29848.m004544 (Ricinus communis)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 29848.m004544 T355416_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY40
M02548_2.00 		Arabidopsis thaliana
NRGTCAWN
NWTGACYN		 PBM
Weirauch et al.(2014)
pTH8398 		0.816 0.596
WRKY40
M07379_2.00 		Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN		 Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a 		0.816 0.596
WRKY40
M07380_2.00 		Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY40_col 		0.816 0.596
WRKY40
M08180_2.00 		Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN		 ChIP-seq
Mathelier et al.(2014)
MA1085.2 		0.816 0.596
WRKY60
M02551_2.00 		Arabidopsis thaliana
NYGGTCAAMNN
NNKTTGACCRN		 PBM
Weirauch et al.(2014)
pTH7379 		0.814 0.615
WRKY18
M02560_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7360 		0.813 0.635
WRKY18
M00900_2.00 		Arabidopsis thaliana
NVGTCNN
NNGACBN		 PBM
Franco-Zorrilla et al.(2014)
WRKY18 		0.813 0.635
WRKY18
M07416_2.00 		Arabidopsis thaliana
NNHRGTCAASR
YSTTGACYDNN		 Dap-seq
OMalley et al.(2016)
WRKY18_col_a 		0.813 0.635
WRKY18
M07417_2.00 		Arabidopsis thaliana
NNNHWAGTCAANR
YNTTGACTWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a 		0.813 0.635
WRKY18
M11465_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY18_Q2 		0.813 0.635
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29848.m004544 WRKY 85 136

Links

Other WRKY family TFs
Other Ricinus communis TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_127.27 Carica papaya evm.TU.supercontig_127.27 I 0.826
Eucgr.F04317 Eucalyptus grandis Eucgr.F04317 I 0.824
Eucgr.C02659 Eucalyptus grandis Eucgr.C02659 I 0.824
AMTR_s00065p00201230 Amborella trichopoda AMTR_s00065p00201230 I 0.824
Carubv10020726m.g Capsella rubella Carubv10020726m.g I 0.822
SapurV1A.0372s0170 Salix purpurea SapurV1A.0372s0170 I 0.821
MDP0000263349 Malus domestica MDP0000263349 I 0.821
cassava18395.valid.m1 Manihot esculenta cassava18395.valid.m1 I 0.821
POPTR_0018s02480 Populus trichocarpa POPTR_0018s02480 I 0.821
GSMUA_Achr4G01930_001 Musa acuminata GSMUA_Achr4G01930_001 I 0.821
Ca_01713 Cicer arietinum Ca_01713 I 0.820
TCM_036912 Theobroma cacao TCM_036912 I 0.820
cassava8103.valid.m1 Manihot esculenta cassava8103.valid.m1 I 0.820
Gorai.001G037700 Gossypium raimondii Gorai.001G037700 I 0.820
Traes_5AL_7164FEAC3 Triticum aestivum Traes_5AL_7164FEAC3 I 0.820
Gorai.009G062400 Gossypium raimondii Gorai.009G062400 I 0.820
MTR_3g106060 Medicago truncatula MTR_3g106060 I 0.820
WRKY18 Arabidopsis thaliana AT4G31800 D 0.819
F775_19657 Aegilops tauschii F775_19657 I 0.818
evm.TU.supercontig_127.25 Carica papaya evm.TU.supercontig_127.25 I 0.818
TRIUR3_16802 Triticum urartu TRIUR3_16802 I 0.818
Traes_5BL_90757F0CC Triticum aestivum Traes_5BL_90757F0CC I 0.818
Traes_5DL_32D78D06A Triticum aestivum Traes_5DL_32D78D06A I 0.818
