Cla016798 (Citrullus lanatus)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cla016798 T355305_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY2
M02567_2.00
Arabidopsis thaliana
BRGTCAAM

KTTGACYV
PBM
Weirauch et al.(2014)
pTH8832
0.861 0.843
WRKY3
M07381_2.00
Arabidopsis thaliana
MAWAGTCAAMR

YKTTGACTWTK
Dap-seq
OMalley et al.(2016)
WRKY3_col_a
0.860 0.861
PK05432.1
M01324_2.00
Cannabis sativa
NNRGTCARH

DYTGACYNN
PBM
Lambert et al.(2019)
pTH11342
0.858 0.887
WRKY20
M07414_2.00
Arabidopsis thaliana
HHHRGTCAAMGNH

DNCKTTGACYDDD
Dap-seq
OMalley et al.(2016)
WRKY20_col_a
0.856 0.826
Q40090_IPOBA
M11466_2.00
Ipomoea batatas Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPF1_Q2
0.855 0.843
WRKY33
M02554_2.00
Arabidopsis thaliana
NNRGTCHDNN

NNHDGACYNN
PBM
Weirauch et al.(2014)
pTH8183
0.849 0.817
WRKY33
M07391_2.00
Arabidopsis thaliana
HWWAGTCAAMD

HKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY33_col_a
0.849 0.817
WRKY26
M07418_2.00
Arabidopsis thaliana
MWAAGTCAACGNH

DNCGTTGACTWWK
Dap-seq
OMalley et al.(2016)
WRKY26_col_a
0.845 0.765
WRKY26
M07419_2.00
Arabidopsis thaliana
HMWAGTCAAMR

YKTTGACTWKD
Dap-seq
OMalley et al.(2016)
WRKY26_colamp_a
0.845 0.765
ZAP1
M02726_2.00
Arabidopsis thaliana
DRCKCGGTCAA

TTGACCGMGYH
SELEX
Mathelier et al.(2014)
MA0589.1
0.845 0.678
ZAP1
M11463_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_01
0.845 0.678
WRKY25
M02552_2.00
Arabidopsis thaliana
YRGTCAAM

KTTGACYR
PBM
Weirauch et al.(2014)
pTH8810
0.838 0.722
WRKY25
M07387_2.00
Arabidopsis thaliana
HWWRGTCAAMR

YKTTGACYWWD
Dap-seq
OMalley et al.(2016)
WRKY25_col_a
0.838 0.722
WRKY25
M07388_2.00
Arabidopsis thaliana
NNNHWRGTCAACRNH

DNYGTTGACYWDNNN
Dap-seq
OMalley et al.(2016)
WRKY25_colamp_a
0.838 0.722
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla016798 WRKY 231 287
Cla016798 WRKY 391 448

