cassava43001.valid.m1 (Manihot esculenta)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 cassava43001.valid.m1 T355532_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY28
M07406_2.00
Arabidopsis thaliana
HAAAGTCAAMNNH

DNNKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY28_col_a
0.875 0.828
WRKY28
M07407_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a
0.875 0.828
WRKY8
M02564_2.00
Arabidopsis thaliana
NRGTCAAHN

NDTTGACYN
PBM
Weirauch et al.(2014)
pTH7554
0.875 0.810
WRKY8
M07428_2.00
Arabidopsis thaliana
NAAAAGTCAACRNHW

WDNYGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a
0.875 0.810
WRKY8
M07429_2.00
Arabidopsis thaliana
NNVAAAGTCAACRNH

DNYGTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY8_col
0.875 0.810
WRKY48
M02565_2.00
Arabidopsis thaliana
NNVGTCADNN

NNHTGACBNN
PBM
Weirauch et al.(2014)
pTH7552
0.874 0.914
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN

NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.867 0.810
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN

NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.860 0.810
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG

CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.859 0.828
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM

KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.859 0.828
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN

NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.849 0.724
WRKY65
M07372_2.00
Arabidopsis thaliana
NWWAGTCAACG

CGTTGACTWWN
Dap-seq
OMalley et al.(2016)
WRKY65_col_a
0.843 0.586
WRKY65
M07373_2.00
Arabidopsis thaliana
NAAAGTCAACGN

NCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a
0.843 0.586
WRKY27
M02566_2.00
Arabidopsis thaliana
NNGTCHDNN

NNHDGACNN
PBM
Weirauch et al.(2014)
pTH8188
0.841 0.621
WRKY27
M07430_2.00
Arabidopsis thaliana
MAAAGTCAACKNH

DNMGTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY27_col_a
0.841 0.621
WRKY27
M07431_2.00
Arabidopsis thaliana
HAAAGTCAACKNH

DNMGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY27_colamp_a
0.841 0.621
WRKY21
M02553_2.00
Arabidopsis thaliana
NNRGTCAAMN

NKTTGACYNN
PBM
Weirauch et al.(2014)
pTH7422
0.840 0.586
WRKY21
M07389_2.00
Arabidopsis thaliana
HAAAGTCAACNNH

DNNGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a
0.840 0.586
WRKY21
M07390_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_col
0.840 0.586
WRKY14
M00731_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Chang et al.(2013)
pTH7570
0.836 0.569
WRKY14
M07375_2.00
Arabidopsis thaliana
NAAAGTCAACGNN

NNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_col_a
0.836 0.569
WRKY14
M07376_2.00
Arabidopsis thaliana
NAAAGTCAACGNH

DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_colamp_a
0.836 0.569
WRKY75
M02562_2.00
Arabidopsis thaliana
NRGTCAAM

KTTGACYN
PBM
Weirauch et al.(2014)
pTH8821
0.833 0.724
WRKY75
M07420_2.00
Arabidopsis thaliana
NAAAGTCAACGNH

DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY75_col_a
0.833 0.724
WRKY75
M07421_2.00
Arabidopsis thaliana
VAAAGTCAACRNH

DNYGTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY75_colamp_a
0.833 0.724
WRKY22
M02557_2.00
Arabidopsis thaliana
NNNKTMHDNN

NNHDKAMNNN
PBM
Weirauch et al.(2014)
pTH7320
0.831 0.534
WRKY22
M07400_2.00
Arabidopsis thaliana
AAAAGTCAACKNH

DNMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a
0.831 0.534
WRKY22
M07401_2.00
Arabidopsis thaliana
NAAAGTCAACKNH

DNMGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY22_col
0.831 0.534
WRKY45
M00899_2.00
Arabidopsis thaliana
NNRGTCAAMGN

NCKTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY45
0.831 0.707
WRKY45
M07397_2.00
Arabidopsis thaliana
NAAAAGTCAAMD

HKTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY45_col_a
0.831 0.707
WRKY45
M07398_2.00
Arabidopsis thaliana
MAAAGTCAAMV

BKTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY45_colamp_a
0.831 0.707
Q40828_PETCR
M11467_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY_Q2
0.829 0.552
WRKY43
M02555_2.00
Arabidopsis thaliana
NRGTCAAHNN

NNDTTGACYN
PBM
Weirauch et al.(2014)
pTH7373
0.828 0.724
WRKY43
M07393_2.00
Arabidopsis thaliana
NNAAAGTCAACGNN

NNCGTTGACTTTNN
Dap-seq
OMalley et al.(2016)
WRKY43_col_a
0.828 0.724
WRKY43
M07394_2.00
Arabidopsis thaliana
NNNNAAAGTCAACGN

NCGTTGACTTTNNNN
Dap-seq
OMalley et al.(2016)
WRKY43_colamp_a
0.828 0.724
WRKY11
M02559_2.00
Arabidopsis thaliana
NDGTCAAHNN

NNDTTGACHN
PBM
Weirauch et al.(2014)
pTH8091
0.825 0.534
WRKY11
M07415_2.00
Arabidopsis thaliana
NHAAAGTCAACBNH

DNVGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY11_col_a
0.825 0.534
WRKY11
M11464_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY11_Q2
0.825 0.534
WRKY29
M02558_2.00
Arabidopsis thaliana
NNNGTCHDNN

NNHDGACNNN
PBM
Weirauch et al.(2014)
pTH9604
0.825 0.534
WRKY29
M07410_2.00
Arabidopsis thaliana
HAAAGTCAACK

MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY29_col_a
0.825 0.534
WRKY29
M07411_2.00
Arabidopsis thaliana
HWWAGTCAAMDNN

NNHKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a
0.825 0.534
WRKY17
M02550_2.00
Arabidopsis thaliana
NNDGTCAAHN

NDTTGACHNN
PBM
Weirauch et al.(2014)
pTH8088
0.825 0.534
WRKY17
M07385_2.00
Arabidopsis thaliana
NHAAAGTCAACRNN

NNYGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY17_col_a
0.825 0.534
WRKY17
M07386_2.00
Arabidopsis thaliana
NMAAAGTCAACGN

NCGTTGACTTTKN
Dap-seq
OMalley et al.(2016)
WRKY17_colamp_a
0.825 0.534
WRKY15
M02549_2.00
Arabidopsis thaliana
NRGTCAAMNN

NNKTTGACYN
PBM
Weirauch et al.(2014)
pTH7602
0.823 0.534
WRKY15
M07383_2.00
Arabidopsis thaliana
AAAAGTCAACKN

NMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY15_colamp_a
0.823 0.534
WRKY15
M07384_2.00
Arabidopsis thaliana
NWAAGTCAACB

VGTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY15_col_b
0.823 0.534
WRKY24
M07426_2.00
Arabidopsis thaliana
NNNAWAGTCAACGN

NCGTTGACTWTNNN
Dap-seq
OMalley et al.(2016)
WRKY24_col_a
0.823 0.690
WRKY24
M07427_2.00
Arabidopsis thaliana
NAWAGTCAACGNH

DNCGTTGACTWTN
Dap-seq
OMalley et al.(2016)
WRKY24_colamp_a
0.823 0.690
WRKY12
M00898_2.00
Arabidopsis thaliana
NHGGTCAACNN

NNGTTGACCDN
PBM
Franco-Zorrilla et al.(2014)
WRKY12
0.821 0.724
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN

NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.820 0.655
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN

NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.820 0.655
WRKY7
M07412_2.00
Arabidopsis thaliana
NNDDDNNNNMAAAGTCAACGV

BCGTTGACTTTKNNNNHHHNN
Dap-seq
OMalley et al.(2016)
WRKY7_colamp_a
0.819 0.517
WRKY7
M07413_2.00
Arabidopsis thaliana
NAAAAGTCAACKNN

NNMGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY7_col
0.819 0.517
PK25870.1
M01325_2.00
Cannabis sativa
NRGTCAAM

KTTGACYN
PBM
Lambert et al.(2019)
pTH10156
0.818 0.655
fgenesh1_pg.C_Chr_11.0001000193
M02570_2.00
Ostreococcus tauri
NRGTCARNN

NNYTGACYN
PBM
Weirauch et al.(2014)
pTH9432
0.814 0.586
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava43001.valid.m1 WRKY 167 224

Links

Other WRKY family TFs
Other Manihot esculenta TFs

2219 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK07402.1 Cannabis sativa PK07402.1 D 0.000
DREB2D Arabidopsis thaliana AT1G75490 D 0.000
DREB2F Arabidopsis thaliana AT3G57600 D 0.000
DREB2G Arabidopsis thaliana AT5G18450 D 0.000
PK08602.1 Cannabis sativa PK08602.1 D 0.000
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.000
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.000
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.000
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.000
Si002067m.g Setaria italica Si002067m.g I 0.000
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.000
mgf017629m Mimulus guttatus mgf017629m I 0.000
mgf024545m Mimulus guttatus mgf024545m I 0.000
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.000
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.000
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.000
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.000
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.000
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.000
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.000
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.000
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.000
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.000
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.000
TCM_024756 Theobroma cacao TCM_024756 I 0.000
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.000
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.000
Ca_07264 Cicer arietinum Ca_07264 I 0.000
Cla006713 Citrullus lanatus Cla006713 I 0.000
Cla012194 Citrullus lanatus Cla012194 I 0.000
Cla017778 Citrullus lanatus Cla017778 I 0.000
Pm003634 Prunus mume Pm003634 I 0.000
Pm025865 Prunus mume Pm025865 I 0.000
27810.m000639 Ricinus communis 27810.m000639 I 0.000
30170.m014115 Ricinus communis 30170.m014115 I 0.000
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.000
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.000
MDP0000871361 Malus domestica MDP0000871361 I 0.000
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.000
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.000
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.000
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.000
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.000
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.000
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.000
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.000
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.000
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.000
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.000
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.000
MDP0000703626 Malus domestica MDP0000703626 I 0.000
MDP0000250927 Malus domestica MDP0000250927 I 0.000
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.000
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.000
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.000
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.000
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.000
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.000
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.000
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.000
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.000
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.000
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.000
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.000
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.000
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.000
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.000
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.000
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.000
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.000
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.000
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.000
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.000
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.000
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.000
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.000
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.000
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.000
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.000
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.000
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.000
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.000
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.000
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.000
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.000
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.000
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.000
Bo4g111040 Brassica oleracea Bo4g111040 I 0.000
Bo6g073020 Brassica oleracea Bo6g073020 I 0.000
Bo6g086320 Brassica oleracea Bo6g086320 I 0.000
Bo6g119660 Brassica oleracea Bo6g119660 I 0.000
Bo8g092010 Brassica oleracea Bo8g092010 I 0.000
Bo9g155940 Brassica oleracea Bo9g155940 I 0.000
Bra002159 Brassica rapa Bra002159 I 0.000
Bra003752 Brassica rapa Bra003752 I 0.000
Bra007341 Brassica rapa Bra007341 I 0.000
Bra014617 Brassica rapa Bra014617 I 0.000
Bra015840 Brassica rapa Bra015840 I 0.000
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.000
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.000
DREB2E Oryza sativa OS03G0174400 I 0.000
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.000
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.000
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.000
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.000
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.000
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.000
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.000
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.000
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.000
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.000
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.000
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.000
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.000
DREB2A Oryza sativa OS01G0165000 I 0.000
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.000
OB01G13930 Oryza brachyantha OB01G13930 I 0.000
OBART01G04210 Oryza barthii OBART01G04210 I 0.000
OBART03G05550 Oryza barthii OBART03G05550 I 0.000
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.000
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.000
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.000
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.000
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.000
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.000
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.000
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.000
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.000
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.000
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.000
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.000