chr5.CM0040.550.nd Lotus japonicus chr5.CM0040.550.nd I 0.818
TRIUR3_16803 Triticum urartu TRIUR3_16803 I 0.818
Traes_5BL_8BEF7F9CD Triticum aestivum Traes_5BL_8BEF7F9CD I 0.818
MLOC_4945 Hordeum vulgare MLOC_4945 I 0.818
Thhalv10000288m.g Eutrema salsugineum Thhalv10000288m.g I 0.818
TCM_027435 Theobroma cacao TCM_027435 I 0.818
TRIUR3_17960 Triticum urartu TRIUR3_17960 I 0.818
OBART09G10380 Oryza barthii OBART09G10380 I 0.817
ORUFI09G11140 Oryza rufipogon ORUFI09G11140 I 0.817
Traes_6AS_DA75BB1FD Triticum aestivum Traes_6AS_DA75BB1FD I 0.817
OB09G16960 Oryza brachyantha OB09G16960 I 0.817
cassava36924.valid.m1 Manihot esculenta cassava36924.valid.m1 I 0.817
GSMUA_Achr3G13440_001 Musa acuminata GSMUA_Achr3G13440_001 I 0.817
Pm005697 Prunus mume Pm005697 I 0.817
MTR_1g013790 Medicago truncatula MTR_1g013790 I 0.817
MLOC_60890 Hordeum vulgare MLOC_60890 I 0.817
WRKY40 Vitis vinifera VIT_09s0018g00240 I 0.817
LPERR09G07230 Leersia perrieri LPERR09G07230 I 0.817
Cla022703 Citrullus lanatus Cla022703 I 0.817
43951.m000016 Ricinus communis 43951.m000016 I 0.817
Traes_6DS_8F684013D Triticum aestivum Traes_6DS_8F684013D I 0.817
OGLUM09G10770 Oryza glumaepatula OGLUM09G10770 I 0.817
AC209050.3_FG003 Zea mays AC209050.3_FG003 I 0.817
SapurV1A.0280s0370 Salix purpurea SapurV1A.0280s0370 I 0.817
POPTR_0001s03620 Populus trichocarpa POPTR_0001s03620 I 0.817
Pavir.Bb02115 Panicum virgatum Pavir.Bb02115 I 0.817
Bra010220 Brassica rapa Bra010220 I 0.817
Pavir.Ba01849 Panicum virgatum Pavir.Ba01849 I 0.817
PK08451.1 Cannabis sativa PK08451.1 I 0.817
ORGLA09G0076400 Oryza glaberrima ORGLA09G0076400 I 0.817
PDK_20s1541671g001 Phoenix dactylifera PDK_20s1541671g001 I 0.817
AMTR_s00065p00201830 Amborella trichopoda AMTR_s00065p00201830 I 0.817
WRKY76 Oryza sativa OS09G0417600 I 0.817
PGSC0003DMG400019824 Solanum tuberosum PGSC0003DMG400019824 I 0.817
WRKY76 Oryza indica BGIOSGA029758 I 0.817
OPUNC09G08970 Oryza punctata OPUNC09G08970 I 0.817
PRUPE_ppa009939mg Prunus persica PRUPE_ppa009939mg I 0.817
GLYMA14G11920 Glycine max GLYMA14G11920 I 0.817
GLYMA15G00570 Glycine max GLYMA15G00570 I 0.817
GLYMA17G33891 Glycine max GLYMA17G33891 I 0.817
OMERI09G08210 Oryza meridionalis OMERI09G08210 I 0.817
GLYMA13G44730 Glycine max GLYMA13G44730 I 0.817
ONIVA09G10030 Oryza nivara ONIVA09G10030 I 0.817
Si030429m.g Setaria italica Si030429m.g I 0.817
Ciclev10026105m.g Citrus clementina Ciclev10026105m.g I 0.817
gene15013-v1.0-hybrid Fragaria vesca gene15013-v1.0-hybrid I 0.817
Sb02g024760 Sorghum bicolor Sb02g024760 I 0.816
Solyc08g067340.2 Solanum lycopersicum Solyc08g067340.2 I 0.816
TCM_036913 Theobroma cacao TCM_036913 I 0.816
cassava8446.m1 Manihot esculenta cassava8446.m1 I 0.816
orange1.1g020831m.g Citrus sinensis orange1.1g020831m.g I 0.816
Gorai.009G124000 Gossypium raimondii Gorai.009G124000 I 0.816
Gorai.009G062300 Gossypium raimondii Gorai.009G062300 I 0.816
Eucgr.C02660 Eucalyptus grandis Eucgr.C02660 I 0.816
Thhalv10018925m.g Eutrema salsugineum Thhalv10018925m.g I 0.816
Thhalv10025785m.g Eutrema salsugineum Thhalv10025785m.g I 0.816
LjT45M09.20.nd Lotus japonicus LjT45M09.20.nd I 0.816
chr1.CM0433.120.nd Lotus japonicus chr1.CM0433.120.nd I 0.816
PK20163.1 Cannabis sativa PK20163.1 I 0.816
Ciclev10008930m.g Citrus clementina Ciclev10008930m.g I 0.816
Carubv10005349m.g Capsella rubella Carubv10005349m.g I 0.816
mgf010377m Mimulus guttatus mgf010377m I 0.816
cassava37361.valid.m1 Manihot esculenta cassava37361.valid.m1 I 0.816
cassava20767.m1 Manihot esculenta cassava20767.m1 I 0.816
mgf019151m Mimulus guttatus mgf019151m I 0.816
Bostr.20129s0425 Boechera stricta Bostr.20129s0425 I 0.816
Cagra.3807s0050 Capsella grandiflora Cagra.3807s0050 I 0.816
Cagra.1725s0057 Capsella grandiflora Cagra.1725s0057 I 0.816
Bostr.7867s1032 Boechera stricta Bostr.7867s1032 I 0.816
VIT_04s0008g05760 Vitis vinifera VIT_04s0008g05760 I 0.816
Solyc03g116890.2 Solanum lycopersicum Solyc03g116890.2 I 0.816
Bra008435 Brassica rapa Bra008435 I 0.816
WRKY40 Arabidopsis lyrata fgenesh2_kg.2__2291__AT1G80840.1 I 0.816
GLYMA17G33920 Glycine max GLYMA17G33920 I 0.816
GLYMA14G11960 Glycine max GLYMA14G11960 I 0.816
Bra011299 Brassica rapa Bra011299 I 0.816
GRMZM2G057011 Zea mays GRMZM2G057011 I 0.816
Bra023983 Brassica rapa Bra023983 I 0.816
GRMZM2G125653 Zea mays GRMZM2G125653 I 0.816
Bra019123 Brassica rapa Bra019123 I 0.816
Bra003588 Brassica rapa Bra003588 I 0.816
Bo7g115410 Brassica oleracea Bo7g115410 I 0.816
MTR_2g105060 Medicago truncatula MTR_2g105060 I 0.816
GLYMA04G06495 Glycine max GLYMA04G06495 I 0.816
WRKY40 Arabidopsis thaliana AT1G80840 D 0.816
GLYMA06G06530 Glycine max GLYMA06G06530 I 0.816
Bo1g010960 Brassica oleracea Bo1g010960 I 0.816
Bo6g124190 Brassica oleracea Bo6g124190 I 0.816
Bo3g173640 Brassica oleracea Bo3g173640 I 0.816
Bo2g095640 Brassica oleracea Bo2g095640 I 0.816
Bra035148 Brassica rapa Bra035148 I 0.816
Cucsa.271570 Cucumis sativus Cucsa.271570 I 0.815
MLOC_70190 Hordeum vulgare MLOC_70190 I 0.815
MTR_1g013760 Medicago truncatula MTR_1g013760 I 0.815
Cla021335 Citrullus lanatus Cla021335 I 0.815
LPERR06G18970 Leersia perrieri LPERR06G18970 I 0.815
OS06G0649000 Oryza sativa OS06G0649000 I 0.815
GRMZM2G111711 Zea mays GRMZM2G111711 I 0.815
MDP0000228838 Malus domestica MDP0000228838 I 0.815
Pavir.J15967 Panicum virgatum Pavir.J15967 I 0.815
Pavir.Da00323 Panicum virgatum Pavir.Da00323 I 0.815
Pavir.J39636 Panicum virgatum Pavir.J39636 I 0.815
BGIOSGA020778 Oryza indica BGIOSGA020778 I 0.815
chr5.CM0040.670.nd Lotus japonicus chr5.CM0040.670.nd I 0.815
WRKY71 Oryza indica BGIOSGA007670 I 0.815
Pavir.Aa03147 Panicum virgatum Pavir.Aa03147 I 0.815
MDP0000263961 Malus domestica MDP0000263961 I 0.815
