Pm003013 (Prunus mume)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pm003013 T355334_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.830 0.627
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG

CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.830 0.627
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN

NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.823 0.610
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm003013 WRKY 153 213

Links

Other WRKY family TFs
Other Prunus mume TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
WRKY46 Arabidopsis thaliana AT2G46400 D 0.830
WRKY70 Arabidopsis thaliana AT3G56400 D 0.823
Cagra.0483s0080 Capsella grandiflora Cagra.0483s0080 I 0.821
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.823
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.841
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.875
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.858
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I 0.828
29915.m000479 Ricinus communis 29915.m000479 I 0.863
29729.m002369 Ricinus communis 29729.m002369 I 0.829
Pm019286 Prunus mume Pm019286 I 0.809
Pm003015 Prunus mume Pm003015 I 0.880
Pm003014 Prunus mume Pm003014 I 0.850
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.823
Cucsa.143830 Cucumis sativus Cucsa.143830 I 0.824
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.850
Cagra.0050s0059 Capsella grandiflora Cagra.0050s0059 I 0.823
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.810
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.812
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.808
Bostr.25993s0129 Boechera stricta Bostr.25993s0129 I 0.827
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I 0.818
Bostr.13158s0168 Boechera stricta Bostr.13158s0168 I 0.817
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.835
mgf009193m Mimulus guttatus mgf009193m I 0.854
mgf002542m Mimulus guttatus mgf002542m I 0.838
Cla018337 Citrullus lanatus Cla018337 I 0.847
Cla007424 Citrullus lanatus Cla007424 I 0.817
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.812
Si036565m.g Setaria italica Si036565m.g I 0.817
Si022702m.g Setaria italica Si022702m.g I 0.829
Si015433m.g Setaria italica Si015433m.g I 0.813
Si012735m.g Setaria italica Si012735m.g I 0.822
Sb08g005080 Sorghum bicolor Sb08g005080 I 0.816
Sb07g019400 Sorghum bicolor Sb07g019400 I 0.809
Sb02g022290 Sorghum bicolor Sb02g022290 I 0.809
Sb02g022280 Sorghum bicolor Sb02g022280 I 0.810
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.902
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.831
TCM_019689 Theobroma cacao TCM_019689 I 0.860
TCM_045556 Theobroma cacao TCM_045556 I 0.829
Ca_18932 Cicer arietinum Ca_18932 I 0.839
Ca_12915 Cicer arietinum Ca_12915 I 0.819
Ca_09495 Cicer arietinum Ca_09495 I 0.824
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.808
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.830
TRIUR3_22128 Triticum urartu TRIUR3_22128 I 0.812
TRIUR3_04352 Triticum urartu TRIUR3_04352 I 0.821
Traes_7DL_A9EF00572 Triticum aestivum Traes_7DL_A9EF00572 I 0.822
Traes_2BS_B65714572 Triticum aestivum Traes_2BS_B65714572 I 0.814
Traes_2AS_6269D889E Triticum aestivum Traes_2AS_6269D889E I 0.812
PRUPE_ppa026125mg Prunus persica PRUPE_ppa026125mg I 0.809
Cagra.0925s0056 Capsella grandiflora Cagra.0925s0056 I 0.813
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.811
Pavir.Cb01173 Panicum virgatum Pavir.Cb01173 I 0.829
Pavir.Ca02012 Panicum virgatum Pavir.Ca02012 I 0.829
Pavir.Bb02088 Panicum virgatum Pavir.Bb02088 I 0.814
Pavir.Ba02545 Panicum virgatum Pavir.Ba02545 I 0.814
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.828
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.859
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.810
MDP0000754989 Malus domestica MDP0000754989 I 0.863
MDP0000578301 Malus domestica MDP0000578301 I 0.826
