CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRAES3BF066700160CFD_g
(
Triticum aestivum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
TRAES3BF066700160CFD_g
T354957_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK25870.1
M01325_2.00
Cannabis sativa
NRGTCAAM
KTTGACYN
PBM
Lambert et al.(2019)
pTH10156
0.843
0.759
WRKY51
M02568_2.00
Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7478
0.833
0.724
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN
NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.825
0.724
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN
NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.825
0.724
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG
CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.809
0.603
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM
KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.809
0.603
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRAES3BF066700160CFD_t1
WRKY
129
186
DDGFRWRKYGKKAVKSSPNLRNYYRCSAEGCGVKKRIERDRDDPRYVLTTYDGVHNHV
Links
Other
WRKY
family TFs
Other
Triticum aestivum
TFs
254 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_27801
Aegilops tauschii
F775_27801
I
0.872
OPUNC01G05450
Oryza punctata
OPUNC01G05450
I
0.864
ORGLA01G0052400
Oryza glaberrima
ORGLA01G0052400
I
0.864
ORUFI01G06050
Oryza rufipogon
ORUFI01G06050
I
0.864
ONIVA01G06360
Oryza nivara
ONIVA01G06360
I
0.864
OMERI01G05840
Oryza meridionalis
OMERI01G05840
I
0.864
GRMZM2G516301
Zea mays
GRMZM2G516301
I
0.864
OGLUM01G06090
Oryza glumaepatula
OGLUM01G06090
I
0.864
Si002621m.g
Setaria italica
Si002621m.g
I
0.864
OS01G0186000
Oryza sativa
OS01G0186000
I
0.864
Pavir.Ea00274
Panicum virgatum
Pavir.Ea00274
I
0.864
Pavir.J08526
Panicum virgatum
Pavir.J08526
I
0.864
BGIOSGA002237
Oryza indica
BGIOSGA002237
I
0.864
MLOC_12079
Hordeum vulgare
MLOC_12079
I
0.862
TRIUR3_29978
Triticum urartu
TRIUR3_29978
I
0.862
Traes_1AS_1432A2F79
Triticum aestivum
Traes_1AS_1432A2F79
I
0.862
Sb03g003360
Sorghum bicolor
Sb03g003360
I
0.861
GRMZM2G163054
Zea mays
GRMZM2G163054
I
0.861
BRADI2G05510
Brachypodium distachyon
BRADI2G05510
I
0.861
BRADI2G33540
Brachypodium distachyon
BRADI2G33540
I
0.859
GRMZM2G057116
Zea mays
GRMZM2G057116
I
0.859
Pavir.Ca01028
Panicum virgatum
Pavir.Ca01028
I
0.859
Si023279m.g
Setaria italica
Si023279m.g
I
0.859
Pavir.J05732
Panicum virgatum
Pavir.J05732
I
0.859
Sb09g005700
Sorghum bicolor
Sb09g005700
I
0.859
LPERR01G05270
Leersia perrieri
LPERR01G05270
I
0.858
F775_19446
Aegilops tauschii
F775_19446
I
0.858
GRMZM2G475984
Zea mays
GRMZM2G475984
I
0.856
LPERR05G04920
Leersia perrieri
LPERR05G04920
I
0.855
OBART05G05560
Oryza barthii
OBART05G05560
I
0.854
OS05G0183100
Oryza sativa
OS05G0183100
I
0.854
OB05G15280
Oryza brachyantha
OB05G15280
I
0.854
OGLUM05G05440
Oryza glumaepatula
OGLUM05G05440
I
0.854
OMERI05G05240
Oryza meridionalis
OMERI05G05240
I
0.854
ORGLA05G0050000
Oryza glaberrima
ORGLA05G0050000
I
0.854
OPUNC05G05190
Oryza punctata
OPUNC05G05190
I
0.854
ONIVA05G06030
Oryza nivara
ONIVA05G06030
I
0.854
ORUFI05G05890
Oryza rufipogon
ORUFI05G05890
I
0.854
BGIOSGA018676
Oryza indica
BGIOSGA018676
I
0.854
GSMUA_Achr7G09680_001
Musa acuminata
GSMUA_Achr7G09680_001
I
0.852
LPERR01G24650
Leersia perrieri
LPERR01G24650
I
0.852
GRMZM2G101405
Zea mays
GRMZM2G101405
I
0.850
OBART01G28780
Oryza barthii
OBART01G28780
I
0.849
OBART01G28750
Oryza barthii
OBART01G28750
I
0.849
MDP0000480547
Malus domestica
MDP0000480547
I
0.849
OMERI01G26280
Oryza meridionalis
OMERI01G26280
I
0.849
OS01G0714800
Oryza sativa
OS01G0714800
I
0.849
ORUFI01G31840
Oryza rufipogon
ORUFI01G31840
I
0.849
OGLUM01G32750
Oryza glumaepatula
OGLUM01G32750
I
0.849
ORGLA01G0238400
Oryza glaberrima
ORGLA01G0238400
I
0.849
BGIOSGA000921
Oryza indica
BGIOSGA000921
I
0.849
OPUNC01G28510
Oryza punctata
OPUNC01G28510
I
0.849
POPTR_0007s06720
Populus trichocarpa
POPTR_0007s06720
I
0.848
Traes_1AL_9ADA7A031
Triticum aestivum
Traes_1AL_9ADA7A031
I
0.847
Sb03g032800
Sorghum bicolor
Sb03g032800
I
0.847
Pavir.Ea02619
Panicum virgatum
Pavir.Ea02619
I
0.846
GLYMA08G15050
Glycine max
GLYMA08G15050
I
0.846
Si004464m.g
Setaria italica
Si004464m.g
I
0.846
GSMUA_Achr3G20450_001
Musa acuminata
GSMUA_Achr3G20450_001
I
0.845
MTR_8g092010
Medicago truncatula
MTR_8g092010
I
0.844
TRAES3BF267200010CFD_g
Triticum aestivum
TRAES3BF267200010CFD_g
I
0.844
SapurV1A.0594s0120
Salix purpurea
SapurV1A.0594s0120
I
0.843
Eucgr.I00317
Eucalyptus grandis
Eucgr.I00317
I
0.843
Pavir.Eb02766
Panicum virgatum
Pavir.Eb02766
I
0.843
PRUPE_ppa015480mg
Prunus persica
PRUPE_ppa015480mg
I
0.843
GLYMA05G31800
Glycine max
GLYMA05G31800
I
0.843
PK25870.1
Cannabis sativa
PK25870.1
D
0.843
Eucgr.C00675
Eucalyptus grandis
Eucgr.C00675
I
0.842
Pm005548
Prunus mume
Pm005548
I
0.842
GLYMA06G15220
Glycine max
GLYMA06G15220
I
0.842
GRMZM5G863420
Zea mays
GRMZM5G863420
I
0.842
chr1.CM0032.340.nd
Lotus japonicus
chr1.CM0032.340.nd
I
0.842
GLYMA04G05700
Glycine max
GLYMA04G05700
I
0.842
OPUNC05G21470
Oryza punctata
OPUNC05G21470
I
0.841
Pavir.J03284
Panicum virgatum
Pavir.J03284
I
0.841
ONIVA05G24830
Oryza nivara
ONIVA05G24830
I
0.841
OMERI01G26720
Oryza meridionalis
OMERI01G26720
I
0.841
Cla022318
Citrullus lanatus
Cla022318
I
0.841
PDK_20s1384091g002
Phoenix dactylifera
PDK_20s1384091g002
I
0.841
BGIOSGA020266
Oryza indica
BGIOSGA020266
I
0.841
Sb09g026830
Sorghum bicolor
Sb09g026830
I
0.841
ORUFI05G25660
Oryza rufipogon
ORUFI05G25660
I
0.841
Si023194m.g
Setaria italica
Si023194m.g
I
0.841
Pavir.Ca01747
Panicum virgatum
Pavir.Ca01747
I
0.841
BRADI2G18530
Brachypodium distachyon
BRADI2G18530
I
0.841
TRIUR3_01979
Triticum urartu
TRIUR3_01979
I
0.841
OS05G0537100
Oryza sativa
OS05G0537100
I
0.841
OBART05G24090
Oryza barthii
OBART05G24090
I
0.841
PDK_20s1512971g002
Phoenix dactylifera
PDK_20s1512971g002
I
0.841
F775_52480
Aegilops tauschii
F775_52480
I
0.841
LPERR05G19900
Leersia perrieri
LPERR05G19900
I
0.841
VIT_07s0031g01710
Vitis vinifera
VIT_07s0031g01710
I
0.840
VIT_04s0008g01470
Vitis vinifera
VIT_04s0008g01470
I
0.840
Eucgr.I00316
Eucalyptus grandis
Eucgr.I00316
I
0.840
mgf026356m
Mimulus guttatus
mgf026356m
I
0.839
cassava14063.valid.m1
Manihot esculenta
cassava14063.valid.m1
I
0.839
OB01G37710
Oryza brachyantha
OB01G37710
I
0.839
TCM_001265
Theobroma cacao
TCM_001265
I
0.839
29771.m000072
Ricinus communis
29771.m000072
I
0.839
MDP0000121669
Malus domestica
MDP0000121669
I
0.839
POPTR_0006s24050
Populus trichocarpa
POPTR_0006s24050
I
0.839
TRAES3BF111700140CFD_g
Triticum aestivum
TRAES3BF111700140CFD_g
I
0.839
cassava14062.valid.m1
Manihot esculenta
cassava14062.valid.m1
I
0.839
PK29640.1
Cannabis sativa
PK29640.1
I
0.839
Gorai.007G245200
Gossypium raimondii
Gorai.007G245200
I
0.839
TRIUR3_33662
Triticum urartu
TRIUR3_33662
I
0.839
Traes_3DL_DF0D3F3FE
Triticum aestivum
Traes_3DL_DF0D3F3FE
I
0.839
BRADI2G48090
Brachypodium distachyon
BRADI2G48090
I
0.838
MTR_3g104750
Medicago truncatula
MTR_3g104750
I
0.838
evm.TU.supercontig_919.2
Carica papaya
evm.TU.supercontig_919.2
I
0.837
POPTR_0005s08720
Populus trichocarpa
POPTR_0005s08720
I
0.837
Bra009885
Brassica rapa
Bra009885
I
0.837
MLOC_10264
Hordeum vulgare
MLOC_10264
I
0.837
MDP0000253189
Malus domestica
MDP0000253189
I
0.837
Solyc08g062490.2
Solanum lycopersicum
Solyc08g062490.2
I
0.837
MLOC_81131
Hordeum vulgare
MLOC_81131
I
0.837
OB05G31630
Oryza brachyantha
OB05G31630
I
0.837
Traes_1DL_D550418641
Triticum aestivum
Traes_1DL_D550418641
I
0.837
29739.m003586
Ricinus communis
29739.m003586
I
0.837
Bo9g011080
Brassica oleracea
Bo9g011080
I
0.837
Ca_09134
Cicer arietinum
Ca_09134
I
0.837