F775_13004 Aegilops tauschii F775_13004 I 0.815
F775_15894 Aegilops tauschii F775_15894 I 0.815
BRADI3G06070 Brachypodium distachyon BRADI3G06070 I 0.815
BRADI1G30870 Brachypodium distachyon BRADI1G30870 I 0.815
VIT_04s0008g05750 Vitis vinifera VIT_04s0008g05750 I 0.815
F775_19044 Aegilops tauschii F775_19044 I 0.815
mgf006734m Mimulus guttatus mgf006734m I 0.815
TRIUR3_25260 Triticum urartu TRIUR3_25260 I 0.815
OLONG_007261 Oryza longistaminata OLONG_007261 I 0.815
OMERI02G07060 Oryza meridionalis OMERI02G07060 I 0.815
OMERI06G22830 Oryza meridionalis OMERI06G22830 I 0.815
ONIVA02G07170 Oryza nivara ONIVA02G07170 I 0.815
OGLUM06G24120 Oryza glumaepatula OGLUM06G24120 I 0.815
OGLUM02G06150 Oryza glumaepatula OGLUM02G06150 I 0.815
Traes_7DL_B09854286 Triticum aestivum Traes_7DL_B09854286 I 0.815
Traes_7DL_5968FA56C Triticum aestivum Traes_7DL_5968FA56C I 0.815
OB06G30540 Oryza brachyantha OB06G30540 I 0.815
OBART02G06150 Oryza barthii OBART02G06150 I 0.815
ONIVA06G27040 Oryza nivara ONIVA06G27040 I 0.815
OPUNC02G05410 Oryza punctata OPUNC02G05410 I 0.815
ORGLA06G0191100 Oryza glaberrima ORGLA06G0191100 I 0.815
PGSC0003DMG402007388 Solanum tuberosum PGSC0003DMG402007388 I 0.815
ORUFI02G06290 Oryza rufipogon ORUFI02G06290 I 0.815
ORUFI06G24530 Oryza rufipogon ORUFI06G24530 I 0.815
ORGLA02G0057000 Oryza glaberrima ORGLA02G0057000 I 0.815
OPUNC06G20620 Oryza punctata OPUNC06G20620 I 0.815
Si017443m.g Setaria italica Si017443m.g I 0.815
Si006914m.g Setaria italica Si006914m.g I 0.815
Sb04g005520 Sorghum bicolor Sb04g005520 I 0.815
OPUNC02G05430 Oryza punctata OPUNC02G05430 I 0.815
Traes_7DL_B86B36F67 Triticum aestivum Traes_7DL_B86B36F67 I 0.815
OLONG_008502 Oryza longistaminata OLONG_008502 I 0.815
TRIUR3_24321 Triticum urartu TRIUR3_24321 I 0.815
OB02G15470 Oryza brachyantha OB02G15470 I 0.815
Traes_7DL_F849918EA Triticum aestivum Traes_7DL_F849918EA I 0.815
Carubv10023876m.g Capsella rubella Carubv10023876m.g I 0.814
Ca_02925 Cicer arietinum Ca_02925 I 0.814
LPERR02G05420 Leersia perrieri LPERR02G05420 I 0.814
BRADI4G30360 Brachypodium distachyon BRADI4G30360 I 0.814
Cagra.2381s0005 Capsella grandiflora Cagra.2381s0005 I 0.814
evm.TU.supercontig_10.75 Carica papaya evm.TU.supercontig_10.75 I 0.814
WRKY60 Arabidopsis lyrata fgenesh2_kg.4__412__AT2G25000.1 I 0.814
WRKY60 Arabidopsis thaliana AT2G25000 D 0.814
GRMZM2G120320 Zea mays GRMZM2G120320 I 0.814
Bostr.26326s0173 Boechera stricta Bostr.26326s0173 I 0.814
Bostr.0556s0495 Boechera stricta Bostr.0556s0495 I 0.814
SapurV1A.0184s0040 Salix purpurea SapurV1A.0184s0040 I 0.813
29848.m004545 Ricinus communis 29848.m004545 I 0.813
fgenesh1_pm.C_scaffold_7000774 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000774 I 0.813
Solyc06g068460.2 Solanum lycopersicum Solyc06g068460.2 I 0.813
OLONG_001234 Oryza longistaminata OLONG_001234 I 0.813
