Cla004301 (Citrullus lanatus)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cla004301 T355273_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY30
M02563_2.00
Arabidopsis thaliana
RGTCAACNNN

NNNGTTGACY
PBM
Weirauch et al.(2014)
pTH7611
0.839 0.780
WRKY30
M07422_2.00
Arabidopsis thaliana
DAAGTCAACGN

NCGTTGACTTH
Dap-seq
OMalley et al.(2016)
WRKY30_col_a
0.839 0.780
WRKY30
M07423_2.00
Arabidopsis thaliana
NNAAGTCAACGNH

DNCGTTGACTTNN
Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a
0.839 0.780
WRKY53
M01090_2.00
Arabidopsis thaliana
RGTCAACNN

NNGTTGACY
PBM
Sullivan et al.(2014)
pTH8245
0.838 0.763
Q40828_PETCR
M11467_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY_Q2
0.812 0.559
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla004301 WRKY 139 199

Links

Other WRKY family TFs
Other Citrullus lanatus TFs

Invalid Input OrderBy

433 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action