Cucsa.250350
Cucumis sativus
Cucsa.250350
I
0.837
Carubv10027178m.g
Capsella rubella
Carubv10027178m.g
I
0.836
GRMZM2G137802
Zea mays
GRMZM2G137802
I
0.836
Cagra.2438s0022
Capsella grandiflora
Cagra.2438s0022
I
0.836
TCM_037343
Theobroma cacao
TCM_037343
I
0.835
GLYMA04G39650
Glycine max
GLYMA04G39650
I
0.835
GLYMA06G05721
Glycine max
GLYMA06G05721
I
0.835
LjSGA_012799.2
Lotus japonicus
LjSGA_012799.2
I
0.835
Sb03g026170
Sorghum bicolor
Sb03g026170
I
0.835
SapurV1A.0318s0110
Salix purpurea
SapurV1A.0318s0110
I
0.835
Gorai.003G047800
Gossypium raimondii
Gorai.003G047800
I
0.835
Gorai.001G021500
Gossypium raimondii
Gorai.001G021500
I
0.835
cassava28704.m1
Manihot esculenta
cassava28704.m1
I
0.834
Ciclev10026733m.g
Citrus clementina
Ciclev10026733m.g
I
0.834
orange1.1g029257m.g
Citrus sinensis
orange1.1g029257m.g
I
0.834
VIT_04s0069g00970
Vitis vinifera
VIT_04s0069g00970
I
0.833
Ca_04141
Cicer arietinum
Ca_04141
I
0.833
WRKY51
Arabidopsis thaliana
AT5G64810
D
0.833
Pm001825
Prunus mume
Pm001825
I
0.833
WRKY51
Arabidopsis lyrata
fgenesh2_kg.8__2513__AT5G64810.1
I
0.833
cassava10657.m1
Manihot esculenta
cassava10657.m1
I
0.833
Bo7g095430
Brassica oleracea
Bo7g095430
I
0.832
Cucsa.101530
Cucumis sativus
Cucsa.101530
I
0.832
Bra037796
Brassica rapa
Bra037796
I
0.832
GLYMA17G34210
Glycine max
GLYMA17G34210
I
0.832
Bostr.29827s0201
Boechera stricta
Bostr.29827s0201
I
0.832
Thhalv10004930m.g
Eutrema salsugineum
Thhalv10004930m.g
I
0.832
Ciclev10009761m.g
Citrus clementina
Ciclev10009761m.g
I
0.832
orange1.1g031482m.g
Citrus sinensis
orange1.1g031482m.g
I
0.832
Aquca_014_00461
Aquilegia coerulea
Aquca_014_00461
I
0.831
F775_44085
Aegilops tauschii
F775_44085
I
0.831
Carubv10002099m.g
Capsella rubella
Carubv10002099m.g
I
0.831
Bostr.0568s0314
Boechera stricta
Bostr.0568s0314
I
0.831
Bo3g100860
Brassica oleracea
Bo3g100860
I
0.831
Cagra.0998s0013
Capsella grandiflora
Cagra.0998s0013
I
0.831
Bo9g018440
Brassica oleracea
Bo9g018440
I
0.831
Bra024328
Brassica rapa
Bra024328
I
0.831
Solyc04g051690.2
Solanum lycopersicum
Solyc04g051690.2
I
0.831
Gorai.010G098000
Gossypium raimondii
Gorai.010G098000
I
0.830
evm.TU.supercontig_126.49
Carica papaya
evm.TU.supercontig_126.49
I
0.830
MTR_1g015140
Medicago truncatula
MTR_1g015140
I
0.830
Lus10006848.g
Linum usitatissimum
Lus10006848.g
I
0.829
AMTR_s00078p00145410
Amborella trichopoda
AMTR_s00078p00145410
I
0.829
GSMUA_Achr8G26240_001
Musa acuminata
GSMUA_Achr8G26240_001
I
0.829
TCM_035897
Theobroma cacao
TCM_035897
I
0.829
TRIUR3_24021
Triticum urartu