PGSC0003DMG400028520 Solanum tuberosum PGSC0003DMG400028520 I 0.813
Cucsa.162810 Cucumis sativus Cucsa.162810 I 0.813
POPTR_0006s27950 Populus trichocarpa POPTR_0006s27950 I 0.813
POPTR_0018s02470 Populus trichocarpa POPTR_0018s02470 I 0.813
Traes_7AL_AC56CC184 Triticum aestivum Traes_7AL_AC56CC184 I 0.813
Bo6g080740 Brassica oleracea Bo6g080740 I 0.812
GSMUA_Achr7G19340_001 Musa acuminata GSMUA_Achr7G19340_001 I 0.812
Cucsa.162820 Cucumis sativus Cucsa.162820 I 0.812
Sb10g025590 Sorghum bicolor Sb10g025590 I 0.811
MDP0000794439 Malus domestica MDP0000794439 I 0.811
Sb10g025600 Sorghum bicolor Sb10g025600 I 0.811
Ca_22917 Cicer arietinum Ca_22917 I 0.811
SapurV1A.0372s0180 Salix purpurea SapurV1A.0372s0180 I 0.811
LjSGA_046833.1 Lotus japonicus LjSGA_046833.1 I 0.811
SapurV1A.0153s0580 Salix purpurea SapurV1A.0153s0580 I 0.811
PRUPE_ppa010796mg Prunus persica PRUPE_ppa010796mg I 0.811
Lus10041660.g Linum usitatissimum Lus10041660.g I 0.811
Eucgr.F03955 Eucalyptus grandis Eucgr.F03955 I 0.811
GSMUA_Achr7G05200_001 Musa acuminata GSMUA_Achr7G05200_001 I 0.811
Gorai.010G118300 Gossypium raimondii Gorai.010G118300 I 0.811
GSMUA_Achr1G10080_001 Musa acuminata GSMUA_Achr1G10080_001 I 0.811
GLYMA07G02630 Glycine max GLYMA07G02630 I 0.811
Aquca_016_00214 Aquilegia coerulea Aquca_016_00214 I 0.811
GSMUA_Achr11G08290_001 Musa acuminata GSMUA_Achr11G08290_001 I 0.811
GLYMA08G23380 Glycine max GLYMA08G23380 I 0.811
Gorai.010G222400 Gossypium raimondii Gorai.010G222400 I 0.811
Pm013791 Prunus mume Pm013791 I 0.811
Lus10024074.g Linum usitatissimum Lus10024074.g I 0.811
Cucsa.177230 Cucumis sativus Cucsa.177230 I 0.811
Lus10026082.g Linum usitatissimum Lus10026082.g I 0.811
Lus10002309.g Linum usitatissimum Lus10002309.g I 0.811
MDP0000177906 Malus domestica MDP0000177906 I 0.811
LPERR09G07240 Leersia perrieri LPERR09G07240 I 0.810
MTR_4g007060 Medicago truncatula MTR_4g007060 I 0.810
PDK_20s1899311g001 Phoenix dactylifera PDK_20s1899311g001 I 0.810
mgf024657m Mimulus guttatus mgf024657m I 0.810
Ca_09101 Cicer arietinum Ca_09101 I 0.810
PRUPE_ppa008566mg Prunus persica PRUPE_ppa008566mg I 0.809
Pm005698 Prunus mume Pm005698 I 0.809
PDK_20s1368561g002 Phoenix dactylifera PDK_20s1368561g002 I 0.809
MDP0000307516 Malus domestica MDP0000307516 I 0.809
GSMUA_Achr7G16090_001 Musa acuminata GSMUA_Achr7G16090_001 I 0.809
GSMUA_Achr5G16460_001 Musa acuminata GSMUA_Achr5G16460_001 I 0.809
MDP0000689162 Malus domestica MDP0000689162 I 0.809
MDP0000418900 Malus domestica MDP0000418900 I 0.809
Pavir.Bb02124 Panicum virgatum Pavir.Bb02124 I 0.808
Pavir.Ba01850 Panicum virgatum Pavir.Ba01850 I 0.808
Sb02g024765 Sorghum bicolor Sb02g024765 I 0.808
GSMUA_Achr10G06050_001 Musa acuminata GSMUA_Achr10G06050_001 I 0.808
Si030794m.g Setaria italica Si030794m.g I 0.808
Cla017484 Citrullus lanatus Cla017484 I 0.808