MDP0000175240 Malus domestica MDP0000175240 I 0.829
Pavir.Fa01520 Panicum virgatum Pavir.Fa01520 I 0.815
Pavir.Gb01556 Panicum virgatum Pavir.Gb01556 I 0.820
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.813
PK21378.1 Cannabis sativa PK21378.1 I 0.812
PK10616.1 Cannabis sativa PK10616.1 I 0.815
PK03324.1 Cannabis sativa PK03324.1 I 0.846
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.824
Thhalv10001568m.g Eutrema salsugineum Thhalv10001568m.g I 0.820
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.848
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.848
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.857
Pavir.J37854 Panicum virgatum Pavir.J37854 I 0.815
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.813
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.811
Lus10025133.g Linum usitatissimum Lus10025133.g I 0.811
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.824
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I 0.836
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.821
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.810
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.828
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.859
Carubv10023578m.g Capsella rubella Carubv10023578m.g I 0.823
Carubv10019489m.g Capsella rubella Carubv10019489m.g I 0.817
Carubv10017349m.g Capsella rubella Carubv10017349m.g I 0.817
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.811
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I 0.822
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.832
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.831
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I 0.819
Gorai.012G013900 Gossypium raimondii Gorai.012G013900 I 0.808
Gorai.010G219200 Gossypium raimondii Gorai.010G219200 I 0.820
Gorai.009G292600 Gossypium raimondii Gorai.009G292600 I 0.821
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.835
gene21365-v1.0-hybrid Fragaria vesca gene21365-v1.0-hybrid I 0.813
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.849
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.850
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.851
gene13546-v1.0-hybrid Fragaria vesca gene13546-v1.0-hybrid I 0.863
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.811
LPERR05G09130 Leersia perrieri LPERR05G09130 I 0.822
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.824
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.826
WRKY46 Arabidopsis lyrata fgenesh2_kg.4__2854__AT2G46400.1 I 0.826
fgenesh1_pm.C_scaffold_5002145 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5002145 I 0.818
F775_32858 Aegilops tauschii F775_32858 I 0.812
F775_25840 Aegilops tauschii F775_25840 I 0.814
F775_07845 Aegilops tauschii F775_07845 I 0.813
F775_07376 Aegilops tauschii F775_07376 I 0.810
BRADI4G28280 Brachypodium distachyon BRADI4G28280 I 0.810
BRADI3G34850 Brachypodium distachyon BRADI3G34850 I 0.815
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.813
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.814
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.837
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.810
GSMUA_Achr5G07490_001 Musa acuminata GSMUA_Achr5G07490_001 I 0.820
GRMZM2G163418 Zea mays GRMZM2G163418 I 0.813
GRMZM2G061408 Zea mays GRMZM2G061408 I 0.815
GRMZM2G025895 Zea mays GRMZM2G025895 I 0.815
GRMZM2G004060 Zea mays GRMZM2G004060 I 0.816
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.828
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.830
GLYMA13G34281 Glycine max GLYMA13G34281 I 0.817
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.825
BRADI2G44270 Brachypodium distachyon BRADI2G44270 I 0.817
BRADI2G30695 Brachypodium distachyon BRADI2G30695 I 0.832
Bo4g190390 Brassica oleracea Bo4g190390 I 0.809
Bo4g101290 Brassica oleracea Bo4g101290 I 0.817
Bo4g009270 Brassica oleracea Bo4g009270 I 0.821
Bo3g039240 Brassica oleracea Bo3g039240 I 0.821
Bo2g024040 Brassica oleracea Bo2g024040 I 0.810
Bo00913s010 Brassica oleracea Bo00913s010 I 0.811
BGIOSGA040489 Oryza indica BGIOSGA040489 I 0.812
BGIOSGA030535 Oryza indica BGIOSGA030535 I 0.808
BGIOSGA019621 Oryza indica BGIOSGA019621 I 0.826
BGIOSGA012571 Oryza indica BGIOSGA012571 I 0.814
Bo6g071110 Brassica oleracea Bo6g071110 I 0.821
Bo8g090820 Brassica oleracea Bo8g090820 I 0.823
Bra000423 Brassica rapa Bra000423 I 0.828
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I 0.817
BRADI1G17660 Brachypodium distachyon BRADI1G17660 I 0.809
Bra020197 Brassica rapa Bra020197 I 0.810
Bra020196 Brassica rapa Bra020196 I 0.815
Bra016974 Brassica rapa Bra016974 I 0.809
Bra014692 Brassica rapa Bra014692 I 0.811
Bra014426 Brassica rapa Bra014426 I 0.816
Bra007243 Brassica rapa Bra007243 I 0.820
Bra004540 Brassica rapa Bra004540 I 0.821
Bra003239 Brassica rapa Bra003239 I 0.816
AMTR_s00077p00103580 Amborella trichopoda AMTR_s00077p00103580 I 0.808
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.873
ORUFI08G15010 Oryza rufipogon ORUFI08G15010 I 0.812
ORUFI05G12710 Oryza rufipogon ORUFI05G12710 I 0.826
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I 0.814
ORGLA08G0116200 Oryza glaberrima ORGLA08G0116200 I 0.812
ORGLA05G0099400 Oryza glaberrima ORGLA05G0099400 I 0.826
OPUNC05G10020 Oryza punctata OPUNC05G10020 I 0.826
ONIVA09G05410 Oryza nivara ONIVA09G05410 I 0.808
ONIVA08G13920 Oryza nivara ONIVA08G13920 I 0.812
ONIVA05G12100 Oryza nivara ONIVA05G12100 I 0.826
ONIVA03G17390 Oryza nivara ONIVA03G17390 I 0.814
ORUFI09G06720 Oryza rufipogon ORUFI09G06720 I 0.809
OS03G0335200 Oryza sativa OS03G0335200 I 0.814
OS05G0322900 Oryza sativa OS05G0322900 I 0.826
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.850
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.860
POPTR_0013s09470 Populus trichocarpa POPTR_0013s09470 I 0.820
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.845
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.831
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.834
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.813
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.843
OS09G0334500 Oryza sativa OS09G0334500 I 0.809
OS08G0386200 Oryza sativa OS08G0386200 I 0.812
OMERI08G11390 Oryza meridionalis OMERI08G11390 I 0.812
OMERI05G10380 Oryza meridionalis OMERI05G10380 I 0.826
OMERI03G14670 Oryza meridionalis OMERI03G14670 I 0.814
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.818
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.829
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.813
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.833
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.829
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.813
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.814
MLOC_71897 Hordeum vulgare MLOC_71897 I 0.813
MLOC_66134 Hordeum vulgare MLOC_66134 I 0.828
MLOC_5971 Hordeum vulgare MLOC_5971 I 0.812
LPERR09G04330 Leersia perrieri LPERR09G04330 I 0.810
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.824
LPERR08G11030 Leersia perrieri LPERR08G11030 I 0.808
OGLUM07G10380 Oryza glumaepatula OGLUM07G10380 I 0.812
OGLUM05G12430 Oryza glumaepatula OGLUM05G12430 I 0.826
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I 0.814
OBART05G11710 Oryza barthii OBART05G11710 I 0.826
OBART03G16400 Oryza barthii OBART03G16400 I 0.814
OB05G17240 Oryza brachyantha OB05G17240 I 0.810
OB03G26140 Oryza brachyantha OB03G26140 I 0.824
OLONG_024544 Oryza longistaminata OLONG_024544 I 0.814
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N 0.828
LjSGA_120786.1 Lotus japonicus LjSGA_120786.1 N 0.808
F775_02479 Aegilops tauschii F775_02479 N 0.821
TRIUR3_26571 Triticum urartu TRIUR3_26571 N 0.821
MTR_8g032510 Medicago truncatula MTR_8g032510 N 0.817
Pavir.Ga01476 Panicum virgatum Pavir.Ga01476 N 0.812