TRIUR3_24021
I
0.829
ORUFI01G23500
Oryza rufipogon
ORUFI01G23500
I
0.828
OBART01G20830
Oryza barthii
OBART01G20830
I
0.828
OPUNC01G20950
Oryza punctata
OPUNC01G20950
I
0.828
ONIVA01G23410
Oryza nivara
ONIVA01G23410
I
0.828
OLONG_016272
Oryza longistaminata
OLONG_016272
I
0.828
Bo2g166420
Brassica oleracea
Bo2g166420
I
0.828
OGLUM01G24490
Oryza glumaepatula
OGLUM01G24490
I
0.828
LPERR01G17790
Leersia perrieri
LPERR01G17790
I
0.828
Bra031900
Brassica rapa
Bra031900
I
0.828
BGIOSGA003851
Oryza indica
BGIOSGA003851
I
0.828
OS01G0584900
Oryza sativa
OS01G0584900
I
0.828
OMERI01G18980
Oryza meridionalis
OMERI01G18980
I
0.828
28644.m000915
Ricinus communis
28644.m000915
I
0.828
Bo2g155960
Brassica oleracea
Bo2g155960
I
0.827
Gorai.011G114200
Gossypium raimondii
Gorai.011G114200
I
0.827
Bra020546
Brassica rapa
Bra020546
I
0.827
PGSC0003DMG401031196
Solanum tuberosum
PGSC0003DMG401031196
I
0.826
Pavir.Ea02041
Panicum virgatum
Pavir.Ea02041
I
0.826
Pavir.Eb02454
Panicum virgatum
Pavir.Eb02454
I
0.826
Lus10036624.g
Linum usitatissimum
Lus10036624.g
I
0.826
Lus10035841.g
Linum usitatissimum
Lus10035841.g
I
0.826
MTR_3g095040
Medicago truncatula
MTR_3g095040
I
0.826
Thhalv10005029m.g
Eutrema salsugineum
Thhalv10005029m.g
I
0.826
SapurV1A.1151s0090
Salix purpurea
SapurV1A.1151s0090
I
0.825
GLYMA14G11440
Glycine max
GLYMA14G11440
I
0.825
WRKY50
Arabidopsis thaliana
AT5G26170
D
0.825
Ca_03825
Cicer arietinum
Ca_03825
I
0.824
Si002862m.g
Setaria italica
Si002862m.g
I
0.824
gene22024-v1.0-hybrid
Fragaria vesca
gene22024-v1.0-hybrid
I
0.823
Solyc04g072070.2
Solanum lycopersicum
Solyc04g072070.2
I
0.823
VIT_04s0069g00980
Vitis vinifera
VIT_04s0069g00980
I
0.822
chr4.CM0333.60.nd
Lotus japonicus
chr4.CM0333.60.nd
I
0.822
Gorai.010G131300
Gossypium raimondii
Gorai.010G131300
I
0.821
PDK_20s1331611g001
Phoenix dactylifera
PDK_20s1331611g001
I
0.821
WRKY50
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_6002222
I
0.819
PGSC0003DMG400033177
Solanum tuberosum
PGSC0003DMG400033177
I
0.818
Pavir.Fa01143
Panicum virgatum
Pavir.Fa01143
N
0.818
PDK_20s1746561g001
Phoenix dactylifera
PDK_20s1746561g001
I
0.817
OB01G30460
Oryza brachyantha
OB01G30460
I
0.817
PGSC0003DMG400031140
Solanum tuberosum
PGSC0003DMG400031140
I
0.817
MDP0000299555
Malus domestica
MDP0000299555
I
0.817
Solyc12g056750.1
Solanum lycopersicum
Solyc12g056750.1
I
0.816
PGSC0003DMG400023196
Solanum tuberosum
PGSC0003DMG400023196
I
0.816
GSMUA_Achr7G23980_001
Musa acuminata
GSMUA_Achr7G23980_001
I
0.815
chr1.CM0133.390.nc
Lotus japonicus
