM2G441031 I 0.813
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.813
LPERR05G06630 Leersia perrieri LPERR05G06630 I 0.819
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.813
LPERR11G00960 Leersia perrieri LPERR11G00960 I 0.819
LPERR12G01070 Leersia perrieri LPERR12G01070 I 0.814
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.811
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.829
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.815
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.811
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.815
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.829
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.812