CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.101530
(
Cucumis sativus
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Cucsa.101530
T355587_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK25870.1
M01325_2.00
Cannabis sativa
NRGTCAAM
KTTGACYN
PBM
Lambert et al.(2019)
pTH10156
0.869
0.914
WRKY51
M02568_2.00
Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN
PBM
Weirauch et al.(2014)
pTH7478
0.852
0.828
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN
NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.847
0.845
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN
NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.847
0.845
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN
NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.827
0.621
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN
NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.822
0.655
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN
NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.821
0.655
WRKY28
M07406_2.00
Arabidopsis thaliana
HAAAGTCAAMNNH
DNNKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY28_col_a
0.820
0.638
WRKY28
M07407_2.00
Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a
0.820
0.638
WRKY8
M02564_2.00
Arabidopsis thaliana
NRGTCAAHN
NDTTGACYN
PBM
Weirauch et al.(2014)
pTH7554
0.820
0.621
WRKY8
M07428_2.00
Arabidopsis thaliana
NAAAAGTCAACRNHW
WDNYGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a
0.820
0.621
WRKY8
M07429_2.00
Arabidopsis thaliana
NNVAAAGTCAACRNH
DNYGTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY8_col
0.820
0.621
WRKY48
M02565_2.00
Arabidopsis thaliana
NNVGTCADNN
NNHTGACBNN
PBM
Weirauch et al.(2014)
pTH7552
0.820
0.672
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG
CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.816
0.621
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM
KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.816
0.621
WRKY24
M07426_2.00
Arabidopsis thaliana
NNNAWAGTCAACGN
NCGTTGACTWTNNN
Dap-seq
OMalley et al.(2016)
WRKY24_col_a
0.815
0.603
WRKY24
M07427_2.00
Arabidopsis thaliana
NAWAGTCAACGNH
DNCGTTGACTWTN
Dap-seq
OMalley et al.(2016)
WRKY24_colamp_a
0.815
0.603
WRKY15
M02549_2.00
Arabidopsis thaliana
NRGTCAAMNN
NNKTTGACYN
PBM
Weirauch et al.(2014)
pTH7602
0.814
0.621
WRKY15
M07383_2.00
Arabidopsis thaliana
AAAAGTCAACKN
NMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY15_colamp_a
0.814
0.621
WRKY15
M07384_2.00
Arabidopsis thaliana
NWAAGTCAACB
VGTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY15_col_b
0.814
0.621
Q40828_PETCR
M11467_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY_Q2
0.813
0.603
WRKY43
M02555_2.00
Arabidopsis thaliana
NRGTCAAHNN
NNDTTGACYN
PBM
Weirauch et al.(2014)
pTH7373
0.813
0.603
WRKY43
M07393_2.00
Arabidopsis thaliana
NNAAAGTCAACGNN
NNCGTTGACTTTNN
Dap-seq
OMalley et al.(2016)
WRKY43_col_a
0.813
0.603
WRKY43
M07394_2.00
Arabidopsis thaliana
NNNNAAAGTCAACGN
NCGTTGACTTTNNNN
Dap-seq
OMalley et al.(2016)
WRKY43_colamp_a
0.813
0.603
WRKY45
M00899_2.00
Arabidopsis thaliana
NNRGTCAAMGN
NCKTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY45
0.811
0.586
WRKY45
M07397_2.00
Arabidopsis thaliana
NAAAAGTCAAMD
HKTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY45_col_a
0.811
0.586
WRKY45
M07398_2.00
Arabidopsis thaliana
MAAAGTCAAMV
BKTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY45_colamp_a
0.811
0.586
WRKY7
M07412_2.00
Arabidopsis thaliana
NNDDDNNNNMAAAGTCAACGV
BCGTTGACTTTKNNNNHHHNN
Dap-seq
OMalley et al.(2016)
WRKY7_colamp_a
0.810
0.603
WRKY7
M07413_2.00
Arabidopsis thaliana
NAAAAGTCAACKNN
NNMGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY7_col
0.810
0.603
WRKY17
M02550_2.00
Arabidopsis thaliana
NNDGTCAAHN
NDTTGACHNN
PBM
Weirauch et al.(2014)
pTH8088
0.810
0.569
WRKY17
M07385_2.00
Arabidopsis thaliana
NHAAAGTCAACRNN
NNYGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY17_col_a
0.810
0.569
WRKY17
M07386_2.00
Arabidopsis thaliana
NMAAAGTCAACGN
NCGTTGACTTTKN
Dap-seq
OMalley et al.(2016)
WRKY17_colamp_a
0.810
0.569
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.101530.1
WRKY
84
141
DDGFKWRKYGKKSVKNSPHPRNYYKCSSGECGVKKRVERDRDDSSYVITTYEGVHNHE
Links
Other
WRKY
family TFs
Other
Cucumis sativus
TFs
1083 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy