Ca_05815 (Cicer arietinum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Ca_05815 T355225_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY53
M01090_2.00
Arabidopsis thaliana
RGTCAACNN

NNGTTGACY
PBM
Sullivan et al.(2014)
pTH8245
0.853 0.763
WRKY30
M02563_2.00
Arabidopsis thaliana
RGTCAACNNN

NNNGTTGACY
PBM
Weirauch et al.(2014)
pTH7611
0.843 0.695
WRKY30
M07422_2.00
Arabidopsis thaliana
DAAGTCAACGN

NCGTTGACTTH
Dap-seq
OMalley et al.(2016)
WRKY30_col_a
0.843 0.695
WRKY30
M07423_2.00
Arabidopsis thaliana
NNAAGTCAACGNH

DNCGTTGACTTNN
Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a
0.843 0.695
WRKY55
M07392_2.00
Arabidopsis thaliana
HWAGTCAACGNH

DNCGTTGACTWD
Dap-seq
OMalley et al.(2016)
WRKY55_col_a
0.815 0.627
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN

NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.811 0.627
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.808 0.610
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG

CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.808 0.610
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_05815 WRKY 132 192

Links

Other WRKY family TFs
Other Cicer arietinum TFs

Invalid Input OrderBy

495 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action