chr1.CM0133.390.nc
I
0.815
PGSC0003DMG400011457
Solanum tuberosum
PGSC0003DMG400011457
I
0.813
Traes_4AL_C2A825B6D
Triticum aestivum
Traes_4AL_C2A825B6D
I
0.813
gene15421-v1.0-hybrid
Fragaria vesca
gene15421-v1.0-hybrid
I
0.813
e_gw1.159.68.1
Physcomitrella patens
e_gw1.159.68.1
I
0.813
e_gw1.35.333.1
Physcomitrella patens
e_gw1.35.333.1
I
0.813
SELMODRAFT_49409
Selaginella moellendorffii
SELMODRAFT_49409
I
0.813
gw1.198.128.1
Physcomitrella patens
gw1.198.128.1
I
0.813
SELMODRAFT_69431
Selaginella moellendorffii
SELMODRAFT_69431
I
0.813
SELMODRAFT_69423
Selaginella moellendorffii
SELMODRAFT_69423
I
0.813
orange1.1g017479m.g
Citrus sinensis
orange1.1g017479m.g
I
0.812
Ciclev10005203m.g
Citrus clementina
Ciclev10005203m.g
I
0.812
Solyc05g053380.2
Solanum lycopersicum
Solyc05g053380.2
I
0.811
PGSC0003DMG400007788
Solanum tuberosum
PGSC0003DMG400007788
I
0.810
Bra020628
Brassica rapa
Bra020628
I
0.810
PGSC0003DMG400027208
Solanum tuberosum
PGSC0003DMG400027208
I
0.810
e_gw1.25.129.1
Physcomitrella patens
e_gw1.25.129.1
I
0.810
SELMODRAFT_18136
Selaginella moellendorffii
SELMODRAFT_18136
I
0.810
SELMODRAFT_29247
Selaginella moellendorffii
SELMODRAFT_29247
I
0.810
Cagra.6400s0009
Capsella grandiflora
Cagra.6400s0009
I
0.809
Bostr.25993s0034
Boechera stricta
Bostr.25993s0034
I
0.809
e_gw1.235.59.1
Physcomitrella patens
e_gw1.235.59.1
I
0.809
Thhalv10001802m.g
Eutrema salsugineum
Thhalv10001802m.g
I
0.809
Bra004466
Brassica rapa
Bra004466
I
0.809
SELMODRAFT_69405
Selaginella moellendorffii
SELMODRAFT_69405
I
0.809
Carubv10023565m.g
Capsella rubella
Carubv10023565m.g
I
0.809
Bo4g198560
Brassica oleracea
Bo4g198560
I
0.809
Bo4g004680
Brassica oleracea
Bo4g004680
I
0.809
SELMODRAFT_18126
Selaginella moellendorffii
SELMODRAFT_18126
I
0.809
Bra021393
Brassica rapa
Bra021393
I
0.809
WRKY23
Arabidopsis thaliana
AT2G47260
D
0.809
WRKY23
Arabidopsis lyrata
Al_scaffold_0004_3432
I
0.809
Bo7g044930
Brassica oleracea
Bo7g044930
I
0.809
TCM_021400
Theobroma cacao
TCM_021400
I
0.808
POPTR_0008s10280
Populus trichocarpa
POPTR_0008s10280
I
0.808
GLYMA17G03950
Glycine max
GLYMA17G03950
I
0.808
GLYMA07G36640
Glycine max
GLYMA07G36640
I
0.808
cassava43001.valid.m1
Manihot esculenta
cassava43001.valid.m1
I
0.808
Eucgr.H00996
Eucalyptus grandis
Eucgr.H00996
I
0.808
SapurV1A.0050s0250
Salix purpurea
SapurV1A.0050s0250
I
0.808
Lus10037785.g
Linum usitatissimum
Lus10037785.g
I
0.808
evm.TU.supercontig_9.36
Carica papaya
evm.TU.supercontig_9.36
I
0.808
SapurV1A.0114s0240
Salix purpurea
SapurV1A.0114s0240
I
0.808