Links

Other WRKY family TFs
Other Citrullus lanatus TFs

790 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL001230 Aedes aegypti AAEL001230 N 0.000
Aan_R008628 Calypte anna Aan_R008628 N 0.000
AARA002561 Anopheles arabiensis AARA002561 N 0.000
ACHR008455 Anopheles christyi ACHR008455 N 0.000
ACUA023712 Anopheles culicifacies ACUA023712 N 0.000
ADIR004650 Anopheles dirus ADIR004650 N 0.000
Afo_R015783 Aptenodytes forsteri Afo_R015783 N 0.000
AFUN000252 Anopheles funestus AFUN000252 N 0.000
AGAP000875 Anopheles gambiae AGAP000875 N 0.000
Alligator_sinensis_CCG007256.1 Alligator sinensis Alligator_sinensis_CCG007256.1 N 0.000
AMEC011182 Anopheles melas AMEC011182 N 0.000
AMIN005800 Anopheles minimus AMIN005800 N 0.000
AQUA002448 Anopheles quadriannulatus AQUA002448 N 0.000
ASIS023610 Anopheles sinensis ASIS023610 N 0.000
ASTEI01189 Anopheles stephensi ASTEI01189 N 0.000
CapteG179381 Capitella teleta CapteG179381 N 0.000
CG43689 Drosophila melanogaster FBgn0263772 I 0.000
CGI_10022679 Crassostrea gigas CGI_10022679 N 0.000
ci-mytf Ciona intestinalis ENSCING00000007794 N 0.000
D917_04267 Trichinella nativa D917_04267 N 0.000
D918_01045 Trichuris suis D918_01045 N 0.000
ENSAMEG00000015014 Ailuropoda melanoleuca ENSAMEG00000015014 I 0.000
ENSAMXG00000004259 Astyanax mexicanus ENSAMXG00000004259 N 0.000
ENSAMXG00000013895 Astyanax mexicanus ENSAMXG00000013895 N 0.000
ENSBTAP00000004603-D1 Bos grunniens ENSBTAP00000004603-D1 N 0.000
ENSCSAG00000006922 Chlorocebus sabaeus ENSCSAG00000006922 N 0.000
ENSCSAVG00000009233 Ciona savignyi ENSCSAVG00000009233 N 0.000
ENSFALG00000002053 Ficedula albicollis ENSFALG00000002053 N 0.000
ENSGMOG00000000679 Gadus morhua ENSGMOG00000000679 N 0.000
ENSGMOG00000012782 Gadus morhua ENSGMOG00000012782 N 0.000
ENSLACG00000002582 Latimeria chalumnae ENSLACG00000002582 N 0.000
ENSLACG00000014372 Latimeria chalumnae ENSLACG00000014372 N 0.000
ENSLOCG00000017216 Lepisosteus oculatus ENSLOCG00000017216 N 0.000
ENSMEUG00000001386 Macropus eugenii ENSMEUG00000001386 N 0.000
ENSONIG00000011665 Oreochromis niloticus ENSONIG00000011665 N 0.000
ENSONIG00000018694 Oreochromis niloticus ENSONIG00000018694 N 0.000
ENSPFOG00000005354 Poecilia formosa ENSPFOG00000005354 N 0.000
ENSPMAG00000001124 Petromyzon marinus ENSPMAG00000001124 N 0.000
ENSSHAG00000015433 Sarcophilus harrisii ENSSHAG00000015433 N 0.000
ENSTSYG00000008880 Tarsius syrichta ENSTSYG00000008880 N 0.000
Gfo_R002934 Geospiza fortis Gfo_R002934 N 0.000
LDEC007508 Leptinotarsa decemlineata LDEC007508 N 0.000
MCINX013435 Melitaea cinxia MCINX013435 N 0.000
Myotis_brandtii_MYT1L_10020908 Myotis brandtii Myotis_brandtii_MYT1L_10020908 N 0.000
MYT1 Takifugu rubripes ENSTRUG00000002124 N 0.000
MYT1L Echinops telfairi ENSETEG00000015771 N 0.000
MYT1L Loxodonta africana ENSLAFG00000002751 N 0.000
MYT1L Oryctolagus cuniculus ENSOCUG00000016764 N 0.000
MYT1L Otolemur garnettii ENSOGAG00000010219 N 0.000
MYT1L Dasypus novemcinctus ENSDNOG00000037275 N 0.000
MYT1L Oryzias latipes ENSORLG00000017852 N 0.000
MYT1L Tetraodon nigroviridis ENSTNIG00000008296 N 0.000
MYT1L Takifugu rubripes ENSTRUG00000003414 N 0.000
myt1la Takifugu rubripes ENSTRUG00000015790 N 0.000
NEMVEDRAFT_v1g242817 Nematostella vectensis NEMVEDRAFT_v1g242817 N 0.000
Pvit_03612 Pogona vitticeps Pvit_03612 N 0.000
ST18 Callithrix jacchus ENSCJAG00000014630 N 0.000
Tal_R003131 Tyto alba Tal_R003131 N 0.000
tetur15g00740 Tetranychus urticae tetur15g00740 N 0.000
TMUE_s0020007600 Trichuris muris TMUE_s0020007600 N 0.000